Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 1.9e-65 252.3 123 100.0
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 2.0e-54 215.7 115 93.9
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 1.3e-48 196.4 112 86.6
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 2.4e-44 182.2 112 78.6
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 2.0e-38 162.5 108 70.4
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 1.4e-36 156.4 117 63.2
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 6.0e-35 151.0 108 65.7
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 2.3e-34 149.1 108 63.9
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 2.3e-34 149.1 107 66.4
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 3.9e-34 148.3 108 64.8
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 6.7e-34 147.5 108 62.0
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 6.7e-34 147.5 108 63.9
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 6.7e-34 147.5 109 62.4
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 8.7e-34 147.1 108 65.7
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 1.1e-33 146.7 108 67.6
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 1.5e-33 146.4 108 63.0
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 1.9e-33 146.0 108 63.0
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 3.3e-33 145.2 107 64.5
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 4.3e-33 144.8 108 63.0
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 4.3e-33 144.8 109 62.4
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 5.6e-33 144.4 109 60.6
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 7.4e-33 144.1 110 60.0
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 7.4e-33 144.1 110 60.0
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 1.3e-32 143.3 107 61.7
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 1.6e-32 142.9 107 65.4
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.6e-32 142.9 110 60.0
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 2.1e-32 142.5 106 64.2
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 2.1e-32 142.5 109 60.6
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 3.7e-32 141.7 113 58.4
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 4.8e-32 141.4 109 58.7
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 6.2e-32 141.0 108 61.1
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 6.2e-32 141.0 106 63.2
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 8.2e-32 140.6 105 62.9
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 1.1e-31 140.2 111 58.6
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 1.1e-31 140.2 111 58.6
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 1.1e-31 140.2 108 58.3
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 2.4e-31 139.0 108 61.1
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 3.1e-31 138.7 107 60.7
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 4.0e-31 138.3 108 62.0
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 5.3e-31 137.9 110 57.3
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 1.5e-30 136.3 109 60.6
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 2.0e-30 136.0 108 59.3
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 3.4e-30 135.2 109 56.9
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 4.5e-30 134.8 112 62.5
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 4.5e-30 134.8 112 62.5
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 4.5e-30 134.8 106 64.2
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 4.5e-30 134.8 108 58.3
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 5.8e-30 134.4 110 58.2
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 1.0e-29 133.7 106 57.5
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 1.0e-29 133.7 106 61.3
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 1.3e-29 133.3 106 57.5
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 1.7e-29 132.9 113 54.0
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 4.9e-29 131.3 106 57.5
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 6.5e-29 131.0 108 57.4
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 8.4e-29 130.6 106 61.3
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 1.1e-28 130.2 105 60.0
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 1.1e-28 130.2 99 63.6
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 1.4e-28 129.8 112 55.4
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 1.4e-28 129.8 108 58.3
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 1.9e-28 129.4 106 59.4
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 2.5e-28 129.0 110 56.4
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 4.2e-28 128.3 109 55.0
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 7.1e-28 127.5 106 58.5
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 1.2e-27 126.7 106 55.7
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 1.2e-27 126.7 106 55.7
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 1.2e-27 126.7 113 55.8
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 1.6e-27 126.3 110 54.5
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 2.1e-27 125.9 106 55.7
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 2.1e-27 125.9 106 55.7
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 2.1e-27 125.9 106 55.7
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 2.7e-27 125.6 107 57.0
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 4.6e-27 124.8 106 54.7
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 4.6e-27 124.8 106 54.7
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 6.0e-27 124.4 106 54.7
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 6.0e-27 124.4 106 59.4
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 6.0e-27 124.4 109 54.1
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.0e-26 123.6 108 56.5
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 3.0e-26 122.1 106 56.6
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 3.0e-26 122.1 105 59.0
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 5.1e-26 121.3 105 59.0
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 1.5e-25 119.8 117 52.1
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 2.5e-25 119.0 106 53.8
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 2.5e-25 119.0 104 57.7
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 5.7e-25 117.9 86 61.6
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 7.4e-25 117.5 110 53.6
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 9.7e-25 117.1 106 52.8
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 2.8e-24 115.5 106 52.8
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 3.7e-24 115.2 102 57.8
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 6.3e-24 114.4 111 50.5
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.4e-23 113.2 99 59.6
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 5.3e-23 111.3 107 54.2
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 5.3e-23 111.3 117 48.7
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 5.3e-23 111.3 104 55.8
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 5.9e-22 107.8 70 71.4
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 3.8e-21 105.1 105 45.7
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.4e-18 96.7 65 70.8
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 3.9e-18 95.1 65 70.8
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 1.5e-17 93.2 67 65.7
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 1.9e-17 92.8 65 67.7
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 2.2e-16 89.4 105 43.8
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 6.3e-16 87.8 108 45.4
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 1.4e-15 86.7 104 42.3
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 1.2e-14 83.6 106 38.7
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 2.2e-08 62.8 67 41.8
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 8.2e-08 60.8 38 73.7


User provided reference genes

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