Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C032600.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.4e-43 179.1 85 100.0
MELO3C032792.2 Cucumis melo HOM05D007230 ORTHO05D004756 9.6e-40 166.4 85 94.1
MELO3C030889.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.3e-39 166.0 86 94.2
MELO3C031197.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.3e-39 166.0 85 94.1
MELO3C029660.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.4e-38 161.8 85 91.8
MELO3C031511.2 Cucumis melo HOM05D007230 ORTHO05D004756 9.0e-38 159.8 85 89.4
MELO3C029643.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.7e-36 155.6 85 90.6
MELO3C029711.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.8e-36 154.5 85 87.1
MELO3C033490.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.2e-35 151.4 83 86.7
MELO3C029746.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.9e-33 144.4 76 88.2
MELO3C029164.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.5e-32 141.7 73 93.2
MELO3C030315.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.3e-32 141.4 89 73.0
MELO3C029851.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.2e-29 132.9 73 87.7
MELO3C031996.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.9e-28 127.5 105 60.0
MELO3C033487.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.1e-26 122.1 97 62.9
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 2.7e-26 121.7 84 64.3
Psat0ss2585g0560 Pisum sativum HOM05D007230 ORTHO05D004756 1.8e-25 119.0 84 63.1
Psat2g117040 Pisum sativum HOM05D007230 ORTHO05D004756 3.9e-25 117.9 85 63.5
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 5.1e-25 117.5 84 61.9
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.1e-24 116.3 83 59.0
Psat5g083840 Pisum sativum HOM05D007230 ORTHO05D004756 1.9e-24 115.5 84 60.7
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.3e-24 114.4 83 59.0
Psat0s1792g0040 Pisum sativum HOM05D000659 ORTHO05D000505 9.6e-24 113.2 84 60.7
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.1e-23 112.1 83 56.6
Psat5g096800 Pisum sativum HOM05D007230 ORTHO05D004756 2.8e-23 111.7 78 64.1
Psat0ss1196g0040 Pisum sativum HOM05D007230 ORTHO05D004756 3.7e-23 111.3 84 59.5
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 6.2e-23 110.5 83 55.4
MELO3C033139.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.1e-22 109.8 95 54.7
MELO3C030814.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.8e-22 109.0 60 86.7
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.1e-22 108.2 83 54.2
Rhsim05G0139800 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.0e-22 107.8 79 59.5
Rhsim12G0049700 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.3e-22 107.5 83 53.0
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 4.2e-19 97.8 82 53.7
Rhsim12G0018900 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.6e-18 94.4 70 60.0
CSS0041454 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.9e-17 91.3 84 41.7
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 6.7e-17 90.5 82 48.8
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 8.7e-17 90.1 86 47.7
Psat4g177800 Pisum sativum HOM05D007230 ORTHO05D004756 1.9e-16 89.0 66 60.6
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 1.9e-16 89.0 86 47.7
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 2.5e-16 88.6 86 46.5
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 2.5e-16 88.6 86 48.8
Psat1g072080 Pisum sativum HOM05D007230 ORTHO05D004756 4.3e-16 87.8 70 57.1
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 9.7e-16 86.7 86 46.5
Rhsim10G0179600 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.1e-14 81.3 56 58.9
CSS0042171 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.3e-14 80.9 58 58.6
MELO3C032119.2 Cucumis melo HOM05D007230 ORTHO05D004756 9.0e-14 80.1 47 83.0
CSS0001150 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.5e-13 79.3 58 58.6
CSS0018761 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.5e-13 79.3 58 58.6
CSS0002016 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.6e-13 78.6 55 60.0
CSS0009610 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 7.7e-13 77.0 58 58.6
QL03p000720 Quercus lobata HOM05D000002 ORTHO05D000001 7.7e-13 77.0 96 43.8
CSS0046979 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.0e-12 76.6 58 58.6
CSS0047666 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.3e-12 76.3 55 60.0
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-12 76.3 93 41.9
QL04p089373 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-12 76.3 97 41.2
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.7e-12 75.9 63 54.0
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.7e-12 75.9 63 54.0
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.7e-12 75.9 63 54.0
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.7e-12 75.9 63 54.0
QL01p026368 Quercus lobata HOM05D000002 ORTHO05D000001 1.7e-12 75.9 94 41.5
QL11p002299 Quercus lobata HOM05D000002 ORTHO05D000001 1.7e-12 75.9 94 41.5
CSS0025354 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.2e-12 75.5 55 58.2
CSS0035882 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.2e-12 75.5 55 58.2
QL11p048818 Quercus lobata HOM05D000002 ORTHO05D000001 2.9e-12 75.1 94 40.4
SHI30625 Sapria himalayana HOM05D007230 ORTHO05D004756 6.5e-12 73.9 83 45.8
PSO339G5468 Papaver somniferum HOM05D007230 ORTHO05D004756 3.2e-11 71.6 81 42.0
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 9.4e-11 70.1 84 39.3
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 1.2e-10 69.7 81 39.5
PSO170G1977 Papaver somniferum HOM05D000002 ORTHO05D000001 2.7e-10 68.6 81 37.0
Psat1g057080 Pisum sativum HOM05D007230 ORTHO05D004756 6.1e-10 67.4 52 55.8
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 7.9e-10 67.0 86 40.7
PSO478G2157 Papaver somniferum HOM05D007230 ORTHO05D004756 1.0e-09 66.6 84 36.9
PSO339G3339 Papaver somniferum HOM05D007230 ORTHO05D004756 3.0e-09 65.1 78 38.5
CSS0009938 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.9e-09 64.7 55 50.9
QL09p045529 Quercus lobata HOM05D000002 ORTHO05D000001 3.9e-09 64.7 55 52.7
MD02G1156200 Malus domestica HOM05D000002 ORTHO05D004756 8.8e-09 63.5 75 38.7
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 2.5e-08 62.0 76 36.8
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-08 62.0 75 36.0
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 4.3e-08 61.2 79 34.2
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 5.7e-08 60.8 68 39.7
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-08 60.8 68 39.7
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 7.4e-08 60.5 68 39.7
CSS0049413 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 9.7e-08 60.1 56 51.8
SHI31375 Sapria himalayana HOM05D007230 ORTHO05D004756 9.7e-08 60.1 68 39.7
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 1.3e-07 59.7 68 39.7
PSO782G2577 Papaver somniferum HOM05D000002 ORTHO05D004756 1.7e-07 59.3 76 35.5
CSS0008768 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 2.2e-07 58.9 68 33.8
PSO754G0013 Papaver somniferum HOM05D007230 ORTHO05D004756 2.8e-07 58.5 76 35.5
QL05p073015 Quercus lobata HOM05D000002 ORTHO05D000001 2.8e-07 58.5 69 43.5
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 4.8e-07 57.8 68 38.2
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 1.1e-06 56.6 76 40.8
Thecc.10G160200 Theobroma cacao HOM05D000002 ORTHO05D000001 1.4e-06 56.2 82 30.5
Cfa012990 Carpinus fangiana HOM05D000097 ORTHO05D009232 6.9e-06 53.9 80 28.8


User provided reference genes

Program Settings