Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C032594.2 Cucumis melo HOM05D000065 ORTHO05D020526 1.2e-36 156.0 76 100.0
MELO3C016279.2 Cucumis melo HOM05D000065 ORTHO05D020526 2.7e-25 118.2 68 85.3
MELO3C032591.2 Cucumis melo HOM05D000065 ORTHO05D020526 1.0e-24 116.3 68 83.8
MELO3C032592.2 Cucumis melo HOM05D000065 ORTHO05D020526 1.0e-24 116.3 68 83.8
MELO3C032595.2 Cucumis melo HOM05D000065 ORTHO05D020526 4.7e-22 107.5 54 96.3
MELO3C032590.2 Cucumis melo HOM05D000065 ORTHO05D020526 1.4e-21 105.9 57 91.2
MELO3C016472.2 Cucumis melo HOM05D000065 ORTHO05D007307 7.3e-15 83.6 47 83.0
CsaV3_3G020460 Cucumis sativus L. HOM05D000065 ORTHO05D007307 2.1e-14 82.0 47 80.9
Sed0019294 Sechium edule HOM05D000065 ORTHO05D007307 1.4e-13 79.3 48 77.1
ClCG07G011520 Citrullus lanatus HOM05D000065 ORTHO05D007307 2.0e-12 75.5 44 81.8
QL02p030133 Quercus lobata HOM05D000065 ORTHO05D007307 5.8e-12 73.9 48 68.8
CiPaw.12G081700 Carya illinoinensis HOM05D000065 ORTHO05D007307 1.3e-11 72.8 47 70.2
Prupe.5G122000 Prunus persica HOM05D000065 ORTHO05D007307 2.2e-11 72.0 46 65.2
Cc08_g16200 Coffea canephora HOM05D000065 ORTHO05D007307 2.9e-11 71.6 47 68.1
AUR62010855 Chenopodium quinoa HOM05D000065 ORTHO05D007307 6.4e-11 70.5 46 65.2
Dinv37520 Davidia involucrata HOM05D000065 ORTHO05D007307 6.4e-11 70.5 47 66.0
Oeu055030.1 Olea europaea HOM05D000065 ORTHO05D007307 6.4e-11 70.5 47 66.0
Potri.007G062342 Populus trichocarpa HOM05D000065 ORTHO05D007307 8.4e-11 70.1 47 63.8
MSTRG.25688 Avicennia marina HOM05D000065 ORTHO05D007307 1.4e-10 69.3 47 66.0
AUR62019853 Chenopodium quinoa HOM05D000065 ORTHO05D007307 1.4e-10 69.3 46 63.0
Nn3g18990 Nelumbo nucifera HOM05D000065 ORTHO05D007307 1.9e-10 68.9 45 68.9
FvH4_5g04800 Fragaria vesca HOM05D000065 ORTHO05D007307 2.4e-10 68.6 45 68.9
FAN04G1997 Fragaria x ananassa HOM05D000065 ORTHO05D007307 2.4e-10 68.6 45 68.9
FAN08G1908 Fragaria x ananassa HOM05D000065 ORTHO05D007307 2.4e-10 68.6 45 68.9
FAN13G2620 Fragaria x ananassa HOM05D000065 ORTHO05D007307 2.4e-10 68.6 45 68.9
FAN18G4505 Fragaria x ananassa HOM05D000065 ORTHO05D007307 2.4e-10 68.6 45 68.9
Ciclev10023992m.g Citrus clementina HOM05D000065 ORTHO05D007307 3.2e-10 68.2 47 63.8
CAN.G1804.17 Capsicum annuum HOM05D000065 ORTHO05D007307 4.1e-10 67.8 47 63.8
Haze_09082 Corylus avellana HOM05D000065 ORTHO05D007307 4.1e-10 67.8 47 61.7
Medtr5g009100 Medicago truncatula HOM05D000065 ORTHO05D007307 4.1e-10 67.8 47 66.0
Phvul.002G165200 Phaseolus vulgaris HOM05D000065 ORTHO05D007307 4.1e-10 67.8 47 66.0
Cpa.g.sc571.1 Carica papaya HOM05D000065 ORTHO05D007307 5.4e-10 67.4 47 61.7
COL.COLO4_10716 Corchorus olitorius HOM05D000065 ORTHO05D007307 5.4e-10 67.4 47 61.7
Duzib205G1871 Durio zibethinus HOM05D000065 ORTHO05D007307 5.4e-10 67.4 47 66.0
Eucgr.D01753 Eucalyptus grandis HOM05D000065 ORTHO05D007307 5.4e-10 67.4 46 67.4
CARHR255660 Cardamine hirsuta HOM05D000065 ORTHO05D007307 7.1e-10 67.0 47 63.8
Potri.003G141300 Populus trichocarpa HOM05D000065 ORTHO05D007307 7.1e-10 67.0 47 59.6
SGA_v2.0_scaffold96G29026 Striga asiatica HOM05D000065 ORTHO05D007307 7.1e-10 67.0 58 58.6
BcaB01g01565 Brassica carinata HOM05D000065 ORTHO05D007307 9.2e-10 66.6 48 60.4
BcaC04g21089 Brassica carinata HOM05D000065 ORTHO05D007307 9.2e-10 66.6 48 60.4
A09p28260 Brassica napus HOM05D000065 ORTHO05D007307 9.2e-10 66.6 48 60.4
C09p35820 Brassica napus HOM05D000065 ORTHO05D007307 9.2e-10 66.6 48 60.4
BolC9t56416H Brassica oleracea HOM05D000065 ORTHO05D007307 9.2e-10 66.6 48 60.4
BraA09t38395Z Brassica rapa HOM05D000065 ORTHO05D007307 9.2e-10 66.6 48 60.4
RcHm_v2.0_Chr7g0194451 Rosa chinensis HOM05D000065 ORTHO05D007307 9.2e-10 66.6 45 66.7
VMungo1215G2791 Vigna mungo HOM05D000065 ORTHO05D007307 9.2e-10 66.6 47 66.0
GSVIVG01019553001 Vitis vinifera HOM05D000065 ORTHO05D007307 9.2e-10 66.6 47 66.0
Thhalv10028704m.g Eutrema salsugineum HOM05D000065 ORTHO05D007307 1.2e-09 66.2 48 58.3
Glyma.01G226300 Glycine max HOM05D000065 ORTHO05D007307 1.2e-09 66.2 47 66.0
Lj5g0026493 Lotus japonicus HOM05D000065 ORTHO05D007307 1.2e-09 66.2 47 66.0
PGSC0003DMG400012140 Solanum tuberosum HOM05D000065 ORTHO05D007307 1.2e-09 66.2 47 63.8
Sp6g06540 Schrenkiella parvula HOM05D000065 ORTHO05D007307 1.6e-09 65.9 48 60.4
Thecc.03G300000 Theobroma cacao HOM05D000065 ORTHO05D007307 1.6e-09 65.9 45 66.7
Actinidia27313 Actinidia chinensis HOM05D000065 ORTHO05D007307 2.1e-09 65.5 47 63.8
AT4G10950 Arabidopsis thaliana HOM05D000065 ORTHO05D007307 2.1e-09 65.5 48 58.3
MD06G1109100 Malus domestica HOM05D000065 ORTHO05D007307 2.1e-09 65.5 48 60.4
Peaxi162Scf00111g00716 Petunia axillaris HOM05D000065 ORTHO05D007307 2.1e-09 65.5 47 61.7
Aa31LG9G11180 Aethionema arabicum HOM05D000906 ORTHO05D007307 2.7e-09 65.1 47 59.6
Ah.04g153110 Amaranthus hybridus HOM05D000065 ORTHO05D007307 2.7e-09 65.1 52 55.8
CSS0002698 Camellia sinensis var. sinensis HOM05D000065 ORTHO05D007307 2.7e-09 65.1 47 61.7
CSS0031016 Camellia sinensis var. sinensis HOM05D000065 ORTHO05D007307 2.7e-09 65.1 47 61.7
Migut.A00627 Erythranthe guttata HOM05D000065 ORTHO05D007307 2.7e-09 65.1 47 63.8
MBI06_g41629_MAGBIO Magnolia biondii HOM05D000065 ORTHO05D007307 2.7e-09 65.1 45 60.0
MBI06_g46248_MAGBIO Magnolia biondii HOM05D000065 ORTHO05D007307 2.7e-09 65.1 45 60.0
Sopen08g030740 Solanum pennellii HOM05D000065 ORTHO05D007307 2.7e-09 65.1 47 63.8
TPR.G37949 Trifolium pratense HOM05D000065 ORTHO05D007307 2.7e-09 65.1 47 63.8
FAN04G1616 Fragaria x ananassa HOM05D000065 ORTHO05D007307 3.5e-09 64.7 45 62.2
Gohir.D09G184700 Gossypium hirsutum HOM05D000065 ORTHO05D007307 3.5e-09 64.7 45 64.4
Gorai.006G207200 Gossypium raimondii HOM05D000065 ORTHO05D007307 3.5e-09 64.7 45 64.4
Lj2C165T12 Lonicera japonica HOM05D000065 ORTHO05D007307 3.5e-09 64.7 47 61.7
Sabra03G0101800 Salix brachista HOM05D000065 ORTHO05D007307 3.5e-09 64.7 47 57.4
Sc22g0004950 Simmondsia chinensis HOM05D000065 ORTHO05D007307 3.5e-09 64.7 47 57.4
AL6G45040 Arabidopsis lyrata HOM05D000065 ORTHO05D007307 4.6e-09 64.3 48 58.3
Carub.0006s2969 Capsella rubella HOM05D000065 ORTHO05D007307 4.6e-09 64.3 48 58.3
HanXRQChr13g0415421 Helianthus annuus HOM05D000065 ORTHO05D007307 4.6e-09 64.3 45 66.7
Lalb_Chr09g0320601 Lupinus albus HOM05D000065 ORTHO05D007307 4.6e-09 64.3 47 61.7
Manes.02G008800 Manihot esculenta HOM05D000065 ORTHO05D007307 4.6e-09 64.3 47 57.4
EL10Ac5g12931 Beta vulgaris HOM05D000065 ORTHO05D007307 6.0e-09 63.9 45 64.4
CAN.G1804.18 Capsicum annuum HOM05D000065 ORTHO05D007307 6.0e-09 63.9 47 63.8
Hund14212 Selenicereus undatus HOM05D000065 ORTHO05D007307 6.0e-09 63.9 45 57.8
DCAR_028400 Daucus carota HOM05D000065 ORTHO05D007307 7.8e-09 63.5 47 59.6
Psat2g185400 Pisum sativum HOM05D000065 ORTHO05D007307 7.8e-09 63.5 45 62.2
TWI81G0782 Tripterygium wilfordii HOM05D000065 ORTHO05D007307 7.8e-09 63.5 47 61.7
THA.LOC104806436 Tarenaya hassleriana HOM05D000065 ORTHO05D007307 1.0e-08 63.2 47 55.3
Ca_24495_v3 Cicer arietinum L. HOM05D001176 ORTHO05D008595 1.7e-08 62.4 47 61.7
ECA240G3897 Erigeron canadensis HOM05D000065 ORTHO05D007307 1.7e-08 62.4 45 64.4
Gohir.A09G190000 Gossypium hirsutum HOM05D000065 ORTHO05D007307 1.7e-08 62.4 45 62.2
Hma1.2p1_0359F.1_g135170 Hydrangea macrophylla HOM05D000065 ORTHO05D007307 1.7e-08 62.4 47 59.6
arahy.Tifrunner.gnm1.ann1.7TG80C Arachis hypogaea HOM05D000065 ORTHO05D007307 2.3e-08 62.0 47 61.7
arahy.Tifrunner.gnm1.ann1.GB8HVP Arachis hypogaea HOM05D000065 ORTHO05D007307 2.3e-08 62.0 47 61.7
CsaV3_4G006690 Cucumis sativus L. HOM05D000065 ORTHO05D007307 2.3e-08 62.0 41 73.2
Nitab4.5_0001210g0160 Nicotiana tabacum HOM05D000065 ORTHO05D007307 2.3e-08 62.0 47 57.4
Nitab4.5_0006775g0030 Nicotiana tabacum HOM05D000065 ORTHO05D007307 2.3e-08 62.0 47 57.4
Atru.chr9.1966 Acer truncatum HOM05D000065 ORTHO05D007307 3.0e-08 61.6 47 59.6
CANSAT21G1895 Cannabis sativa HOM05D000065 ORTHO05D007307 3.0e-08 61.6 47 59.6
Nitab4.5_0000798g0010 Nicotiana tabacum HOM05D000065 ORTHO05D007307 3.0e-08 61.6 47 55.3
Nitab4.5_0006775g0050 Nicotiana tabacum HOM05D000065 ORTHO05D007307 3.0e-08 61.6 47 57.4
SEGI_24571 Sequoiadendron giganteum HOM05D000065 ORTHO05D007307 3.0e-08 61.6 46 54.3
MD14G1130100 Malus domestica HOM05D000065 ORTHO05D007307 3.9e-08 61.2 45 60.0
vmacro13891 Vaccinium macrocarpon HOM05D000065 ORTHO05D007307 3.9e-08 61.2 47 61.7
ECA248G0924 Erigeron canadensis HOM05D000065 ORTHO05D007307 5.1e-08 60.8 45 62.2
Rhsim07G0081600 Rhododendron simsii HOM05D000065 ORTHO05D007307 5.1e-08 60.8 47 63.8
Nitab4.5_0001210g0170 Nicotiana tabacum HOM05D000065 ORTHO05D007307 6.6e-08 60.5 45 57.8
PGR031G2300 Punica granatum HOM05D000065 ORTHO05D007307 6.6e-08 60.5 44 59.1
Aqoxy5G04294 Aquilegia oxysepala HOM05D000065 ORTHO05D007307 8.7e-08 60.1 45 60.0
TAR375G0581 Trochodendron aralioides HOM05D000065 ORTHO05D007307 8.7e-08 60.1 45 60.0
ECA240G4646 Erigeron canadensis HOM05D002356 ORTHO05D007307 1.1e-07 59.7 44 63.6
Lsat_1_v5_gn_6_8360 Lactuca sativa HOM05D000065 ORTHO05D007307 1.1e-07 59.7 45 60.0
CsaV3_5G029330 Cucumis sativus L. HOM05D000065 ORTHO05D007307 1.9e-07 58.9 41 70.7
Lsat_1_v5_gn_6_83741 Lactuca sativa HOM05D000065 ORTHO05D007307 1.2e-06 56.2 45 60.0
CDE10G1152 Ceratophyllum demersum HOM05D000065 ORTHO05D007307 1.6e-06 55.8 46 52.2
PSO063G2420 Papaver somniferum HOM05D000065 ORTHO05D007307 8.1e-06 53.5 45 53.3


User provided reference genes

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