Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 1.3e-57 226.1 110 100.0
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 1.6e-31 139.4 99 73.7
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 8.1e-31 137.1 99 73.7
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 1.2e-26 123.2 99 67.7
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 2.1e-18 95.9 98 48.0
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 1.3e-17 93.2 98 45.9
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 1.7e-17 92.8 98 46.9
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 2.3e-17 92.4 97 47.4
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 5.1e-17 91.3 95 47.4
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 5.1e-17 91.3 98 46.9
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 6.6e-17 90.9 97 46.4
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 8.7e-17 90.5 97 44.3
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 3.3e-16 88.6 97 45.4
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 4.3e-16 88.2 98 44.9
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 7.3e-16 87.4 98 44.9
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 9.6e-16 87.0 97 43.3
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 2.8e-15 85.5 98 44.9
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 2.8e-15 85.5 98 45.9
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 2.8e-15 85.5 98 44.9
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 3.6e-15 85.1 98 42.9
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 3.6e-15 85.1 98 46.9
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 3.6e-15 85.1 96 45.8
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 3.6e-15 85.1 97 44.3
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 6.2e-15 84.3 56 69.6
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 8.1e-15 84.0 107 41.1
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 1.1e-14 83.6 98 46.9
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 1.1e-14 83.6 96 44.8
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 1.1e-14 83.6 98 45.9
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 1.4e-14 83.2 97 46.4
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 1.8e-14 82.8 97 46.4
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 2.4e-14 82.4 98 46.9
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 2.4e-14 82.4 97 44.3
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 4.0e-14 81.6 98 40.8
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 5.2e-14 81.3 96 43.8
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 5.2e-14 81.3 97 43.3
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 6.9e-14 80.9 97 40.2
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 9.0e-14 80.5 98 41.8
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 1.2e-13 80.1 97 41.2
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 1.5e-13 79.7 97 42.3
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 2.0e-13 79.3 98 43.9
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 2.6e-13 79.0 97 43.3
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 3.4e-13 78.6 98 40.8
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 3.4e-13 78.6 98 48.0
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 3.4e-13 78.6 98 44.9
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 3.4e-13 78.6 98 41.8
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 3.4e-13 78.6 96 39.6
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 4.4e-13 78.2 96 40.6
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 5.8e-13 77.8 96 39.6
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 7.6e-13 77.4 98 43.9
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 7.6e-13 77.4 96 40.6
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 7.6e-13 77.4 97 40.2
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 7.6e-13 77.4 96 42.7
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 9.9e-13 77.0 69 50.7
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 9.9e-13 77.0 62 54.8
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 1.3e-12 76.6 51 68.6
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 1.3e-12 76.6 97 38.1
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 1.7e-12 76.3 96 43.8
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 1.7e-12 76.3 96 43.8
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 1.7e-12 76.3 96 43.8
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 1.7e-12 76.3 98 41.8
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 6.4e-12 74.3 56 60.7
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 6.4e-12 74.3 98 41.8
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 6.4e-12 74.3 96 41.7
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 8.4e-12 73.9 96 41.7
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 1.1e-11 73.6 96 41.7
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 1.1e-11 73.6 96 37.5
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 1.1e-11 73.6 97 41.2
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 1.4e-11 73.2 96 37.5
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 1.4e-11 73.2 96 38.5
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 1.4e-11 73.2 99 39.4
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 1.4e-11 73.2 96 43.8
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 1.9e-11 72.8 96 37.5
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 1.9e-11 72.8 98 42.9
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 1.9e-11 72.8 97 38.1
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 1.9e-11 72.8 98 37.8
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 2.4e-11 72.4 97 38.1
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 3.2e-11 72.0 97 37.1
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 3.2e-11 72.0 60 53.3
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 7.1e-11 70.9 95 43.2
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 1.2e-10 70.1 54 59.3
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 1.6e-10 69.7 96 42.7
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 1.6e-10 69.7 98 38.8
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 2.7e-10 68.9 96 41.7
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 3.5e-10 68.6 96 38.5
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 4.6e-10 68.2 96 42.7
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 6.0e-10 67.8 56 57.1
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 6.0e-10 67.8 62 51.6
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 2.3e-09 65.9 97 38.1
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 2.3e-09 65.9 98 38.8
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 6.6e-09 64.3 61 50.8
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 1.1e-08 63.5 96 38.5
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 1.1e-08 63.5 96 38.5
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 1.1e-08 63.5 96 38.5
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 9.6e-08 60.5 48 56.2
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 9.6e-08 60.5 53 52.8
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.3e-07 60.1 43 60.5
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 6.2e-07 57.8 80 38.8
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 8.1e-07 57.4 44 54.5
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 2.4e-06 55.8 42 54.8
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 9.0e-06 53.9 50 52.0


User provided reference genes

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