Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C032291.2 Cucumis melo HOM05D005133 ORTHO05D167678 5.5e-107 391.0 196 100.0
MELO3C033838.2 Cucumis melo HOM05D005133 ORTHO05D166559 2.0e-32 143.3 130 62.3
MELO3C031967.2 Cucumis melo HOM05D005133 ORTHO05D165940 1.1e-25 120.9 132 58.3
MELO3C027575.2 Cucumis melo HOM05D019030 ORTHO05D006685 1.9e-19 100.1 76 73.7
MELO3C033909.2 Cucumis melo HOM05D005133 ORTHO05D020525 4.8e-18 95.5 89 61.8
MELO3C030860.2 Cucumis melo HOM05D005133 ORTHO05D006685 2.6e-16 89.7 87 63.2
MELO3C030134.2 Cucumis melo HOM05D005133 ORTHO05D006685 3.4e-16 89.4 127 50.4
MELO3C032175.2 Cucumis melo HOM05D019030 ORTHO05D017703 6.3e-10 68.6 53 69.8
MELO3C006074.2 Cucumis melo HOM05D005133 ORTHO05D006685 1.7e-07 60.5 51 68.6
COL.COLO4_06373 Corchorus olitorius HOM05D005133 ORTHO05D006685 2.2e-07 60.1 45 75.6
Lj7C506T5 Lonicera japonica HOM05D005133 ORTHO05D006685 5.0e-07 58.9 54 61.1
Cpa.g.sc11.53 Carica papaya HOM05D005133 ORTHO05D006685 6.5e-07 58.5 55 60.0
Gohir.A07G140500 Gossypium hirsutum HOM05D005133 ORTHO05D006685 6.5e-07 58.5 45 73.3
Gohir.D07G145800 Gossypium hirsutum HOM05D005133 ORTHO05D006685 6.5e-07 58.5 45 73.3
Gorai.001G158000 Gossypium raimondii HOM05D005133 ORTHO05D006685 6.5e-07 58.5 45 73.3
LjContig00310g0005517 Lotus japonicus HOM05D005133 ORTHO05D006685 6.5e-07 58.5 128 36.7
Thecc.01G351000 Theobroma cacao HOM05D005133 ORTHO05D006685 6.5e-07 58.5 45 73.3
CSS0000155 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 1.1e-06 57.8 45 71.1
CSS0009332 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 1.1e-06 57.8 45 71.1
GSVIVG01027010001 Vitis vinifera HOM05D005133 ORTHO05D006685 1.1e-06 57.8 45 71.1
Dinv43872 Davidia involucrata HOM05D005133 ORTHO05D006685 1.4e-06 57.4 53 60.4
Ca_20805_v3 Cicer arietinum L. HOM05D005133 ORTHO05D006685 1.9e-06 57.0 45 71.1
Duzib133G0222 Durio zibethinus HOM05D005133 ORTHO05D006685 1.9e-06 57.0 45 71.1
Glyma.12G050200 Glycine max HOM05D005133 ORTHO05D006685 1.9e-06 57.0 54 61.1
ClCG05G014200 Citrullus lanatus HOM05D005133 ORTHO05D006685 2.5e-06 56.6 44 72.7
CsaV3_3G008530 Cucumis sativus L. HOM05D005133 ORTHO05D006685 2.5e-06 56.6 44 72.7
Dinv32531 Davidia involucrata HOM05D005133 ORTHO05D006685 2.5e-06 56.6 45 68.9
Ciclev10020434m.g Citrus clementina HOM05D005133 ORTHO05D006685 3.2e-06 56.2 45 68.9
Migut.H02011 Erythranthe guttata HOM05D005133 ORTHO05D006685 3.2e-06 56.2 94 39.4
Peaxi162Scf00020g01713 Petunia axillaris HOM05D005133 ORTHO05D006685 3.2e-06 56.2 45 71.1
arahy.Tifrunner.gnm1.ann1.JRPH7J Arachis hypogaea HOM05D005133 ORTHO05D006685 4.2e-06 55.8 55 60.0
MSTRG.20869 Avicennia marina HOM05D005133 ORTHO05D006685 4.2e-06 55.8 45 68.9
Medtr4g068010 Medicago truncatula HOM05D005133 ORTHO05D006685 4.2e-06 55.8 54 59.3
QL07p038619 Quercus lobata HOM05D005133 ORTHO05D006685 4.2e-06 55.8 55 56.4
TPR.G34211 Trifolium pratense HOM05D005133 ORTHO05D006685 4.2e-06 55.8 54 59.3
Cfa007878 Carpinus fangiana HOM05D005133 ORTHO05D006685 5.5e-06 55.5 45 66.7
Cc06_g17440 Coffea canephora HOM05D005133 ORTHO05D006685 5.5e-06 55.5 69 52.2
Sed0023612 Sechium edule HOM05D005133 ORTHO05D006685 7.2e-06 55.1 44 70.5
arahy.Tifrunner.gnm1.ann1.ZNWN3Y Arachis hypogaea HOM05D005133 ORTHO05D006685 9.4e-06 54.7 55 58.2
Nitab4.5_0000915g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 9.4e-06 54.7 45 68.9


User provided reference genes

Program Settings