Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C032197.2 Cucumis melo HOM05D001593 ORTHO05D010032 3.7e-28 127.5 64 100.0
CsaV3_3G006040 Cucumis sativus L. HOM05D001593 ORTHO05D010032 2.0e-26 121.7 60 100.0
ClCG10G006650 Citrullus lanatus HOM05D001593 ORTHO05D010032 5.6e-24 113.6 60 91.7
Sed0008194 Sechium edule HOM05D001593 ORTHO05D010032 8.0e-23 109.8 60 83.3
ClCG10G006610 Citrullus lanatus HOM05D001593 ORTHO05D010032 3.0e-22 107.8 58 87.9
MELO3C016546.2 Cucumis melo HOM05D001593 ORTHO05D010032 1.5e-21 105.5 58 84.5
CsaV3_3G006030 Cucumis sativus L. HOM05D001593 ORTHO05D010032 1.5e-21 105.5 58 86.2
Actinidia05168 Actinidia chinensis HOM05D001593 ORTHO05D010032 3.6e-15 84.3 62 58.1
CSS0027856 Camellia sinensis var. sinensis HOM05D001593 ORTHO05D010032 3.6e-15 84.3 59 61.0
Manes.03G115300 Manihot esculenta HOM05D001593 ORTHO05D010032 1.2e-13 79.3 59 57.6
QL08p018774 Quercus lobata HOM05D001593 ORTHO05D010032 2.6e-13 78.2 57 57.9
Prupe.4G188300 Prunus persica HOM05D001593 ORTHO05D010032 3.4e-13 77.8 59 59.3
CiPaw.12G122400 Carya illinoinensis HOM05D001593 ORTHO05D010032 9.8e-13 76.3 56 57.1
RcHm_v2.0_Chr5g0035101 Rosa chinensis HOM05D001593 ORTHO05D010032 9.8e-13 76.3 60 56.7
FvH4_3g20810 Fragaria vesca HOM05D001593 ORTHO05D010032 1.3e-12 75.9 60 55.0
FAN16G0784 Fragaria x ananassa HOM05D001593 ORTHO05D010032 1.3e-12 75.9 60 56.7
FAN21G2072 Fragaria x ananassa HOM05D001593 ORTHO05D010032 1.3e-12 75.9 60 56.7
Potri.011G127800 Populus trichocarpa HOM05D001593 ORTHO05D010032 4.9e-12 73.9 59 50.8
DCAR_009980 Daucus carota HOM05D001593 ORTHO05D010032 8.3e-12 73.2 58 55.2
Prupe.4G188200 Prunus persica HOM05D001593 ORTHO05D010032 8.3e-12 73.2 58 58.6
FAN25G3755 Fragaria x ananassa HOM05D001593 ORTHO05D010032 1.1e-11 72.8 60 55.0
Cc01_g01380 Coffea canephora HOM05D001593 ORTHO05D010032 2.4e-11 71.6 59 54.2
FAN16G2191 Fragaria x ananassa HOM05D001593 ORTHO05D010032 7.0e-11 70.1 60 58.3
ECA246G2813 Erigeron canadensis HOM05D001593 ORTHO05D010032 9.2e-11 69.7 58 55.2
Eucgr.F03348 Eucalyptus grandis HOM05D001593 ORTHO05D010032 9.2e-11 69.7 58 55.2
Lalb_Chr03g0030461 Lupinus albus HOM05D001593 ORTHO05D010032 9.2e-11 69.7 57 45.6
Eucgr.F03349 Eucalyptus grandis HOM05D001593 ORTHO05D010032 1.2e-10 69.3 58 56.9
FvH4_3g20820 Fragaria vesca HOM05D001593 ORTHO05D010032 1.2e-10 69.3 60 56.7
Prupe.4G188400 Prunus persica HOM05D001593 ORTHO05D010032 1.2e-10 69.3 59 55.9
PGR031G2663 Punica granatum HOM05D001593 ORTHO05D010032 1.6e-10 68.9 59 57.6
TPR.G7332 Trifolium pratense HOM05D001593 ORTHO05D010032 2.0e-10 68.6 56 55.4
Potri.001G405600 Populus trichocarpa HOM05D001593 ORTHO05D010032 2.7e-10 68.2 59 49.2
Sabra16G0267000 Salix brachista HOM05D001593 ORTHO05D010032 2.7e-10 68.2 59 47.5
Sabra16G0268900 Salix brachista HOM05D001593 ORTHO05D010032 2.7e-10 68.2 59 47.5
arahy.Tifrunner.gnm1.ann1.SVGI7B Arachis hypogaea HOM05D001593 ORTHO05D010032 1.0e-09 66.2 57 50.9
Lsat_1_v5_gn_5_7041 Lactuca sativa HOM05D001593 ORTHO05D010032 2.3e-09 65.1 55 52.7
SalBow7G3151 Salvia bowleyana HOM05D001593 ORTHO05D010032 2.3e-09 65.1 59 52.5
TPR.G23028 Trifolium pratense HOM05D001593 ORTHO05D010032 3.9e-09 64.3 57 49.1
TWI38G2157 Tripterygium wilfordii HOM05D001593 ORTHO05D010032 3.9e-09 64.3 59 49.2
Psat4g174160 Pisum sativum HOM05D001593 ORTHO05D010032 5.0e-09 63.9 57 42.1
arahy.Tifrunner.gnm1.ann1.I7A6WZ Arachis hypogaea HOM05D001593 ORTHO05D010032 6.6e-09 63.5 57 47.4
Lsat_1_v5_gn_5_7021 Lactuca sativa HOM05D001593 ORTHO05D010032 8.6e-09 63.2 55 50.9
Sed0013638 Sechium edule HOM05D001593 ORTHO05D010032 8.6e-09 63.2 37 81.1
MD03G1220500 Malus domestica HOM05D001593 ORTHO05D010032 1.9e-08 62.0 63 46.0
Lalb_Chr17g0345681 Lupinus albus HOM05D001593 ORTHO05D010032 2.5e-08 61.6 56 46.4
Aqoxy4G01373 Aquilegia oxysepala HOM05D001593 ORTHO05D010032 3.3e-08 61.2 64 42.2
Lj3g0022181 Lotus japonicus HOM05D001593 ORTHO05D010032 3.3e-08 61.2 57 43.9
Lj3g0024706 Lotus japonicus HOM05D001593 ORTHO05D010032 3.3e-08 61.2 57 43.9
Medtr3g055130 Medicago truncatula HOM05D001593 ORTHO05D010032 3.3e-08 61.2 55 49.1
Medtr3g055120 Medicago truncatula HOM05D001593 ORTHO05D010032 5.6e-08 60.5 57 40.4
ECA246G1386 Erigeron canadensis HOM05D001593 ORTHO05D010032 7.3e-08 60.1 55 45.5
HanXRQChr05g0156501 Helianthus annuus HOM05D001593 ORTHO05D010032 1.6e-07 58.9 55 47.3
Glyma.06G249800 Glycine max HOM05D001593 ORTHO05D010032 3.6e-07 57.8 57 40.4
VMungo1309G1650 Vigna mungo HOM05D001593 ORTHO05D010032 3.6e-07 57.8 57 47.4
Phvul.011G154100 Phaseolus vulgaris HOM05D001593 ORTHO05D010032 4.7e-07 57.4 56 44.6
VMungo1127G1295 Vigna mungo HOM05D001593 ORTHO05D010032 8.1e-07 56.6 57 38.6
Lalb_Chr03g0030521 Lupinus albus HOM05D001593 ORTHO05D010032 5.2e-06 53.9 55 45.5
Phvul.011G153600 Phaseolus vulgaris HOM05D001593 ORTHO05D010032 5.2e-06 53.9 57 36.8


User provided reference genes

Program Settings