Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C032101.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.5e-147 525.4 262 100.0
ClCG07G007690 Citrullus lanatus HOM05D000107 ORTHO05D000062 2.5e-30 136.7 274 36.9
MELO3C029726.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.3e-30 135.2 196 44.4
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.4e-20 104.4 251 34.3
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.9e-18 96.7 57 78.9
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.9e-17 94.0 57 80.7
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 1.0e-15 88.2 73 54.8
Rhsim03G0123400 Rhododendron simsii HOM05D007314 ORTHO05D010380 5.6e-14 82.4 73 52.1
Sed0001060 Sechium edule HOM05D007314 ORTHO05D003768 3.1e-12 76.6 67 55.2
Sed0016549 Sechium edule HOM05D007314 ORTHO05D003768 5.3e-12 75.9 51 70.6
Rhsim01G0043800 Rhododendron simsii HOM05D007314 ORTHO05D003768 6.9e-12 75.5 68 52.9
Rhsim01G0136300 Rhododendron simsii HOM05D004909 ORTHO05D009316 6.9e-12 75.5 69 52.2
Rhsim04G0083300 Rhododendron simsii HOM05D007314 ORTHO05D010380 2.0e-11 73.9 76 48.7
Rhsim06G0121300 Rhododendron simsii HOM05D007314 ORTHO05D010380 2.6e-11 73.6 76 47.4
CANSAT25G0318 Cannabis sativa HOM05D007314 ORTHO05D010380 9.9e-11 71.6 147 34.0
ClCG11G015990 Citrullus lanatus HOM05D007314 ORTHO05D003768 4.9e-10 69.3 73 49.3
Rhsim04G0152600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-09 68.2 90 38.9
RcHm_v2.0_Chr5g0064791 Rosa chinensis HOM05D007314 ORTHO05D023934 1.4e-09 67.8 64 51.6
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 3.2e-09 66.6 63 49.2
FvH4_4g12371 Fragaria vesca HOM05D007314 ORTHO05D003768 4.2e-09 66.2 63 49.2
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 4.2e-09 66.2 63 50.8
Sed0028051 Sechium edule HOM05D007314 ORTHO05D010380 2.1e-08 63.9 56 57.1
BolC4t24885H Brassica oleracea HOM05D031530 ORTHO05D023934 3.5e-08 63.2 69 43.5
MELO3C027838.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.7e-07 60.8 30 90.0
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.0e-07 60.1 57 49.1
ClCG08G004820 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.1e-06 58.2 52 48.1
ClCG10G008410 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.1e-06 58.2 38 71.1
Sed0001469 Sechium edule HOM05D007314 ORTHO05D003768 2.5e-06 57.0 57 50.9
Sed0011465 Sechium edule HOM05D007314 ORTHO05D003768 2.5e-06 57.0 57 50.9
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 3.3e-06 56.6 35 74.3
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 9.6e-06 55.1 48 50.0


User provided reference genes

Program Settings