Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C032071.2 Cucumis melo HOM05D000181 ORTHO05D169103 9.8e-86 320.1 161 100.0
Dinv37517 Davidia involucrata HOM05D000181 ORTHO05D007406 6.3e-08 61.6 99 38.4
Duzib084G0413 Durio zibethinus HOM05D000181 ORTHO05D007406 3.1e-07 59.3 110 39.1
ClCG07G011510 Citrullus lanatus HOM05D000181 ORTHO05D007406 4.1e-07 58.9 110 37.3
Atru.chr9.1924 Acer truncatum HOM05D000181 ORTHO05D007406 5.3e-07 58.5 127 35.4
MELO3C001406.2 Cucumis melo HOM05D000181 ORTHO05D007406 5.3e-07 58.5 31 83.9
Gohir.D08G125266 Gossypium hirsutum HOM05D000181 ORTHO05D007406 5.3e-07 58.5 31 77.4
Gorai.004G132200 Gossypium raimondii HOM05D000181 ORTHO05D007406 5.3e-07 58.5 99 37.4
Hund14209 Selenicereus undatus HOM05D000181 ORTHO05D007406 5.3e-07 58.5 113 37.2
Cfa011985 Carpinus fangiana HOM05D000181 ORTHO05D007406 7.0e-07 58.2 99 38.4
Ciclev10018718m.g Citrus clementina HOM05D000181 ORTHO05D007406 7.0e-07 58.2 99 38.4
Eucgr.D01758 Eucalyptus grandis HOM05D000181 ORTHO05D007406 7.0e-07 58.2 110 37.3
PGR031G3953 Punica granatum HOM05D000181 ORTHO05D007406 7.0e-07 58.2 99 38.4
Actinidia27312 Actinidia chinensis HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
CAN.G567.9 Capsicum annuum HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
CDE04G1864 Ceratophyllum demersum HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
Ca_17471_v3 Cicer arietinum L. HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
Cc08_g16240 Coffea canephora HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
Gohir.A08G112300 Gossypium hirsutum HOM05D000181 ORTHO05D007406 9.1e-07 57.8 99 37.4
Hma1.2p1_0440F.1_g153440 Hydrangea macrophylla HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
MBI07_g46373_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
MBI07_g46802_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
Nn1g00249 Nelumbo nucifera HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
Nitab4.5_0000798g0070 Nicotiana tabacum HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
Nitab4.5_0005962g0040 Nicotiana tabacum HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
Oeu038548.1 Olea europaea HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
Peaxi162Scf00074g00741 Petunia axillaris HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
Psat0s1312g0080 Pisum sativum HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
Prupe.5G122500 Prunus persica HOM05D000181 ORTHO05D007406 9.1e-07 57.8 99 37.4
SalBow1G5541 Salvia bowleyana HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
Sed0021063 Sechium edule HOM05D000181 ORTHO05D007406 9.1e-07 57.8 110 37.3
Solyc08g082530.4 Solanum lycopersicum HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
Sopen08g030790 Solanum pennellii HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
PGSC0003DMG400012269 Solanum tuberosum HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
TAR629G1994 Trochodendron aralioides HOM05D000181 ORTHO05D007406 9.1e-07 57.8 31 77.4
unitig_37.g12128 Utricularia gibba HOM05D000074 ORTHO05D007406 9.1e-07 57.8 31 77.4
CiPaw.11G119200 Carya illinoinensis HOM05D000181 ORTHO05D007406 1.2e-06 57.4 99 37.4
Haze_09087 Corylus avellana HOM05D000181 ORTHO05D007406 1.2e-06 57.4 110 37.3
Manes.02G008600 Manihot esculenta HOM05D000181 ORTHO05D007406 1.2e-06 57.4 99 37.4
QL02p030075 Quercus lobata HOM05D000181 ORTHO05D007406 1.2e-06 57.4 99 38.4
Thecc.03G300400 Theobroma cacao HOM05D000181 ORTHO05D007406 1.2e-06 57.4 110 37.3
Dinv38822 Davidia involucrata HOM05D006022 ORTHO05D007406 1.6e-06 57.0 31 77.4
FvH4_5g04870 Fragaria vesca HOM05D000181 ORTHO05D007406 1.6e-06 57.0 99 36.4
FAN04G1057 Fragaria x ananassa HOM05D002356 ORTHO05D007406 1.6e-06 57.0 99 36.4
FAN08G0678 Fragaria x ananassa HOM05D002356 ORTHO05D007406 1.6e-06 57.0 99 36.4
FAN13G1079 Fragaria x ananassa HOM05D002356 ORTHO05D007406 1.6e-06 57.0 99 36.4
FAN18G2206 Fragaria x ananassa HOM05D002356 ORTHO05D007406 1.6e-06 57.0 99 36.4
FAN18G2731 Fragaria x ananassa HOM05D000181 ORTHO05D007406 1.6e-06 57.0 99 36.4
RcHm_v2.0_Chr7g0194221 Rosa chinensis HOM05D000181 ORTHO05D007406 1.6e-06 57.0 110 36.4
Ah.12g052670 Amaranthus hybridus HOM05D000181 ORTHO05D007406 2.0e-06 56.6 82 42.7
Aqoxy5G04277 Aquilegia oxysepala HOM05D000181 ORTHO05D007406 2.0e-06 56.6 31 74.2
ECA240G1581 Erigeron canadensis HOM05D000181 ORTHO05D007406 2.0e-06 56.6 31 74.2
Migut.A00625 Erythranthe guttata HOM05D000181 ORTHO05D007406 2.0e-06 56.6 31 74.2
HanXRQChr13g0415441 Helianthus annuus HOM05D000181 ORTHO05D007406 2.0e-06 56.6 31 74.2
Lsat_1_v5_gn_6_83680 Lactuca sativa HOM05D000181 ORTHO05D007406 2.0e-06 56.6 31 74.2
Medtr8g099605 Medicago truncatula HOM05D000181 ORTHO05D007406 2.0e-06 56.6 31 74.2
Sc22g0004900 Simmondsia chinensis HOM05D000181 ORTHO05D007406 2.0e-06 56.6 31 74.2
arahy.Tifrunner.gnm1.ann1.27DD66 Arachis hypogaea HOM05D000181 ORTHO05D007406 2.6e-06 56.2 99 36.4
arahy.Tifrunner.gnm1.ann1.K2TKXN Arachis hypogaea HOM05D000181 ORTHO05D007406 2.6e-06 56.2 99 36.4
AUR62010860 Chenopodium quinoa HOM05D000181 ORTHO05D007406 2.6e-06 56.2 99 37.4
AUR62019859 Chenopodium quinoa HOM05D000181 ORTHO05D007406 2.6e-06 56.2 99 37.4
Glyma.08G023900 Glycine max HOM05D000181 ORTHO05D007406 2.6e-06 56.2 99 36.4
MD06G1109500 Malus domestica HOM05D000181 ORTHO05D007406 2.6e-06 56.2 99 35.4
MD14G1130500 Malus domestica HOM05D000181 ORTHO05D007406 2.6e-06 56.2 99 35.4
Peaxi162Scf00074g00638 Petunia axillaris HOM05D000181 ORTHO05D007406 2.6e-06 56.2 34 67.6
Phvul.002G299700 Phaseolus vulgaris HOM05D000181 ORTHO05D007406 2.6e-06 56.2 99 36.4
VMungo0251G1494 Vigna mungo HOM05D000181 ORTHO05D007406 2.6e-06 56.2 99 36.4
Aa31LG6G7180 Aethionema arabicum HOM05D000181 ORTHO05D007406 3.5e-06 55.8 31 74.2
AL7G29370 Arabidopsis lyrata HOM05D000181 ORTHO05D007406 3.5e-06 55.8 31 74.2
AT4G23940 Arabidopsis thaliana HOM05D000181 ORTHO05D007406 3.5e-06 55.8 31 74.2
BcaC09g50928 Brassica carinata HOM05D000181 ORTHO05D007406 3.5e-06 55.8 31 74.2
BcaNung01101 Brassica carinata HOM05D000181 ORTHO05D007406 3.5e-06 55.8 31 74.2
A01p15250 Brassica napus HOM05D002356 ORTHO05D007406 3.5e-06 55.8 31 74.2
C01p19180 Brassica napus HOM05D002356 ORTHO05D007406 3.5e-06 55.8 31 74.2
BolC1t01844H Brassica oleracea HOM05D002356 ORTHO05D007406 3.5e-06 55.8 31 74.2
BraA01t01465Z Brassica rapa HOM05D002356 ORTHO05D007406 3.5e-06 55.8 31 74.2
CANSAT21G0203 Cannabis sativa HOM05D000181 ORTHO05D007406 3.5e-06 55.8 109 36.7
Carub.0007s1714 Capsella rubella HOM05D000181 ORTHO05D007406 3.5e-06 55.8 31 74.2
CARHR231350 Cardamine hirsuta HOM05D000181 ORTHO05D007406 3.5e-06 55.8 31 74.2
Thhalv10024337m.g Eutrema salsugineum HOM05D000181 ORTHO05D007406 3.5e-06 55.8 31 74.2
Lj4g0006821 Lotus japonicus HOM05D000181 ORTHO05D007406 3.5e-06 55.8 99 36.4
Sp7g21910 Schrenkiella parvula HOM05D000181 ORTHO05D007406 3.5e-06 55.8 31 74.2
TWI60G1246 Tripterygium wilfordii HOM05D000181 ORTHO05D007406 3.5e-06 55.8 99 36.4
MSTRG.25690 Avicennia marina HOM05D000181 ORTHO05D007406 4.5e-06 55.5 31 74.2
COL.COLO4_10722 Corchorus olitorius HOM05D000181 ORTHO05D007406 4.5e-06 55.5 99 36.4
MELO3C016278.2 Cucumis melo HOM05D000181 ORTHO05D007406 5.9e-06 55.1 110 35.5
Oeu009976.1 Olea europaea HOM05D000181 ORTHO05D007406 5.9e-06 55.1 31 74.2
Potri.001G089800 Populus trichocarpa HOM05D000181 ORTHO05D007406 5.9e-06 55.1 99 37.4
EL10Ac5g12935 Beta vulgaris HOM05D000181 ORTHO05D007406 7.7e-06 54.7 99 37.4
DCAR_029910 Daucus carota HOM05D000181 ORTHO05D007406 7.7e-06 54.7 31 74.2
Sabra01G0066200 Salix brachista HOM05D000181 ORTHO05D007406 7.7e-06 54.7 31 74.2
TPR.G3384 Trifolium pratense HOM05D000181 ORTHO05D007406 7.7e-06 54.7 96 37.5
GSVIVG01019239001 Vitis vinifera HOM05D000181 ORTHO05D007406 7.7e-06 54.7 110 35.5


User provided reference genes

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