Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C032066.2 Cucumis melo HOM05D005146 ORTHO05D006752 5.9e-109 397.5 197 100.0
MELO3C011001.2 Cucumis melo HOM05D005146 ORTHO05D006752 4.8e-26 122.1 73 84.9
CsaV3_2G029420 Cucumis sativus L. HOM05D005146 ORTHO05D006752 4.8e-26 122.1 73 84.9
Sed0001191 Sechium edule HOM05D005146 ORTHO05D006752 2.2e-23 113.2 73 76.7
MELO3C029148.2 Cucumis melo HOM05D005146 ORTHO05D006752 1.4e-22 110.5 121 57.9
Manes.11G065850 Manihot esculenta HOM05D005146 ORTHO05D006752 9.4e-22 107.8 73 75.3
Manes.05G148600 Manihot esculenta HOM05D005146 ORTHO05D006752 2.1e-21 106.7 73 74.0
PGR083G0855 Punica granatum HOM05D005146 ORTHO05D006752 4.7e-21 105.5 73 72.6
Sabra02G0019300 Salix brachista HOM05D005146 ORTHO05D006752 4.7e-21 105.5 73 72.6
CiPaw.07G151400 Carya illinoinensis HOM05D005146 ORTHO05D006752 6.1e-21 105.1 73 72.6
Potri.002G023700 Populus trichocarpa HOM05D005146 ORTHO05D006752 6.1e-21 105.1 73 71.2
Cfa006669 Carpinus fangiana HOM05D005146 ORTHO05D006752 7.9e-21 104.8 73 71.2
QL02p011373 Quercus lobata HOM05D005146 ORTHO05D006752 7.9e-21 104.8 73 72.6
Gohir.A08G010500 Gossypium hirsutum HOM05D005146 ORTHO05D006752 1.8e-20 103.6 73 71.2
PSO170G4907 Papaver somniferum HOM05D005146 ORTHO05D006752 2.3e-20 103.2 73 69.9
PSO700G0287 Papaver somniferum HOM05D005146 ORTHO05D006752 2.3e-20 103.2 73 69.9
Ciclev10002090m.g Citrus clementina HOM05D005146 ORTHO05D006752 3.9e-20 102.4 73 68.5
Eucgr.F01641 Eucalyptus grandis HOM05D005146 ORTHO05D006752 5.1e-20 102.1 73 68.5
Thecc.09G245400 Theobroma cacao HOM05D005146 ORTHO05D006752 6.7e-20 101.7 73 71.2
CSS0007392 Camellia sinensis var. sinensis HOM05D005146 ORTHO05D006752 8.8e-20 101.3 73 67.1
CSS0032974 Camellia sinensis var. sinensis HOM05D005146 ORTHO05D006752 8.8e-20 101.3 73 67.1
CAN.G311.14 Capsicum annuum HOM05D005146 ORTHO05D006752 8.8e-20 101.3 73 67.1
Gohir.D08G020900 Gossypium hirsutum HOM05D005146 ORTHO05D006752 8.8e-20 101.3 73 69.9
AUR62019460 Chenopodium quinoa HOM05D005146 ORTHO05D006752 1.1e-19 100.9 73 67.1
Haze_04102 Corylus avellana HOM05D005146 ORTHO05D006752 1.1e-19 100.9 73 68.5
Lalb_Chr23g0266181 Lupinus albus HOM05D005146 ORTHO05D006752 1.5e-19 100.5 73 69.9
Atru.chr13.312 Acer truncatum HOM05D005146 ORTHO05D006752 2.0e-19 100.1 73 67.1
CANSAT11G0704 Cannabis sativa HOM05D005146 ORTHO05D006752 2.0e-19 100.1 73 65.8
COL.COLO4_37538 Corchorus olitorius HOM05D005146 ORTHO05D006752 2.0e-19 100.1 73 65.8
arahy.Tifrunner.gnm1.ann1.NX94TN Arachis hypogaea HOM05D005146 ORTHO05D006752 2.6e-19 99.8 90 58.9
arahy.Tifrunner.gnm1.ann1.RM6BI2 Arachis hypogaea HOM05D005146 ORTHO05D006752 2.6e-19 99.8 90 58.9
Aqoxy6G00492 Aquilegia oxysepala HOM05D005146 ORTHO05D006752 3.3e-19 99.4 73 67.1
Hund05199 Selenicereus undatus HOM05D005146 ORTHO05D006752 3.3e-19 99.4 73 67.1
PGSC0003DMG400003775 Solanum tuberosum HOM05D005146 ORTHO05D006752 3.3e-19 99.4 73 65.8
TPR.G34539 Trifolium pratense HOM05D005146 ORTHO05D006752 3.3e-19 99.4 73 68.5
arahy.Tifrunner.gnm1.ann1.DQ6KFY Arachis hypogaea HOM05D005146 ORTHO05D006752 4.4e-19 99.0 90 57.8
arahy.Tifrunner.gnm1.ann1.VN499F Arachis hypogaea HOM05D005146 ORTHO05D006752 4.4e-19 99.0 90 57.8
Migut.N03153 Erythranthe guttata HOM05D005146 ORTHO05D006752 4.4e-19 99.0 73 67.1
Solyc04g081310.3 Solanum lycopersicum HOM05D005146 ORTHO05D006752 4.4e-19 99.0 73 65.8
Sopen04g034930 Solanum pennellii HOM05D005146 ORTHO05D006752 4.4e-19 99.0 73 65.8
TWI56G0936 Tripterygium wilfordii HOM05D005146 ORTHO05D006752 4.4e-19 99.0 73 64.4
Dinv31832 Davidia involucrata HOM05D005146 ORTHO05D006752 5.7e-19 98.6 73 65.8
Glyma.20G014100 Glycine max HOM05D005146 ORTHO05D006752 5.7e-19 98.6 73 68.5
EL10Ac6g13895 Beta vulgaris HOM05D005146 ORTHO05D006752 7.4e-19 98.2 73 65.8
Cpa.g.sc1059.3 Carica papaya HOM05D005146 ORTHO05D006752 7.4e-19 98.2 73 67.1
Oeu020876.1 Olea europaea HOM05D005146 ORTHO05D006752 7.4e-19 98.2 73 68.5
Medtr3g113750 Medicago truncatula HOM05D005146 ORTHO05D006752 9.7e-19 97.8 73 67.1
MD15G1013600 Malus domestica HOM05D005146 ORTHO05D006752 1.3e-18 97.4 73 63.0
Nn6g32362 Nelumbo nucifera HOM05D005146 ORTHO05D006752 1.3e-18 97.4 73 67.1
ECA238G2776 Erigeron canadensis HOM05D005146 ORTHO05D006752 1.7e-18 97.1 73 63.0
Nitab4.5_0001540g0020 Nicotiana tabacum HOM05D005146 ORTHO05D006752 1.7e-18 97.1 73 65.8
Prupe.1G367100 Prunus persica HOM05D005146 ORTHO05D006752 1.7e-18 97.1 73 64.4
GSVIVG01009887001 Vitis vinifera HOM05D005146 ORTHO05D006752 1.7e-18 97.1 73 67.1
Actinidia15413 Actinidia chinensis HOM05D005146 ORTHO05D006752 2.2e-18 96.7 73 65.8
RcHm_v2.0_Chr6g0302671 Rosa chinensis HOM05D005146 ORTHO05D006752 2.2e-18 96.7 73 65.8
ClCG08G014400 Citrullus lanatus HOM05D005146 ORTHO05D006752 2.8e-18 96.3 62 79.0
Cc10_g01800 Coffea canephora HOM05D005146 ORTHO05D006752 2.8e-18 96.3 73 65.8
DCAR_009928 Daucus carota HOM05D005146 ORTHO05D006752 2.8e-18 96.3 73 61.6
Glyma.07G217500 Glycine max HOM05D005146 ORTHO05D006752 2.8e-18 96.3 73 67.1
Ca_14210_v3 Cicer arietinum L. HOM05D005146 ORTHO05D006752 3.7e-18 95.9 73 67.1
Lsat_1_v5_gn_2_8601 Lactuca sativa HOM05D005146 ORTHO05D006752 3.7e-18 95.9 73 63.0
Rhsim06G0022400 Rhododendron simsii HOM05D005146 ORTHO05D006752 3.7e-18 95.9 73 64.4
THA.LOC104825772 Tarenaya hassleriana HOM05D005146 ORTHO05D006752 3.7e-18 95.9 73 65.8
MD08G1014100 Malus domestica HOM05D005146 ORTHO05D006752 4.8e-18 95.5 73 61.6
Psat5g013440 Pisum sativum HOM05D005146 ORTHO05D006752 6.3e-18 95.1 73 64.4
HPP92_027733 Vanilla planifolia HOM05D005146 ORTHO05D006752 8.2e-18 94.7 73 64.4
ATR0816G001 Amborella trichopoda HOM05D005146 ORTHO05D006752 1.1e-17 94.4 73 63.0
Phvul.001G002400 Phaseolus vulgaris HOM05D005146 ORTHO05D006752 1.1e-17 94.4 73 65.8
SGA_v2.0_scaffold12G05971 Striga asiatica HOM05D005146 ORTHO05D006752 1.1e-17 94.4 73 64.4
Ah.08g209140 Amaranthus hybridus HOM05D005146 ORTHO05D006752 1.4e-17 94.0 73 63.0
VMungo0251G0853 Vigna mungo HOM05D005146 ORTHO05D006752 1.8e-17 93.6 73 64.4
Zm00001eb017150 Zea mays HOM05D005146 ORTHO05D006752 1.8e-17 93.6 73 63.0
HanXRQChr06g0183611 Helianthus annuus HOM05D005146 ORTHO05D006752 3.1e-17 92.8 73 61.6
ATR0797G002 Amborella trichopoda HOM05D005146 ORTHO05D006752 4.1e-17 92.4 73 63.0
FvH4_2g38650 Fragaria vesca HOM05D005146 ORTHO05D006752 4.1e-17 92.4 73 63.0
FAN15G2679 Fragaria x ananassa HOM05D005146 ORTHO05D006752 4.1e-17 92.4 73 63.0
FAN27G1976 Fragaria x ananassa HOM05D005146 ORTHO05D006752 4.1e-17 92.4 73 63.0
Aqoxy5G01768 Aquilegia oxysepala HOM05D005146 ORTHO05D006752 5.3e-17 92.0 73 58.9
A01p06490 Brassica napus HOM05D005146 ORTHO05D006752 5.3e-17 92.0 73 61.6
BraA01t00610Z Brassica rapa HOM05D005146 ORTHO05D006752 5.3e-17 92.0 73 61.6
FAN20G2808 Fragaria x ananassa HOM05D005146 ORTHO05D006752 5.3e-17 92.0 73 63.0
Medtr1g107520 Medicago truncatula HOM05D005146 ORTHO05D006752 5.3e-17 92.0 68 69.1
unitig_746.g26814 Utricularia gibba HOM05D005146 ORTHO05D006752 5.3e-17 92.0 73 61.6
BcaC09g51970 Brassica carinata HOM05D005146 ORTHO05D006752 7.0e-17 91.7 73 60.3
C01p07160 Brassica napus HOM05D005146 ORTHO05D006752 7.0e-17 91.7 73 60.3
BolC1t00708H Brassica oleracea HOM05D005146 ORTHO05D006752 7.0e-17 91.7 73 60.3
Os03g0355800 Oryza sativa ssp. japonica HOM05D005146 ORTHO05D006752 9.1e-17 91.3 73 61.6
BcaNung05185 Brassica carinata HOM05D005146 ORTHO05D006752 1.2e-16 90.9 73 60.3
CSS0032399 Camellia sinensis var. sinensis HOM05D005146 ORTHO05D006752 2.0e-16 90.1 73 64.4
MELO3C033356.2 Cucumis melo HOM05D005146 ORTHO05D166957 2.0e-16 90.1 59 79.7
MBI09_g15694_MAGBIO Magnolia biondii HOM05D005146 ORTHO05D006752 2.0e-16 90.1 73 58.9
Peaxi162Scf00438g00626 Petunia axillaris HOM05D005146 ORTHO05D006752 2.0e-16 90.1 73 57.5
Lj1g0002754 Lotus japonicus HOM05D005146 ORTHO05D006752 4.5e-16 89.0 73 63.0
CARHR239690 Cardamine hirsuta HOM05D005146 ORTHO05D006752 5.9e-16 88.6 73 60.3
AT4G31790 Arabidopsis thaliana HOM05D005146 ORTHO05D006752 7.7e-16 88.2 73 60.3
Carub.0007s0877 Capsella rubella HOM05D005146 ORTHO05D006752 1.0e-15 87.8 73 58.9
Sp7g29580 Schrenkiella parvula HOM05D005146 ORTHO05D006752 1.0e-15 87.8 73 58.9
AL7G20220 Arabidopsis lyrata HOM05D005146 ORTHO05D006752 1.3e-15 87.4 73 60.3
Lj5g0000481 Lotus japonicus HOM05D005146 ORTHO05D006752 1.3e-15 87.4 73 61.6
Pp3c25_4490 Physcomitrium patens HOM05D005146 ORTHO05D006752 1.3e-15 87.4 73 57.5
Thhalv10025950m.g Eutrema salsugineum HOM05D005146 ORTHO05D006752 1.7e-15 87.0 73 60.3
Mapoly0107s0028 Marchantia polymorpha HOM05D005146 ORTHO05D006752 2.2e-15 86.7 73 56.2
HPP92_026026 Vanilla planifolia HOM05D005146 ORTHO05D006752 2.9e-15 86.3 66 66.7
RcHm_v2.0_Chr7g0221331 Rosa chinensis HOM05D005146 ORTHO05D006752 3.8e-15 85.9 74 58.1
Aa31LG2G18510 Aethionema arabicum HOM05D005146 ORTHO05D006752 5.0e-15 85.5 73 58.9
SEGI_30125 Sequoiadendron giganteum HOM05D005146 ORTHO05D006752 6.5e-15 85.1 84 52.4
AagrBONN_evm.TU.Sc2ySwM_117.1420 Anthoceros agrestis HOM05D005146 ORTHO05D006752 4.2e-14 82.4 73 53.4
AagrBONN_evm.TU.Sc2ySwM_368.2751 Anthoceros agrestis HOM05D005146 ORTHO05D006752 4.2e-14 82.4 73 53.4
Lj4A797T61 Lonicera japonica HOM05D005146 ORTHO05D006752 2.7e-13 79.7 62 66.1
SalBow3G2629 Salvia bowleyana HOM05D005146 ORTHO05D006752 2.7e-13 79.7 62 62.9
Oeu039057.1 Olea europaea HOM05D005146 ORTHO05D006752 3.0e-12 76.3 62 64.5
Medtr3g114210 Medicago truncatula HOM05D005146 ORTHO05D006752 5.2e-12 75.5 61 65.6
CBR_g41468 Chara braunii HOM05D005146 ORTHO05D006752 2.6e-11 73.2 89 47.2
CDE05G1835 Ceratophyllum demersum HOM05D005146 ORTHO05D006752 3.3e-11 72.8 62 61.3
SMO146G0393 Selaginella moellendorffii HOM05D005146 ORTHO05D006752 7.4e-11 71.6 89 43.8
Cre05.g233300 Chlamydomonas reinhardtii HOM05D005146 ORTHO05D006752 2.8e-10 69.7 73 52.1
MCO08G273 Micromonas commoda HOM05D005146 ORTHO05D006752 9.1e-09 64.7 72 47.2
PRCOL_00004436 Prasinoderma coloniale HOM05D005146 ORTHO05D006752 5.9e-08 62.0 75 48.0
Duzib150G0501 Durio zibethinus HOM05D005146 ORTHO05D006752 1.7e-07 60.5 73 49.3
Haze_26822 Corylus avellana HOM05D005146 ORTHO05D006752 2.2e-07 60.1 70 48.6
Gorai.004G015300 Gossypium raimondii HOM05D005146 ORTHO05D006752 2.2e-07 60.1 73 49.3
Hma1.2p1_0638F.1_g193760 Hydrangea macrophylla HOM05D005146 ORTHO05D006752 2.9e-07 59.7 42 66.7
CSS0002428 Camellia sinensis var. sinensis HOM05D005146 ORTHO05D006752 1.5e-06 57.4 55 56.4
Duzib170G0783 Durio zibethinus HOM05D005146 ORTHO05D006752 2.5e-06 56.6 73 46.6
vmacro21720 Vaccinium macrocarpon HOM05D005146 ORTHO05D006752 4.2e-06 55.8 42 64.3


User provided reference genes

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