Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C032039.2 Cucumis melo HOM05D003026 ORTHO05D007420 3.0e-61 238.4 127 100.0
CsaV3_3G037310 Cucumis sativus L. HOM05D003026 ORTHO05D007420 3.5e-38 161.8 102 80.4
Sed0018407 Sechium edule HOM05D003026 ORTHO05D007420 9.9e-33 143.7 97 79.4
ClCG10G018940 Citrullus lanatus HOM05D003026 ORTHO05D007420 8.7e-29 130.6 70 84.3
CiPaw.10G010100 Carya illinoinensis HOM05D003026 ORTHO05D007420 3.7e-27 125.2 102 63.7
CANSAT64G0205 Cannabis sativa HOM05D003026 ORTHO05D007420 2.4e-26 122.5 97 60.8
Hma1.2p1_1032F.1_g250090 Hydrangea macrophylla HOM05D003026 ORTHO05D007420 2.4e-26 122.5 103 63.1
Lj2A138T45 Lonicera japonica HOM05D003026 ORTHO05D007420 1.5e-25 119.8 97 61.9
Actinidia05425 Actinidia chinensis HOM05D003026 ORTHO05D007420 2.6e-25 119.0 97 63.9
AUR62006187 Chenopodium quinoa HOM05D003026 ORTHO05D007420 5.8e-25 117.9 102 61.8
Dinv31689 Davidia involucrata HOM05D003026 ORTHO05D007420 1.7e-24 116.3 92 63.0
RcHm_v2.0_Chr3g0473831 Rosa chinensis HOM05D003026 ORTHO05D007420 2.9e-24 115.5 103 59.2
Cfa016613 Carpinus fangiana HOM05D003026 ORTHO05D007420 3.8e-24 115.2 79 65.8
CSS0023185 Camellia sinensis var. sinensis HOM05D003026 ORTHO05D007420 8.4e-24 114.0 102 57.8
AUR62028521 Chenopodium quinoa HOM05D003026 ORTHO05D007420 8.4e-24 114.0 94 60.6
Duzib106G1381 Durio zibethinus HOM05D003026 ORTHO05D007420 8.4e-24 114.0 104 51.9
Atru.chr8.1527 Acer truncatum HOM05D003026 ORTHO05D007420 1.1e-23 113.6 98 55.1
Hund19928 Selenicereus undatus HOM05D003026 ORTHO05D007420 1.1e-23 113.6 72 73.6
TAR633G2736 Trochodendron aralioides HOM05D003026 ORTHO05D007420 1.1e-23 113.6 97 56.7
Prupe.7G109400 Prunus persica HOM05D003026 ORTHO05D007420 3.2e-23 112.1 102 57.8
FAN05G4170 Fragaria x ananassa HOM05D003026 ORTHO05D007420 4.2e-23 111.7 70 71.4
FAN05G4542 Fragaria x ananassa HOM05D003026 ORTHO05D007420 4.2e-23 111.7 70 71.4
Haze_19617 Corylus avellana HOM05D003026 ORTHO05D007420 7.1e-23 110.9 70 68.6
PGSC0003DMG402008955 Solanum tuberosum HOM05D003026 ORTHO05D007420 7.1e-23 110.9 104 55.8
Nn2g14167 Nelumbo nucifera HOM05D003026 ORTHO05D007420 9.3e-23 110.5 104 56.7
GSVIVG01033851001 Vitis vinifera HOM05D003026 ORTHO05D007420 1.2e-22 110.2 104 55.8
PGR142G0893 Punica granatum HOM05D003026 ORTHO05D007420 1.6e-22 109.8 106 54.7
Aqoxy4G02772 Aquilegia oxysepala HOM05D003026 ORTHO05D007420 2.1e-22 109.4 69 69.6
EL10Ac7g16913 Beta vulgaris HOM05D003026 ORTHO05D007420 2.1e-22 109.4 70 68.6
Duzib128G0191 Durio zibethinus HOM05D003026 ORTHO05D007420 2.1e-22 109.4 105 52.4
Ciclev10012144m.g Citrus clementina HOM05D003026 ORTHO05D007420 4.6e-22 108.2 70 67.1
Cpa.g.sc5.14 Carica papaya HOM05D003026 ORTHO05D007420 6.0e-22 107.8 108 52.8
Manes.08G025800 Manihot esculenta HOM05D003026 ORTHO05D007420 6.0e-22 107.8 97 56.7
Potri.006G213000 Populus trichocarpa HOM05D003026 ORTHO05D007420 7.9e-22 107.5 98 57.1
Thecc.05G089900 Theobroma cacao HOM05D003026 ORTHO05D007420 7.9e-22 107.5 105 51.4
Oeu017681.1 Olea europaea HOM05D003026 ORTHO05D007420 1.0e-21 107.1 104 53.8
TWI74G1087 Tripterygium wilfordii HOM05D003026 ORTHO05D007420 1.0e-21 107.1 99 55.6
FvH4_6g18820 Fragaria vesca HOM05D003026 ORTHO05D007420 1.3e-21 106.7 102 52.9
FAN02G1538 Fragaria x ananassa HOM05D003026 ORTHO05D007420 1.3e-21 106.7 102 52.9
FAN14G2975 Fragaria x ananassa HOM05D003026 ORTHO05D007420 1.3e-21 106.7 102 52.9
Lsat_1_v5_gn_5_164920 Lactuca sativa HOM05D003026 ORTHO05D007420 1.3e-21 106.7 94 57.4
DCAR_020745 Daucus carota HOM05D003026 ORTHO05D007420 2.3e-21 105.9 104 52.9
Solyc09g009820.4 Solanum lycopersicum HOM05D003026 ORTHO05D007420 3.0e-21 105.5 104 52.9
Sopen09g004580 Solanum pennellii HOM05D003026 ORTHO05D007420 3.0e-21 105.5 104 52.9
Ah.08g210550 Amaranthus hybridus HOM05D003026 ORTHO05D007420 1.5e-20 103.2 94 53.2
QL07p038951 Quercus lobata HOM05D003026 ORTHO05D007420 1.5e-20 103.2 106 51.9
Gohir.D01G195500 Gossypium hirsutum HOM05D003026 ORTHO05D007420 2.5e-20 102.4 70 62.9
Gorai.002G239700 Gossypium raimondii HOM05D003026 ORTHO05D007420 2.5e-20 102.4 70 62.9
Sabra06G0164000 Salix brachista HOM05D003026 ORTHO05D007420 2.5e-20 102.4 67 65.7
VMungo0720G1134 Vigna mungo HOM05D003026 ORTHO05D007420 4.3e-20 101.7 94 53.2
ATR0776G099 Amborella trichopoda HOM05D003026 ORTHO05D007420 5.7e-20 101.3 99 54.5
ECA248G1469 Erigeron canadensis HOM05D003026 ORTHO05D007420 7.4e-20 100.9 99 54.5
PSO339G1943 Papaver somniferum HOM05D003026 ORTHO05D007420 7.4e-20 100.9 97 52.6
PSO384G4335 Papaver somniferum HOM05D003026 ORTHO05D007420 7.4e-20 100.9 97 52.6
Gohir.A01G206100 Gossypium hirsutum HOM05D003026 ORTHO05D007420 1.3e-19 100.1 70 62.9
Glyma.13G154000 Glycine max HOM05D003026 ORTHO05D007420 6.3e-19 97.8 93 50.5
MBI17_g08339_MAGBIO Magnolia biondii HOM05D003026 ORTHO05D007420 8.2e-19 97.4 88 54.5
C09p73050 Brassica napus HOM05D003026 ORTHO05D007420 1.1e-18 97.1 98 49.0
COL.COLO4_29725 Corchorus olitorius HOM05D003026 ORTHO05D007420 1.1e-18 97.1 103 46.6
BolC9t60039H Brassica oleracea HOM05D003026 ORTHO05D007420 1.4e-18 96.7 98 49.0
Carub.0006s0282 Capsella rubella HOM05D003026 ORTHO05D007420 2.4e-18 95.9 98 51.0
Eucgr.K02032 Eucalyptus grandis HOM05D003026 ORTHO05D007420 2.4e-18 95.9 104 51.9
BcaC06g32091 Brassica carinata HOM05D003026 ORTHO05D007420 3.1e-18 95.5 98 48.0
A10p32240 Brassica napus HOM05D003026 ORTHO05D007420 4.1e-18 95.1 98 49.0
BraA10t45267Z Brassica rapa HOM05D003026 ORTHO05D007420 4.1e-18 95.1 98 49.0
Duzib093G0165 Durio zibethinus HOM05D003026 ORTHO05D007420 4.1e-18 95.1 65 66.2
MSTRG.5846 Avicennia marina HOM05D003026 ORTHO05D007420 6.9e-18 94.4 69 59.4
A03p01460 Brassica napus HOM05D003026 ORTHO05D007420 6.9e-18 94.4 107 46.7
CARHR209380 Cardamine hirsuta HOM05D003026 ORTHO05D007420 6.9e-18 94.4 93 50.5
Migut.J01030 Erythranthe guttata HOM05D003026 ORTHO05D007420 6.9e-18 94.4 69 59.4
unitig_744.g24699 Utricularia gibba HOM05D003026 ORTHO05D007420 6.9e-18 94.4 69 60.9
MD12G1036800 Malus domestica HOM05D003026 ORTHO05D007420 9.0e-18 94.0 60 73.3
SalBow3G1828 Salvia bowleyana HOM05D003026 ORTHO05D007420 9.0e-18 94.0 69 59.4
AL6G13460 Arabidopsis lyrata HOM05D003026 ORTHO05D007420 1.2e-17 93.6 98 49.0
AT5G03880 Arabidopsis thaliana HOM05D003026 ORTHO05D007420 1.2e-17 93.6 97 49.5
C03p01790 Brassica napus HOM05D003026 ORTHO05D007420 1.2e-17 93.6 98 49.0
BolC3t12735H Brassica oleracea HOM05D003026 ORTHO05D007420 1.2e-17 93.6 98 49.0
Glyma.U031117 Glycine max HOM05D003026 ORTHO05D007420 1.2e-17 93.6 91 52.7
Sc07g0005610 Simmondsia chinensis HOM05D003026 ORTHO05D007420 1.2e-17 93.6 69 63.8
Aa31LG1G21390 Aethionema arabicum HOM05D003026 ORTHO05D007420 1.5e-17 93.2 98 48.0
MD14G1023500 Malus domestica HOM05D003026 ORTHO05D007420 2.6e-17 92.4 60 71.7
SGA_v2.0_scaffold31G12914 Striga asiatica HOM05D003026 ORTHO05D007420 2.6e-17 92.4 69 60.9
BraA03t09525Z Brassica rapa HOM05D003026 ORTHO05D007420 3.4e-17 92.0 107 45.8
Thhalv10014048m.g Eutrema salsugineum HOM05D003026 ORTHO05D007420 3.4e-17 92.0 79 55.7
BcaB01g05776 Brassica carinata HOM05D003026 ORTHO05D007420 4.5e-17 91.7 98 46.9
Cc06_g05870 Coffea canephora HOM05D003026 ORTHO05D007420 5.9e-17 91.3 60 68.3
Phvul.007G227400 Phaseolus vulgaris HOM05D003026 ORTHO05D007420 1.0e-16 90.5 62 62.9
Sp6g38850 Schrenkiella parvula HOM05D003026 ORTHO05D007420 1.7e-16 89.7 98 49.0
Ca_03916_v3 Cicer arietinum L. HOM05D003026 ORTHO05D007420 2.2e-16 89.4 65 61.5
Psat6g081240 Pisum sativum HOM05D003026 ORTHO05D007420 2.9e-16 89.0 64 59.4
HanXRQChr01g0010391 Helianthus annuus HOM05D003026 ORTHO05D007420 4.2e-15 85.1 97 45.4
THA.LOC104827511 Tarenaya hassleriana HOM05D003026 ORTHO05D007420 5.5e-15 84.7 98 46.9
TPR.G9898 Trifolium pratense HOM05D003026 ORTHO05D007420 7.2e-15 84.3 86 46.5
CDE08G0919 Ceratophyllum demersum HOM05D003026 ORTHO05D007420 3.6e-14 82.0 99 49.5
Lalb_Chr21g0315821 Lupinus albus HOM05D003026 ORTHO05D007420 3.6e-14 82.0 102 46.1
Lalb_Chr02g0154931 Lupinus albus HOM05D003026 ORTHO05D007420 6.1e-14 81.3 96 49.0
Zm00001eb039430 Zea mays HOM05D003026 ORTHO05D007420 6.1e-14 81.3 87 48.3
Zm00001eb039460 Zea mays HOM05D003026 ORTHO05D007420 6.1e-14 81.3 87 48.3
Zm00001eb039500 Zea mays HOM05D003026 ORTHO05D007420 6.1e-14 81.3 87 48.3
Zm00001eb039530 Zea mays HOM05D003026 ORTHO05D007420 6.1e-14 81.3 87 48.3
Medtr1g059970 Medicago truncatula HOM05D003026 ORTHO05D007420 7.9e-14 80.9 60 56.7
CAN.G397.53 Capsicum annuum HOM05D003026 ORTHO05D007420 1.4e-13 80.1 103 45.6
HPP92_000007 Vanilla planifolia HOM05D003026 ORTHO05D007420 3.0e-13 79.0 67 52.2
Peaxi162Scf00096g00414 Petunia axillaris HOM05D003026 ORTHO05D007420 1.5e-12 76.6 93 47.3
AagrBONN_evm.TU.Sc2ySwM_228.4756 Anthoceros agrestis HOM05D003026 ORTHO05D007420 1.9e-12 76.3 65 53.8
vmacro07410 Vaccinium macrocarpon HOM05D003026 ORTHO05D007420 1.9e-12 76.3 79 51.9
Os08g0558200 Oryza sativa ssp. japonica HOM05D003026 ORTHO05D007420 3.7e-11 72.0 65 52.3
Peaxi162Scf00404g00079 Petunia axillaris HOM05D003026 ORTHO05D007420 1.8e-10 69.7 100 44.0
Lj5g0023671 Lotus japonicus HOM05D003026 ORTHO05D007420 6.9e-10 67.8 64 48.4
arahy.Tifrunner.gnm1.ann1.63YKCR Arachis hypogaea HOM05D003026 ORTHO05D007420 3.4e-09 65.5 70 45.7
arahy.Tifrunner.gnm1.ann1.JVNF3F Arachis hypogaea HOM05D003026 ORTHO05D007420 3.4e-09 65.5 70 45.7
Mapoly0060s0005 Marchantia polymorpha HOM05D003026 ORTHO05D007420 7.7e-09 64.3 59 52.5
SMO228G0134 Selaginella moellendorffii HOM05D003026 ORTHO05D007420 2.5e-07 59.3 52 48.1
Zm00001eb176040 Zea mays HOM05D003026 ORTHO05D007420 2.7e-06 55.8 46 54.3


User provided reference genes

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