Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C031967.2 Cucumis melo HOM05D005133 ORTHO05D165940 3.4e-92 341.7 176 100.0
MELO3C033909.2 Cucumis melo HOM05D005133 ORTHO05D020525 7.1e-37 157.9 190 52.1
MELO3C030134.2 Cucumis melo HOM05D005133 ORTHO05D006685 1.4e-32 143.7 130 65.4
MELO3C032291.2 Cucumis melo HOM05D005133 ORTHO05D167678 1.5e-26 123.6 132 58.3
MELO3C006074.2 Cucumis melo HOM05D005133 ORTHO05D006685 2.0e-15 86.7 78 61.5
CsaV3_3G008530 Cucumis sativus L. HOM05D005133 ORTHO05D006685 4.5e-15 85.5 65 73.8
MELO3C030086.2 Cucumis melo HOM05D005133 ORTHO05D167493 2.9e-14 82.8 46 91.3
MELO3C030860.2 Cucumis melo HOM05D005133 ORTHO05D006685 1.4e-13 80.5 131 44.3
ClCG05G014200 Citrullus lanatus HOM05D005133 ORTHO05D006685 9.3e-13 77.8 77 66.2
Sed0023612 Sechium edule HOM05D005133 ORTHO05D006685 1.5e-10 70.5 66 65.2
MELO3C027575.2 Cucumis melo HOM05D019030 ORTHO05D006685 2.5e-10 69.7 61 67.2
Oeu015214.1 Olea europaea HOM05D005133 ORTHO05D006685 6.2e-09 65.1 68 54.4
MELO3C033838.2 Cucumis melo HOM05D005133 ORTHO05D166559 8.1e-09 64.7 73 53.4
Thecc.01G351000 Theobroma cacao HOM05D005133 ORTHO05D006685 8.1e-09 64.7 75 58.7
Cpa.g.sc11.53 Carica papaya HOM05D005133 ORTHO05D006685 1.4e-08 63.9 56 69.6
Ciclev10020434m.g Citrus clementina HOM05D005133 ORTHO05D006685 1.4e-08 63.9 72 55.6
Dinv43872 Davidia involucrata HOM05D005133 ORTHO05D006685 2.4e-08 63.2 75 56.0
Gohir.A07G140500 Gossypium hirsutum HOM05D005133 ORTHO05D006685 2.4e-08 63.2 75 57.3
Haze_15576 Corylus avellana HOM05D005133 ORTHO05D006685 3.1e-08 62.8 69 56.5
Haze_14198 Corylus avellana HOM05D005133 ORTHO05D006685 4.0e-08 62.4 75 54.7
Peaxi162Scf00020g01713 Petunia axillaris HOM05D005133 ORTHO05D006685 5.3e-08 62.0 56 66.1
CSS0000155 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 6.9e-08 61.6 56 67.9
CSS0009332 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 6.9e-08 61.6 56 67.9
Cfa007878 Carpinus fangiana HOM05D005133 ORTHO05D006685 6.9e-08 61.6 76 53.9
COL.COLO4_06373 Corchorus olitorius HOM05D005133 ORTHO05D006685 6.9e-08 61.6 54 68.5
Lj7C506T5 Lonicera japonica HOM05D005133 ORTHO05D006685 6.9e-08 61.6 75 53.3
Manes.01G251600 Manihot esculenta HOM05D005133 ORTHO05D006685 6.9e-08 61.6 59 62.7
Nitab4.5_0000915g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 6.9e-08 61.6 59 62.7
Solyc01g095230.4 Solanum lycopersicum HOM05D005133 ORTHO05D006685 6.9e-08 61.6 56 67.9
Sopen01g039020 Solanum pennellii HOM05D005133 ORTHO05D006685 6.9e-08 61.6 56 67.9
PGSC0003DMG401000198 Solanum tuberosum HOM05D005133 ORTHO05D006685 6.9e-08 61.6 56 67.9
Atru.chr5.593 Acer truncatum HOM05D005133 ORTHO05D006685 9.0e-08 61.2 63 63.5
Gohir.D07G145800 Gossypium hirsutum HOM05D005133 ORTHO05D006685 9.0e-08 61.2 67 61.2
Gorai.001G158000 Gossypium raimondii HOM05D005133 ORTHO05D006685 9.0e-08 61.2 67 61.2
Dinv32531 Davidia involucrata HOM05D005133 ORTHO05D006685 1.2e-07 60.8 132 42.4
Nitab4.5_0003501g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 1.5e-07 60.5 59 61.0
QL07p038619 Quercus lobata HOM05D005133 ORTHO05D006685 1.5e-07 60.5 56 62.5
Cfa003860 Carpinus fangiana HOM05D005133 ORTHO05D006685 2.6e-07 59.7 64 56.2
Prupe.2G179100 Prunus persica HOM05D005133 ORTHO05D006685 2.6e-07 59.7 59 55.9
RcHm_v2.0_Chr1g0358091 Rosa chinensis HOM05D005133 ORTHO05D006685 2.6e-07 59.7 83 48.2
Duzib133G0222 Durio zibethinus HOM05D005133 ORTHO05D006685 3.4e-07 59.3 70 55.7
LjContig00310g0005517 Lotus japonicus HOM05D005133 ORTHO05D006685 3.4e-07 59.3 56 64.3
Ca_20805_v3 Cicer arietinum L. HOM05D005133 ORTHO05D006685 4.5e-07 58.9 56 64.3
Glyma.12G050200 Glycine max HOM05D005133 ORTHO05D006685 4.5e-07 58.9 56 64.3
Potri.014G091400 Populus trichocarpa HOM05D005133 ORTHO05D006685 4.5e-07 58.9 56 64.3
MSTRG.20869 Avicennia marina HOM05D005133 ORTHO05D006685 5.8e-07 58.5 68 55.9
SalBow1G3823 Salvia bowleyana HOM05D005133 ORTHO05D006685 5.8e-07 58.5 66 54.5
RcHm_v2.0_Chr1g0357891 Rosa chinensis HOM05D005133 ORTHO05D006685 7.6e-07 58.2 59 57.6
RcHm_v2.0_Chr1g0358181 Rosa chinensis HOM05D005133 ORTHO05D006685 7.6e-07 58.2 95 38.9
TAR375G0148 Trochodendron aralioides HOM05D005133 ORTHO05D006685 7.6e-07 58.2 55 65.5
GSVIVG01027010001 Vitis vinifera HOM05D005133 ORTHO05D006685 7.6e-07 58.2 56 62.5
CSS0040148 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 9.9e-07 57.8 75 53.3
CiPaw.02G036200 Carya illinoinensis HOM05D005133 ORTHO05D006685 9.9e-07 57.8 56 62.5
MD07G1130200 Malus domestica HOM05D005133 ORTHO05D006685 9.9e-07 57.8 59 57.6
Sabra14G0066300 Salix brachista HOM05D005133 ORTHO05D006685 9.9e-07 57.8 49 67.3
Actinidia20170 Actinidia chinensis HOM05D005133 ORTHO05D006685 1.3e-06 57.4 56 62.5
Medtr4g068010 Medicago truncatula HOM05D005133 ORTHO05D006685 1.3e-06 57.4 94 44.7
TPR.G34211 Trifolium pratense HOM05D005133 ORTHO05D006685 2.2e-06 56.6 56 60.7
CANSAT01G0674 Cannabis sativa HOM05D005133 ORTHO05D006685 2.9e-06 56.2 64 59.4
Cc06_g17440 Coffea canephora HOM05D005133 ORTHO05D006685 2.9e-06 56.2 53 64.2
Haze_15581 Corylus avellana HOM05D005133 ORTHO05D006685 2.9e-06 56.2 65 55.4
Rhsim07G0009300 Rhododendron simsii HOM05D005133 ORTHO05D006685 2.9e-06 56.2 55 63.6
VMungo1127G1104 Vigna mungo HOM05D005133 ORTHO05D006685 2.9e-06 56.2 56 60.7
Phvul.011G052300 Phaseolus vulgaris HOM05D005133 ORTHO05D006685 3.8e-06 55.8 56 60.7
Psat7g208960 Pisum sativum HOM05D005133 ORTHO05D006685 3.8e-06 55.8 100 43.0
SalBow3G2243 Salvia bowleyana HOM05D005133 ORTHO05D006685 3.8e-06 55.8 59 57.6
Rhsim01G0168000 Rhododendron simsii HOM05D005133 ORTHO05D006685 4.9e-06 55.5 56 60.7
Migut.B01807 Erythranthe guttata HOM05D005133 ORTHO05D006685 6.4e-06 55.1 53 56.6
Migut.H02011 Erythranthe guttata HOM05D005133 ORTHO05D006685 6.4e-06 55.1 57 56.1
PSO135G0656 Papaver somniferum HOM05D005133 ORTHO05D006685 6.4e-06 55.1 56 60.7
unitig_0.g335 Utricularia gibba HOM05D005133 ORTHO05D006685 6.4e-06 55.1 66 53.0
Ah.05g180080 Amaranthus hybridus HOM05D005133 ORTHO05D006685 8.4e-06 54.7 54 63.0
Aqoxy3G00498 Aquilegia oxysepala HOM05D005133 ORTHO05D006685 8.4e-06 54.7 74 51.4
Migut.B01808 Erythranthe guttata HOM05D005133 ORTHO05D006685 8.4e-06 54.7 57 56.1
PSO478G1127 Papaver somniferum HOM05D005133 ORTHO05D006685 8.4e-06 54.7 56 60.7
HPP92_023966 Vanilla planifolia HOM05D005133 ORTHO05D006685 8.4e-06 54.7 54 63.0


User provided reference genes

Program Settings