Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C031741.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.7e-41 172.2 82 100.0
MELO3C027159.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.0e-22 109.8 62 80.6
MELO3C027711.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.8e-22 109.0 62 80.6
MELO3C027567.2 Cucumis melo HOM05D000176 ORTHO05D000106 3.9e-22 107.8 62 79.0
MELO3C027326.2 Cucumis melo HOM05D000176 ORTHO05D000106 5.1e-22 107.5 62 77.4
MELO3C000086.2 Cucumis melo HOM05D000176 ORTHO05D000106 6.7e-22 107.1 62 79.0
MELO3C027673.2 Cucumis melo HOM05D000176 ORTHO05D000106 8.7e-22 106.7 62 74.2
MELO3C027426.2 Cucumis melo HOM05D000176 ORTHO05D000106 3.7e-20 101.3 56 82.1
MELO3C033156.2 Cucumis melo HOM05D000176 ORTHO05D000106 2.4e-19 98.6 62 75.8
MELO3C033022.2 Cucumis melo HOM05D000176 ORTHO05D000106 4.5e-18 94.4 52 82.7
CsaV3_1G024380 Cucumis sativus L. HOM05D000176 ORTHO05D000106 2.9e-17 91.7 62 66.1
CsaV3_6G016110 Cucumis sativus L. HOM05D000176 ORTHO05D000106 2.9e-17 91.7 62 66.1
MELO3C029097.2 Cucumis melo HOM05D000176 ORTHO05D000106 4.6e-15 84.3 42 88.1
CsaV3_5G039840 Cucumis sativus L. HOM05D000176 ORTHO05D000106 3.9e-14 81.3 62 59.7
MELO3C033541.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.1e-13 79.7 63 61.9
MELO3C031271.2 Cucumis melo HOM05D000176 ORTHO05D000106 3.7e-12 74.7 40 82.5
QL07p004315 Quercus lobata HOM05D000176 ORTHO05D000106 3.7e-12 74.7 63 58.7
QL93p0107_0380 Quercus lobata HOM05D000370 ORTHO05D001335 3.7e-12 74.7 63 58.7
QL01p024632 Quercus lobata HOM05D000176 ORTHO05D000106 1.1e-11 73.2 61 55.7
QL03p010974 Quercus lobata HOM05D003881 ORTHO05D004343 1.8e-11 72.4 56 60.7
QL04p053141 Quercus lobata HOM05D000176 ORTHO05D000106 1.8e-11 72.4 58 60.3
QL04p066053 Quercus lobata HOM05D000176 ORTHO05D000106 1.8e-11 72.4 58 60.3
QL05p078397 Quercus lobata HOM05D000070 ORTHO05D000106 1.8e-11 72.4 58 60.3
QL06p040368 Quercus lobata HOM05D000176 ORTHO05D000106 1.8e-11 72.4 58 60.3
QL09p008289 Quercus lobata HOM05D001043 ORTHO05D000106 1.8e-11 72.4 58 60.3
QL09p009005 Quercus lobata HOM05D000176 ORTHO05D000106 1.8e-11 72.4 56 60.7
QL10p021459 Quercus lobata HOM05D000176 ORTHO05D000106 1.8e-11 72.4 56 60.7
QL12p023375 Quercus lobata HOM05D000176 ORTHO05D000106 1.8e-11 72.4 58 60.3
QL12p031843 Quercus lobata HOM05D000176 ORTHO05D000106 1.8e-11 72.4 58 60.3
QL93p0164_0014 Quercus lobata HOM05D000176 ORTHO05D000106 1.8e-11 72.4 58 60.3
QL03p030217 Quercus lobata HOM05D000176 ORTHO05D000106 3.1e-11 71.6 56 60.7
QL03p015444 Quercus lobata HOM05D000176 ORTHO05D000106 4.0e-11 71.2 58 60.3
QL04p089247 Quercus lobata HOM05D000176 ORTHO05D000106 4.0e-11 71.2 58 60.3
QL05p031734 Quercus lobata HOM05D000176 ORTHO05D000106 4.0e-11 71.2 58 60.3
QL93p2017_0003 Quercus lobata HOM05D000176 ORTHO05D000106 4.0e-11 71.2 58 60.3
MELO3C029728.2 Cucumis melo HOM05D000176 ORTHO05D000106 5.3e-11 70.9 36 86.1
QL02p053683 Quercus lobata HOM05D000176 ORTHO05D000106 5.3e-11 70.9 56 58.9
QL93p0869_0056 Quercus lobata HOM05D000176 ORTHO05D000106 6.9e-11 70.5 58 58.6
ClCG06G006800 Citrullus lanatus HOM05D000176 ORTHO05D000013 9.0e-11 70.1 58 58.6
QL02p000127 Quercus lobata HOM05D003289 ORTHO05D004594 9.0e-11 70.1 58 58.6
QL05p088131 Quercus lobata HOM05D000176 ORTHO05D000106 9.0e-11 70.1 55 58.2
QL06p043010 Quercus lobata HOM05D000529 ORTHO05D000472 9.0e-11 70.1 55 58.2
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 9.0e-11 70.1 55 58.2
QL01p023632 Quercus lobata HOM05D000176 ORTHO05D000106 1.2e-10 69.7 56 57.1
MELO3C027447.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.5e-10 69.3 36 86.1
QL02p018295 Quercus lobata HOM05D000176 ORTHO05D000106 2.0e-10 68.9 55 58.2
QL11p043362 Quercus lobata HOM05D000176 ORTHO05D000106 2.0e-10 68.9 55 58.2
QL08p003473 Quercus lobata HOM05D000176 ORTHO05D005465 2.6e-10 68.6 56 58.9
QL09p040375 Quercus lobata HOM05D000176 ORTHO05D000106 2.6e-10 68.6 56 58.9
QL01p018788 Quercus lobata HOM05D000176 ORTHO05D000106 4.5e-10 67.8 60 53.3
QL12p004084 Quercus lobata HOM05D000176 ORTHO05D000106 4.5e-10 67.8 56 58.9
QL01p028314 Quercus lobata HOM05D000176 ORTHO05D000106 7.6e-10 67.0 56 57.1
QL10p044969 Quercus lobata HOM05D000176 ORTHO05D000106 7.6e-10 67.0 56 57.1
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 3.8e-09 64.7 56 57.1
Sp1g35090 Schrenkiella parvula HOM05D000176 ORTHO05D003511 3.8e-09 64.7 62 50.0
DCAR_030358 Daucus carota HOM05D000176 ORTHO05D000106 5.0e-09 64.3 60 48.3
QL03p014985 Quercus lobata HOM05D001365 ORTHO05D001291 5.0e-09 64.3 56 53.6
Aa31LG10G5620 Aethionema arabicum HOM05D000176 ORTHO05D003511 6.5e-09 63.9 62 46.8
THA.LOC104802612 Tarenaya hassleriana HOM05D000176 ORTHO05D003511 6.5e-09 63.9 62 48.4
A06p04680 Brassica napus HOM05D000176 ORTHO05D003511 8.4e-09 63.5 62 48.4
C06p02530 Brassica napus HOM05D000176 ORTHO05D003511 8.4e-09 63.5 62 48.4
BolC6t35381H Brassica oleracea HOM05D000176 ORTHO05D003511 8.4e-09 63.5 62 48.4
BraA06t23671Z Brassica rapa HOM05D000176 ORTHO05D003511 8.4e-09 63.5 62 48.4
ClCG01G008600 Citrullus lanatus HOM05D000176 ORTHO05D000106 8.4e-09 63.5 58 53.4
QL09p045979 Quercus lobata HOM05D000176 ORTHO05D000106 8.4e-09 63.5 72 44.4
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 8.4e-09 63.5 56 55.4
Thhalv10011184m.g Eutrema salsugineum HOM05D000176 ORTHO05D003511 1.1e-08 63.2 62 48.4
QL11p038845 Quercus lobata HOM05D000176 ORTHO05D000106 1.1e-08 63.2 59 57.6
CARHR037760 Cardamine hirsuta HOM05D000176 ORTHO05D003511 1.4e-08 62.8 59 50.8
QL05p061244 Quercus lobata HOM05D000176 ORTHO05D000106 1.4e-08 62.8 69 43.5
QL10p058474 Quercus lobata HOM05D000176 ORTHO05D000106 1.4e-08 62.8 69 43.5
AL1G54690 Arabidopsis lyrata HOM05D000176 ORTHO05D003511 1.9e-08 62.4 62 46.8
QL02p042411 Quercus lobata HOM05D002707 ORTHO05D002925 2.5e-08 62.0 56 55.4
QL05p083456 Quercus lobata HOM05D000176 ORTHO05D000106 3.2e-08 61.6 68 42.6
QL02p071405 Quercus lobata HOM05D000176 ORTHO05D000106 4.2e-08 61.2 68 42.6
QL08p063032 Quercus lobata HOM05D002302 ORTHO05D002728 4.2e-08 61.2 68 41.2
QL09p020558 Quercus lobata HOM05D000176 ORTHO05D000106 4.2e-08 61.2 68 42.6
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 4.2e-08 61.2 68 42.6
AT1G48120 Arabidopsis thaliana HOM05D000176 ORTHO05D003511 5.5e-08 60.8 62 45.2
Carub.0001s3722 Capsella rubella HOM05D000176 ORTHO05D003511 5.5e-08 60.8 55 50.9
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 5.5e-08 60.8 60 46.7
QL11p007847 Quercus lobata HOM05D002083 ORTHO05D000332 5.5e-08 60.8 69 43.5
QL05p087728 Quercus lobata HOM05D000176 ORTHO05D000106 7.1e-08 60.5 48 62.5
QL08p031423 Quercus lobata HOM05D000176 ORTHO05D009654 9.3e-08 60.1 59 45.8
QL09p003987 Quercus lobata HOM05D000176 ORTHO05D003511 1.2e-07 59.7 59 50.8
Cc03_g15950 Coffea canephora HOM05D000176 ORTHO05D003511 1.6e-07 59.3 55 47.3
Oeu017988.1 Olea europaea HOM05D000176 ORTHO05D000106 2.1e-07 58.9 60 50.0
QL03p000009 Quercus lobata HOM05D000176 ORTHO05D000106 2.1e-07 58.9 60 46.7
QL07p006103 Quercus lobata HOM05D000176 ORTHO05D000106 2.1e-07 58.9 57 49.1
QL93p0073_0666 Quercus lobata HOM05D003637 ORTHO05D004175 2.1e-07 58.9 57 49.1
Rhsim10G0079000 Rhododendron simsii HOM05D000176 ORTHO05D003511 2.1e-07 58.9 61 50.8
MELO3C030021.2 Cucumis melo HOM05D000176 ORTHO05D000106 3.5e-07 58.2 59 45.8
QL02p103239 Quercus lobata HOM05D000176 ORTHO05D000106 3.5e-07 58.2 56 51.8
QL10p063859 Quercus lobata HOM05D000176 ORTHO05D000106 4.6e-07 57.8 61 49.2
Migut.M01636 Erythranthe guttata HOM05D000176 ORTHO05D000106 6.1e-07 57.4 62 48.4
Oeu049412.1 Olea europaea HOM05D000176 ORTHO05D000106 6.1e-07 57.4 62 45.2
Oeu049415.1 Olea europaea HOM05D000176 ORTHO05D000106 6.1e-07 57.4 62 45.2
QL04p015528 Quercus lobata HOM05D000176 ORTHO05D000106 6.1e-07 57.4 61 49.2
QL05p044352 Quercus lobata HOM05D000176 ORTHO05D000106 6.1e-07 57.4 61 49.2
QL05p061710 Quercus lobata HOM05D010675 ORTHO05D014145 6.1e-07 57.4 61 49.2
QL05p088783 Quercus lobata HOM05D000176 ORTHO05D000106 6.1e-07 57.4 61 49.2
QL07p012019 Quercus lobata HOM05D000176 ORTHO05D000106 6.1e-07 57.4 61 49.2
QL08p003348 Quercus lobata HOM05D000176 ORTHO05D000106 6.1e-07 57.4 61 49.2
QL08p007762 Quercus lobata HOM05D000176 ORTHO05D000106 6.1e-07 57.4 61 49.2
QL08p013497 Quercus lobata HOM05D000017 ORTHO05D007253 6.1e-07 57.4 61 49.2
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 7.9e-07 57.0 69 42.0
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 1.0e-06 56.6 60 45.0
QL05p049475 Quercus lobata HOM05D000176 ORTHO05D000106 1.3e-06 56.2 63 46.0
MELO3C034271.2 Cucumis melo HOM05D000176 ORTHO05D009654 1.8e-06 55.8 59 45.8
QL08p006787 Quercus lobata HOM05D000176 ORTHO05D000106 1.8e-06 55.8 61 47.5
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 1.8e-06 55.8 59 44.1
QL10p058009 Quercus lobata HOM05D000176 ORTHO05D000106 1.8e-06 55.8 61 47.5
Sed0014738 Sechium edule HOM05D000176 ORTHO05D000106 1.8e-06 55.8 51 51.0
QL02p062649 Quercus lobata HOM05D000176 ORTHO05D000106 2.3e-06 55.5 61 47.5
QL03p060265 Quercus lobata HOM05D000176 ORTHO05D000106 2.3e-06 55.5 61 47.5
QL10p054240 Quercus lobata HOM05D000176 ORTHO05D000106 2.3e-06 55.5 61 47.5
QL12p036511 Quercus lobata HOM05D000176 ORTHO05D000106 2.3e-06 55.5 61 47.5
SHI45281 Sapria himalayana HOM05D000176 ORTHO05D000106 2.3e-06 55.5 56 46.4
Lj1g0015263 Lotus japonicus HOM05D000176 ORTHO05D000106 3.0e-06 55.1 63 42.9
Cc05_g12610 Coffea canephora HOM05D000176 ORTHO05D000106 3.9e-06 54.7 62 45.2
Sed0015346 Sechium edule HOM05D000176 ORTHO05D000106 3.9e-06 54.7 55 43.6
TWI75G0639 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 3.9e-06 54.7 56 44.6
ClCG11G000230 Citrullus lanatus HOM05D000176 ORTHO05D000106 5.1e-06 54.3 49 53.1
Sed0010925 Sechium edule HOM05D000176 ORTHO05D000106 5.1e-06 54.3 55 49.1


User provided reference genes

Program Settings