Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 2.9e-34 147.9 69 100.0
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 7.3e-30 133.3 69 89.9
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 1.1e-28 129.4 70 87.1
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 5.4e-25 117.1 64 82.8
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 2.1e-24 115.2 61 82.0
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 2.7e-24 114.8 61 85.2
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 1.0e-23 112.8 62 79.0
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 1.0e-23 112.8 69 76.8
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 1.0e-23 112.8 64 82.8
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 1.7e-23 112.1 64 79.7
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 1.7e-23 112.1 64 79.7
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 3.0e-23 111.3 61 80.3
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 3.0e-23 111.3 61 80.3
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 5.1e-23 110.5 64 76.6
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 6.6e-23 110.2 64 79.7
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 6.6e-23 110.2 64 79.7
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 8.6e-23 109.8 64 79.7
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 8.6e-23 109.8 64 75.0
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 1.1e-22 109.4 64 75.0
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 1.1e-22 109.4 61 80.3
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 1.5e-22 109.0 64 75.0
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 3.3e-22 107.8 62 79.0
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 3.3e-22 107.8 62 79.0
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 3.3e-22 107.8 61 80.3
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 4.3e-22 107.5 62 77.4
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 4.3e-22 107.5 62 77.4
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 4.3e-22 107.5 62 77.4
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 4.3e-22 107.5 61 78.7
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 5.6e-22 107.1 62 77.4
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 5.6e-22 107.1 62 77.4
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 5.6e-22 107.1 62 77.4
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 9.6e-22 106.3 61 78.7
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 1.2e-21 105.9 62 77.4
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 1.2e-21 105.9 64 78.1
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 1.2e-21 105.9 61 80.3
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 2.8e-21 104.8 67 73.1
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 3.6e-21 104.4 69 71.0
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 8.1e-21 103.2 58 79.3
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 8.1e-21 103.2 64 75.0
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 1.1e-20 102.8 62 79.0
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 1.1e-20 102.8 60 76.7
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 3.1e-20 101.3 61 77.0
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 6.9e-20 100.1 57 77.2
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 1.2e-19 99.4 58 77.6
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 1.5e-19 99.0 60 73.3
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 2.0e-19 98.6 65 70.8
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 3.4e-19 97.8 64 75.0
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 4.4e-19 97.4 59 76.3
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 9.9e-19 96.3 62 75.8
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 2.9e-18 94.7 58 74.1
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 6.4e-18 93.6 58 74.1
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 8.4e-18 93.2 70 64.3
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 1.9e-17 92.0 60 71.7
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 1.0e-15 86.3 64 60.9
AagrBONN_evm.TU.Sc2ySwM_228.5013 Anthoceros agrestis HOM05D007992 ORTHO05D010086 1.3e-15 85.9 61 60.7
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 1.5e-14 82.4 62 64.5
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 1.9e-14 82.0 59 66.1
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 1.1e-12 76.3 58 63.8
Lalb_Chr13g0304491 Lupinus albus HOM05D007992 ORTHO05D010086 1.4e-12 75.9 62 59.7
CBR_g44919 Chara braunii HOM05D007992 ORTHO05D010086 5.3e-12 73.9 64 51.6
SMO367G0246 Selaginella moellendorffii HOM05D007992 ORTHO05D010086 1.5e-11 72.4 61 49.2
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 2.6e-11 71.6 61 59.0
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 2.6e-11 71.6 61 59.0
MBI09_g08443_MAGBIO Magnolia biondii HOM05D007992 ORTHO05D010086 4.5e-11 70.9 37 78.4
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 9.9e-11 69.7 61 57.4
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 1.3e-10 69.3 61 57.4
Actinidia26161 Actinidia chinensis HOM05D000243 ORTHO05D010086 2.9e-10 68.2 45 68.9
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 2.9e-10 68.2 61 55.7
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 6.4e-10 67.0 61 54.1
CDE02G3423 Ceratophyllum demersum HOM05D007992 ORTHO05D010086 6.0e-08 60.5 67 43.3
unitig_26.g9026 Utricularia gibba HOM05D007992 ORTHO05D010086 1.3e-07 59.3 29 86.2
TPR.G17560 Trifolium pratense HOM05D007992 ORTHO05D010086 2.3e-07 58.5 29 89.7
Sabra03G0005100 Salix brachista HOM05D007992 ORTHO05D010086 3.0e-07 58.2 34 70.6
SGA_v2.0_scaffold272G46362 Striga asiatica HOM05D007992 ORTHO05D010086 5.1e-07 57.4 29 86.2
Migut.B00795 Erythranthe guttata HOM05D007992 ORTHO05D010086 6.7e-07 57.0 29 82.8
Rhsim11G0125500 Rhododendron simsii HOM05D007992 ORTHO05D010086 6.7e-07 57.0 32 71.9
PGSC0003DMG400024927 Solanum tuberosum HOM05D007992 ORTHO05D010086 1.1e-06 56.2 29 82.8
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 1.5e-06 55.8 54 48.1


User provided reference genes

Program Settings