Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C031418.2 Cucumis melo HOM05D000287 ORTHO05D002423 7.5e-36 153.3 76 100.0
MELO3C020318.2 Cucumis melo HOM05D000287 ORTHO05D002423 5.6e-15 84.0 51 82.4
CsaV3_3G017740 Cucumis sativus L. HOM05D000287 ORTHO05D002423 2.8e-14 81.6 51 80.4
Sed0003935 Sechium edule HOM05D000287 ORTHO05D002423 1.4e-10 69.3 51 68.6
ClCG05G014370 Citrullus lanatus HOM05D000287 ORTHO05D002423 4.1e-10 67.8 51 66.7
Eucgr.F00805 Eucalyptus grandis HOM05D000287 ORTHO05D002423 1.3e-08 62.8 51 60.8
Eucgr.F00881 Eucalyptus grandis HOM05D000287 ORTHO05D002423 1.7e-08 62.4 51 58.8
CiPaw.11G188000 Carya illinoinensis HOM05D000287 ORTHO05D002423 5.1e-08 60.8 49 55.1
Sed0017363 Sechium edule HOM05D000287 ORTHO05D002423 1.1e-07 59.7 51 58.8
Glyma.02G290000 Glycine max HOM05D000287 ORTHO05D002423 1.5e-07 59.3 51 58.8
Cfa020362 Carpinus fangiana HOM05D000287 ORTHO05D002423 3.3e-07 58.2 51 51.0
Eucgr.F00785 Eucalyptus grandis HOM05D000287 ORTHO05D002423 3.3e-07 58.2 51 54.9
Eucgr.F00880 Eucalyptus grandis HOM05D000287 ORTHO05D002423 3.3e-07 58.2 51 54.9
Dinv40744 Davidia involucrata HOM05D000287 ORTHO05D002423 4.3e-07 57.8 51 52.9
vmacro09725 Vaccinium macrocarpon HOM05D000287 ORTHO05D002423 4.3e-07 57.8 51 52.9
Actinidia10727 Actinidia chinensis HOM05D000287 ORTHO05D002423 5.6e-07 57.4 51 54.9
Nitab4.5_0011505g0010 Nicotiana tabacum HOM05D000287 ORTHO05D002423 7.3e-07 57.0 51 54.9
TWI39G0593 Tripterygium wilfordii HOM05D000287 ORTHO05D002423 7.3e-07 57.0 51 54.9
Prupe.4G210900 Prunus persica HOM05D000287 ORTHO05D002423 9.6e-07 56.6 52 53.8
Solyc07g064450.4 Solanum lycopersicum HOM05D000287 ORTHO05D002423 9.6e-07 56.6 51 52.9
Sopen07g032650 Solanum pennellii HOM05D000287 ORTHO05D002423 9.6e-07 56.6 51 52.9
PGSC0003DMG400022224 Solanum tuberosum HOM05D000287 ORTHO05D002423 1.2e-06 56.2 51 52.9
CANSAT01G2397 Cannabis sativa HOM05D000287 ORTHO05D002423 1.6e-06 55.8 52 48.1
Haze_09659 Corylus avellana HOM05D000287 ORTHO05D002423 1.6e-06 55.8 51 51.0
Eucgr.F00804 Eucalyptus grandis HOM05D000287 ORTHO05D002423 1.6e-06 55.8 51 56.9
Ciclev10010640m.g Citrus clementina HOM05D000287 ORTHO05D002423 2.1e-06 55.5 51 52.9
Peaxi162Scf00964g00143 Petunia axillaris HOM05D000287 ORTHO05D002423 2.1e-06 55.5 51 52.9
Aqoxy4G01769 Aquilegia oxysepala HOM05D000287 ORTHO05D002423 2.8e-06 55.1 51 51.0
Cpa.g.sc97.24 Carica papaya HOM05D000287 ORTHO05D002423 2.8e-06 55.1 51 51.0
ClCG05G014390 Citrullus lanatus HOM05D000287 ORTHO05D002423 2.8e-06 55.1 52 57.7
RhsimUnG0251400 Rhododendron simsii HOM05D000287 ORTHO05D002423 2.8e-06 55.1 51 51.0
CsaV3_3G022960 Cucumis sativus L. HOM05D000287 ORTHO05D002423 3.6e-06 54.7 52 59.6
Phvul.008G235000 Phaseolus vulgaris HOM05D000287 ORTHO05D002423 3.6e-06 54.7 51 52.9
Cpa.g.sc97.25 Carica papaya HOM05D000287 ORTHO05D002423 4.7e-06 54.3 51 49.0
MELO3C018117.2 Cucumis melo HOM05D000287 ORTHO05D002423 4.7e-06 54.3 52 57.7
MD03G1183000 Malus domestica HOM05D000287 ORTHO05D002423 4.7e-06 54.3 52 51.9
MD03G1205100 Malus domestica HOM05D000287 ORTHO05D002423 4.7e-06 54.3 52 51.9
PGR031G2665 Punica granatum HOM05D000287 ORTHO05D002423 4.7e-06 54.3 51 52.9
COL.COLO4_09649 Corchorus olitorius HOM05D000287 ORTHO05D002423 6.2e-06 53.9 51 52.9
Nitab4.5_0001913g0090 Nicotiana tabacum HOM05D000287 ORTHO05D002423 6.2e-06 53.9 51 54.9
MD03G1204900 Malus domestica HOM05D000287 ORTHO05D002423 8.1e-06 53.5 51 52.9
Prupe.4G211000 Prunus persica HOM05D000287 ORTHO05D002423 8.1e-06 53.5 51 52.9


User provided reference genes

Program Settings