Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C031327.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.0e-290 1001.1 498 100.0
MELO3C004331.2 Cucumis melo HOM05D007588 ORTHO05D001339 8.4e-261 903.3 470 94.9
MELO3C004264.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.4e-186 656.8 498 68.7
MELO3C023377.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.2e-135 486.1 528 49.6
MELO3C006457.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.2e-110 404.4 418 47.6
MELO3C014073.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.0e-104 384.8 456 44.1
MELO3C005552.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.6e-92 343.6 476 37.4
CsaV3_5G024960 Cucumis sativus L. HOM05D007588 ORTHO05D001339 3.7e-91 339.7 295 54.2
Sed0005938 Sechium edule HOM05D007588 ORTHO05D001339 1.9e-87 327.4 436 39.2
Sed0017106 Sechium edule HOM05D007588 ORTHO05D001339 9.4e-87 325.1 415 36.4
ClCG06G018450 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.8e-82 310.8 385 41.0
Sed0011849 Sechium edule HOM05D007588 ORTHO05D001339 7.0e-82 308.9 392 37.5
MELO3C023616.2 Cucumis melo HOM05D007588 ORTHO05D001339 9.5e-79 298.5 450 36.9
MELO3C025478.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.4e-75 285.8 192 71.9
MELO3C021089.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.8e-74 284.3 411 37.7
Sed0025559 Sechium edule HOM05D007588 ORTHO05D001339 6.6e-72 275.8 409 36.7
MELO3C000403.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.3e-71 273.5 299 45.2
MELO3C000406.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.6e-70 271.2 296 44.9
Sed0008707 Sechium edule HOM05D007588 ORTHO05D001339 5.8e-68 262.7 416 34.1
Sed0018778 Sechium edule HOM05D007588 ORTHO05D001339 9.8e-68 261.9 334 40.1
Sed0001869 Sechium edule HOM05D007588 ORTHO05D001339 1.4e-66 258.1 407 34.2
MELO3C004043.2 Cucumis melo HOM05D007588 ORTHO05D001339 7.3e-63 245.7 304 42.4
MELO3C027442.2 Cucumis melo HOM05D007588 ORTHO05D001339 9.5e-63 245.4 281 47.0
MELO3C014251.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.2e-60 238.4 215 51.6
MELO3C009067.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.9e-59 233.8 308 39.6
Sed0000206 Sechium edule HOM05D007588 ORTHO05D001339 6.0e-57 226.1 402 34.6
Sed0016803 Sechium edule HOM05D007588 ORTHO05D001339 1.5e-55 221.5 431 32.5
Sed0005891 Sechium edule HOM05D007588 ORTHO05D001339 9.5e-55 218.8 306 39.5
MELO3C035530.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.2e-54 216.1 361 35.5
MELO3C026771.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.8e-53 214.5 361 35.5
MELO3C012990.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.1e-53 213.8 176 51.1
Sed0002972 Sechium edule HOM05D007588 ORTHO05D001339 1.7e-51 208.0 308 34.1
Sed0024011 Sechium edule HOM05D007588 ORTHO05D001339 1.2e-49 201.8 186 43.5
ClCG03G008310 Citrullus lanatus HOM05D007588 ORTHO05D001339 2.7e-49 200.7 203 44.8
Sed0008385 Sechium edule HOM05D007588 ORTHO05D001339 1.1e-45 188.7 276 38.0
CsaV3_6G033820 Cucumis sativus L. HOM05D007588 ORTHO05D001339 3.1e-45 187.2 150 49.3
ClCG10G001990 Citrullus lanatus HOM05D007588 ORTHO05D001339 6.9e-45 186.0 344 33.1
MELO3C029797.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.4e-43 179.5 149 52.3
MELO3C024617.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.2e-42 176.8 312 34.0
Sed0015279 Sechium edule HOM05D007588 ORTHO05D001339 4.2e-42 176.8 444 25.9
Sed0017408 Sechium edule HOM05D007588 ORTHO05D001339 7.1e-42 176.0 258 35.3
ClCG10G006620 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.6e-41 174.9 285 36.1
MELO3C003179.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.1e-41 174.5 243 39.5
Sed0007767 Sechium edule HOM05D007588 ORTHO05D001339 1.9e-39 167.9 431 29.2
MELO3C004802.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.6e-39 166.4 143 47.6
Sed0024303 Sechium edule HOM05D007588 ORTHO05D001339 1.8e-37 161.4 337 30.3
MELO3C032919.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.5e-36 156.8 131 51.1
Prupe.4G281000 Prunus persica HOM05D002180 ORTHO05D001339 2.3e-32 144.4 356 27.2
Sed0000745 Sechium edule HOM05D007588 ORTHO05D001339 2.3e-32 144.4 216 34.7
ClCG08G006830 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.3e-30 138.7 181 40.3
Sed0012823 Sechium edule HOM05D007588 ORTHO05D001339 2.8e-30 137.5 150 38.0
ClCG05G011080 Citrullus lanatus HOM05D007588 ORTHO05D001339 4.8e-30 136.7 275 33.8
MELO3C003063.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.2e-30 136.3 130 46.2
ClCG08G006820 Citrullus lanatus HOM05D007588 ORTHO05D001339 6.9e-29 132.9 158 40.5
Lj5A834G28 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-28 131.7 422 25.8
Lj1A354T50 Lonicera japonica HOM05D002180 ORTHO05D001339 4.9e-27 126.7 367 24.0
Lj6C448T6 Lonicera japonica HOM05D002180 ORTHO05D001339 6.4e-27 126.3 366 24.0
Lj3C303G1 Lonicera japonica HOM05D002180 ORTHO05D001339 7.1e-26 122.9 466 25.3
Sed0010098 Sechium edule HOM05D007588 ORTHO05D001339 7.1e-26 122.9 118 46.6
Lj6A524T43 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-25 120.2 356 23.9
Lj9C659T14 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-25 120.2 462 26.0
Lj6C103T11 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-24 119.0 353 25.5
Lj3C720T16 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-24 118.6 405 23.2
Lj7C629T7 Lonicera japonica HOM05D002180 ORTHO05D001339 2.3e-24 117.9 329 24.0
ClCG00G004030 Citrullus lanatus HOM05D009184 ORTHO05D001339 2.5e-23 114.4 339 24.5
Lj3C276T1 Lonicera japonica HOM05D009066 ORTHO05D001339 4.3e-23 113.6 356 24.7
Lj7A477T78 Lonicera japonica HOM05D002180 ORTHO05D001339 7.4e-23 112.8 362 25.7
ClCG00G005620 Citrullus lanatus HOM05D014232 ORTHO05D001339 1.3e-22 112.1 377 26.0
ClCG06G011820 Citrullus lanatus HOM05D014232 ORTHO05D001339 1.3e-22 112.1 377 26.0
Sed0014331 Sechium edule HOM05D007588 ORTHO05D001339 1.3e-22 112.1 120 39.2
Lj1C27T4 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-22 111.7 163 32.5
Lj2A800T17 Lonicera japonica HOM05D002180 ORTHO05D001339 2.8e-22 110.9 300 26.0
ClCG06G009500 Citrullus lanatus HOM05D009184 ORTHO05D001339 6.2e-22 109.8 257 27.2
CsaV3_1G009110 Cucumis sativus L. HOM05D007588 ORTHO05D001339 1.4e-21 108.6 82 61.0
Sed0010813 Sechium edule HOM05D007588 ORTHO05D001339 1.4e-21 108.6 123 42.3
Lju41A59G27 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-21 107.8 354 24.6
MELO3C029873.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.1e-21 107.5 58 81.0
Lj6C461T8 Lonicera japonica HOM05D002180 ORTHO05D001339 3.1e-21 107.5 401 23.2
Lju1295C2G0 Lonicera japonica HOM05D002180 ORTHO05D001339 3.1e-21 107.5 362 22.1
Lj1A337T22 Lonicera japonica HOM05D000561 ORTHO05D001339 9.0e-21 105.9 163 31.3
Lj1C294T1 Lonicera japonica HOM05D002180 ORTHO05D001339 9.0e-21 105.9 368 23.6
Lju432C3G2 Lonicera japonica HOM05D002180 ORTHO05D001339 9.0e-21 105.9 163 31.3
Lj2C907T4 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-20 105.5 163 31.3
Lj1P545T41 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-20 105.1 163 31.3
Lj7C704T20 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-20 105.1 362 24.0
Lju432C4T3 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-20 104.8 202 30.7
ClCG03G011770 Citrullus lanatus HOM05D000002 ORTHO05D015610 2.6e-20 104.4 308 23.4
ClCG05G011290 Citrullus lanatus HOM05D000003 ORTHO05D000004 2.6e-20 104.4 361 24.7
Lj3C1002T15 Lonicera japonica HOM05D002180 ORTHO05D001339 2.6e-20 104.4 401 22.7
Sed0013444 Sechium edule HOM05D007588 ORTHO05D001339 2.6e-20 104.4 252 28.6
ClCG05G010700 Citrullus lanatus HOM05D009184 ORTHO05D001339 3.4e-20 104.0 174 29.9
MELO3C029351.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.5e-20 103.6 108 41.7
MELO3C032938.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.8e-20 103.2 110 44.5
Lj1C335T7 Lonicera japonica HOM05D009066 ORTHO05D001339 5.8e-20 103.2 357 24.9
Lj1C6T4 Lonicera japonica HOM05D009066 ORTHO05D001339 1.0e-19 102.4 180 30.6
Lj6P572T28 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-18 99.0 171 31.0
ClCG05G012190 Citrullus lanatus HOM05D007588 ORTHO05D001339 3.2e-18 97.4 94 40.4
CSS0015024 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 5.5e-18 96.7 338 24.9
Lj3C63T0 Lonicera japonica HOM05D009066 ORTHO05D001339 9.3e-18 95.9 248 27.4
Lj6P216T13 Lonicera japonica HOM05D002180 ORTHO05D001339 9.3e-18 95.9 303 24.8
Sed0008115 Sechium edule HOM05D007588 ORTHO05D001339 1.2e-17 95.5 124 36.3
Sed0000711 Sechium edule HOM05D048706 ORTHO05D001339 1.6e-17 95.1 177 34.5
ClCG03G010370 Citrullus lanatus HOM05D009184 ORTHO05D001339 2.1e-17 94.7 321 25.2
ClCG07G010540 Citrullus lanatus HOM05D007588 ORTHO05D001339 6.0e-17 93.2 140 37.9
MELO3C020247.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.0e-17 93.2 106 39.6
MELO3C028681.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.0e-17 93.2 135 34.8
Lj4C429T0 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-16 92.4 191 28.3
Lj1A1140T45 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-16 92.0 371 26.1
CSS0037907 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 2.3e-16 91.3 161 29.8
MELO3C033167.2 Cucumis melo HOM05D000877 ORTHO05D001339 2.3e-16 91.3 83 43.4
ClCG03G011420 Citrullus lanatus HOM05D009184 ORTHO05D001339 3.9e-16 90.5 332 24.7
ClCG06G009830 Citrullus lanatus HOM05D009184 ORTHO05D015610 3.9e-16 90.5 148 30.4
Lj5C655G9 Lonicera japonica HOM05D002180 ORTHO05D001339 5.1e-16 90.1 339 22.1
Lj8P504T15 Lonicera japonica HOM05D002180 ORTHO05D001339 5.1e-16 90.1 134 32.8
Sed0026738 Sechium edule HOM05D007588 ORTHO05D001339 6.7e-16 89.7 116 33.6
ClCG03G017440 Citrullus lanatus HOM05D007588 ORTHO05D001339 4.3e-15 87.0 168 33.3
MELO3C029369.2 Cucumis melo HOM05D007588 ORTHO05D001339 9.6e-15 85.9 129 34.9
Lj5P198T48 Lonicera japonica HOM05D002180 ORTHO05D001339 2.1e-14 84.7 124 31.5
Sed0010644 Sechium edule HOM05D007588 ORTHO05D001339 2.1e-14 84.7 88 47.7
Sed0021777 Sechium edule HOM05D007588 ORTHO05D001339 2.8e-14 84.3 99 39.4
CsaV3_6G041450 Cucumis sativus L. HOM05D007588 ORTHO05D001339 3.7e-14 84.0 103 42.7
Lj6P507T14 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-14 83.6 141 27.7
CANSAT21G1376 Cannabis sativa HOM05D002180 ORTHO05D001339 8.2e-14 82.8 359 20.1
MELO3C004097.2 Cucumis melo HOM05D007588 ORTHO05D001339 8.2e-14 82.8 189 32.3
Sed0014201 Sechium edule HOM05D007588 ORTHO05D001339 8.2e-14 82.8 113 34.5
ClCG07G006510 Citrullus lanatus HOM05D009184 ORTHO05D000001 1.4e-13 82.0 137 30.7
ClCG07G007120 Citrullus lanatus HOM05D007588 ORTHO05D001339 4.1e-13 80.5 69 58.0
ClCG10G007440 Citrullus lanatus HOM05D000003 ORTHO05D000004 5.3e-13 80.1 146 27.4
CSS0038789 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 2.6e-12 77.8 227 26.9
Lj3C921G6 Lonicera japonica HOM05D002180 ORTHO05D001339 3.4e-12 77.4 408 21.1
ClCG01G016460 Citrullus lanatus HOM05D009184 ORTHO05D001339 4.5e-12 77.0 312 22.4
ClCG06G010890 Citrullus lanatus HOM05D014232 ORTHO05D001339 4.5e-12 77.0 186 30.6
Lj8A507T31 Lonicera japonica HOM05D002180 ORTHO05D001339 4.5e-12 77.0 87 36.8
CSS0049109 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 1.3e-11 75.5 300 23.3
MELO3C026648.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.2e-11 74.7 109 40.4
Lj5C563G0 Lonicera japonica HOM05D002180 ORTHO05D001339 2.9e-11 74.3 319 21.0
Lj7A757T38 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-10 72.4 92 30.4
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.4e-10 72.0 159 29.6
MELO3C004723.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.4e-10 72.0 83 38.6
Lj5C672T6 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-10 72.0 131 28.2
Lj7A706G42 Lonicera japonica HOM05D001880 ORTHO05D001339 1.9e-10 71.6 98 31.6
GSVIVG01002904001 Vitis vinifera HOM05D001447 ORTHO05D006370 1.9e-10 71.6 346 22.5
Lj3P654T27 Lonicera japonica HOM05D002180 ORTHO05D001339 3.2e-10 70.9 83 34.9
Lj3C635T12 Lonicera japonica HOM05D002180 ORTHO05D001339 5.5e-10 70.1 251 23.5
Nn2g13826 Nelumbo nucifera HOM05D011113 ORTHO05D001339 5.5e-10 70.1 172 29.1
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 1.6e-09 68.6 275 24.4
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.6e-09 68.6 275 24.4
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.6e-09 68.6 275 24.4
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.6e-09 68.6 275 24.4
ClCG08G003110 Citrullus lanatus HOM05D007588 ORTHO05D001339 2.1e-09 68.2 77 35.1
Lj2C9T15 Lonicera japonica HOM05D002180 ORTHO05D001339 2.1e-09 68.2 251 23.1
Lj7C641G7 Lonicera japonica HOM05D002180 ORTHO05D001339 2.1e-09 68.2 99 34.3
CsaV3_2G008840 Cucumis sativus L. HOM05D007588 ORTHO05D001339 2.7e-09 67.8 62 46.8
Sed0000388 Sechium edule HOM05D007588 ORTHO05D001339 3.6e-09 67.4 205 26.8
Lj8P504T20 Lonicera japonica HOM05D009066 ORTHO05D001339 7.9e-09 66.2 109 28.4
Nn4g26617 Nelumbo nucifera HOM05D011113 ORTHO05D001339 1.3e-08 65.5 120 30.8
Sed0000544 Sechium edule HOM05D007588 ORTHO05D001339 1.3e-08 65.5 87 35.6
Lj5P610T17 Lonicera japonica HOM05D002180 ORTHO05D001339 1.8e-08 65.1 119 26.1
Lj2C14T15 Lonicera japonica HOM05D002180 ORTHO05D001339 2.3e-08 64.7 179 25.1
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 6.7e-08 63.2 321 21.8
SHI23486 Sapria himalayana HOM05D006502 ORTHO05D007704 6.7e-08 63.2 322 22.4
Lj6C285T4 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-07 62.4 528 19.1
MELO3C012892.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.5e-07 61.2 114 29.8
Lj4C42T8 Lonicera japonica HOM05D002180 ORTHO05D001339 2.5e-07 61.2 83 33.7
Solyc09g005450.1 Solanum lycopersicum HOM05D008032 ORTHO05D006370 2.5e-07 61.2 105 31.4
GSVIVG01020820001 Vitis vinifera HOM05D001610 ORTHO05D006370 2.5e-07 61.2 98 28.6
GSVIVG01031689001 Vitis vinifera HOM05D008877 ORTHO05D007704 2.5e-07 61.2 110 29.1
Solyc03g033830.2 Solanum lycopersicum HOM05D033312 ORTHO05D006370 5.7e-07 60.1 104 36.5
MELO3C032040.2 Cucumis melo HOM05D007588 ORTHO05D001339 7.4e-07 59.7 177 29.4
CsaV3_2G008180 Cucumis sativus L. HOM05D007588 ORTHO05D001339 7.4e-07 59.7 78 37.2
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 9.7e-07 59.3 163 27.0
Sopen03g006580 Solanum pennellii HOM05D033312 ORTHO05D006370 1.3e-06 58.9 93 37.6
GSVIVG01034263001 Vitis vinifera HOM05D008877 ORTHO05D007704 1.3e-06 58.9 100 30.0
Lj7C641T6 Lonicera japonica HOM05D052045 ORTHO05D001339 2.2e-06 58.2 225 22.7
CSS0042161 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 2.8e-06 57.8 120 25.8
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 2.8e-06 57.8 110 29.1
Lj2C8G2 Lonicera japonica HOM05D002180 ORTHO05D001339 3.7e-06 57.4 182 25.8
Lj6P285T23 Lonicera japonica HOM05D002180 ORTHO05D001339 3.7e-06 57.4 77 33.8
ClCG08G003120 Citrullus lanatus HOM05D007588 ORTHO05D001339 4.8e-06 57.0 74 31.1
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 4.8e-06 57.0 73 34.2
GSVIVG01013566001 Vitis vinifera HOM05D001792 ORTHO05D001821 4.8e-06 57.0 100 29.0
Nn1g06295 Nelumbo nucifera HOM05D011113 ORTHO05D001339 8.2e-06 56.2 67 31.3
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 8.2e-06 56.2 76 32.9


User provided reference genes

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