Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C031309.2 Cucumis melo HOM05D008339 ORTHO05D009712 3.1e-50 201.4 99 100.0
MELO3C031525.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.5e-47 192.6 99 96.0
MELO3C031523.2 Cucumis melo HOM05D008339 ORTHO05D009712 5.5e-47 190.7 99 94.9
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 1.7e-32 142.5 97 71.1
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 8.0e-30 133.7 94 69.1
MELO3C004156.2 Cucumis melo HOM05D008339 ORTHO05D009712 6.8e-29 130.6 98 67.3
MELO3C004168.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.5e-28 129.4 98 66.3
MELO3C004166.2 Cucumis melo HOM05D008339 ORTHO05D009712 3.4e-28 128.3 98 66.3
Sed0011112 Sechium edule HOM05D008339 ORTHO05D009712 1.1e-26 123.2 92 65.2
MELO3C004157.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.8e-26 122.5 95 64.2
MELO3C031307.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.5e-23 112.1 98 58.2
MELO3C031306.2 Cucumis melo HOM05D008339 ORTHO05D009712 3.6e-22 108.2 98 57.1
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 4.7e-22 107.8 97 55.7
CsaV3_2G007240 Cucumis sativus L. HOM05D008339 ORTHO05D007109 6.2e-22 107.5 98 57.1
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 6.2e-22 107.5 97 54.6
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 1.8e-21 105.9 97 53.6
Sabra11G0113000 Salix brachista HOM05D008339 ORTHO05D009712 1.8e-21 105.9 97 53.6
Gohir.D11G276100 Gossypium hirsutum HOM05D008339 ORTHO05D009712 8.9e-21 103.6 97 53.6
Gorai.007G298200 Gossypium raimondii HOM05D008339 ORTHO05D009712 8.9e-21 103.6 97 53.6
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 1.7e-19 99.4 94 54.3
MELO3C031308.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.4e-18 96.3 66 69.7
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 7.0e-18 94.0 97 49.5
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 9.2e-18 93.6 92 52.2
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 9.2e-18 93.6 97 48.5
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 6.0e-17 90.9 93 48.4
RcHm_v2.0_Chr3g0457691 Rosa chinensis HOM05D008339 ORTHO05D009712 2.3e-16 89.0 93 47.3
FvH4_6g07980 Fragaria vesca HOM05D008339 ORTHO05D009712 3.0e-16 88.6 93 41.9
FAN14G5780 Fragaria x ananassa HOM05D008339 ORTHO05D009712 3.0e-16 88.6 93 41.9
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 3.0e-16 88.6 97 46.4
FAN02G4119 Fragaria x ananassa HOM05D008339 ORTHO05D009712 1.9e-15 85.9 94 46.8
FvH4_6g08020 Fragaria vesca HOM05D008339 ORTHO05D009712 3.3e-15 85.1 94 45.7
FAN05G1492 Fragaria x ananassa HOM05D008339 ORTHO05D009712 3.3e-15 85.1 94 45.7
FAN14G1454 Fragaria x ananassa HOM05D008339 ORTHO05D009712 3.3e-15 85.1 94 45.7
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 1.2e-14 83.2 94 47.9
Prupe.6G309200 Prunus persica HOM05D008339 ORTHO05D009712 1.6e-14 82.8 98 46.9
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 1.6e-14 82.8 91 44.0
TWI12G1182 Tripterygium wilfordii HOM05D008339 ORTHO05D009712 6.2e-14 80.9 97 40.2
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 4.0e-13 78.2 94 45.7
Prupe.1G205300 Prunus persica HOM05D008339 ORTHO05D009712 4.0e-13 78.2 98 44.9
MD12G1203500 Malus domestica HOM05D008339 ORTHO05D009712 2.6e-12 75.5 94 43.6
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 3.4e-12 75.1 97 44.3
PGR004G1038 Punica granatum HOM05D008339 ORTHO05D009712 5.8e-12 74.3 93 40.9
Ah.06g196240 Amaranthus hybridus HOM05D008339 ORTHO05D009712 7.5e-12 73.9 79 51.9
PGR031G2810 Punica granatum HOM05D008339 ORTHO05D009712 2.2e-11 72.4 93 44.1
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 6.4e-11 70.9 94 43.6
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 2.4e-10 68.9 97 36.1
CANSAT54G1683 Cannabis sativa HOM05D008339 ORTHO05D009712 2.4e-10 68.9 97 36.1
AUR62000433 Chenopodium quinoa HOM05D000060 ORTHO05D004147 3.2e-10 68.6 72 50.0
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 1.2e-09 66.6 93 40.9
TAR362G0027 Trochodendron aralioides HOM05D008339 ORTHO05D009712 1.6e-09 66.2 93 36.6
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 3.5e-09 65.1 97 35.1
PGR031G3403 Punica granatum HOM05D008339 ORTHO05D009712 3.3e-07 58.5 92 34.8


User provided reference genes

Program Settings