Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C031307.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.2e-73 278.9 141 100.0
MELO3C031306.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.9e-56 222.6 141 80.9
CsaV3_2G007240 Cucumis sativus L. HOM05D008339 ORTHO05D007109 6.7e-54 214.2 139 77.0
MELO3C004156.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.4e-51 205.7 141 73.0
MELO3C004166.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.4e-51 205.7 141 73.8
MELO3C004168.2 Cucumis melo HOM05D008339 ORTHO05D009712 5.3e-51 204.5 141 72.3
MELO3C004157.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.9e-45 186.0 141 67.4
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 1.3e-44 183.3 139 66.9
MELO3C031525.2 Cucumis melo HOM05D008339 ORTHO05D009712 6.5e-41 171.0 140 62.1
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 6.5e-41 171.0 140 61.4
MELO3C031308.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.5e-29 132.5 108 60.2
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 1.6e-28 129.8 139 46.0
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 4.8e-28 128.3 139 46.8
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 1.4e-27 126.7 139 46.0
Sed0011112 Sechium edule HOM05D008339 ORTHO05D009712 9.1e-27 124.0 139 48.2
Prupe.6G309200 Prunus persica HOM05D008339 ORTHO05D009712 5.9e-26 121.3 140 47.1
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 1.7e-25 119.8 139 43.9
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 8.5e-25 117.5 135 45.9
Gorai.007G298200 Gossypium raimondii HOM05D008339 ORTHO05D009712 3.2e-24 115.5 130 46.9
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 4.2e-24 115.2 139 43.9
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 7.2e-24 114.4 139 42.4
MELO3C031523.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.6e-23 113.2 98 59.2
Gohir.D11G276100 Gossypium hirsutum HOM05D008339 ORTHO05D009712 6.1e-23 111.3 130 45.4
MELO3C031309.2 Cucumis melo HOM05D008339 ORTHO05D009712 7.9e-23 110.9 98 58.2
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 1.4e-22 110.2 135 43.0
TWI12G1182 Tripterygium wilfordii HOM05D008339 ORTHO05D009712 2.3e-22 109.4 139 39.6
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 1.1e-21 107.1 135 40.7
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 1.7e-20 103.2 139 41.0
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 1.1e-19 100.5 143 39.2
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 4.1e-19 98.6 139 38.8
PGR031G2810 Punica granatum HOM05D008339 ORTHO05D009712 4.1e-19 98.6 135 40.0
PGR004G1038 Punica granatum HOM05D008339 ORTHO05D009712 9.1e-19 97.4 135 39.3
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 1.5e-18 96.7 136 37.5
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 2.0e-18 96.3 134 40.3
MD12G1203500 Malus domestica HOM05D008339 ORTHO05D009712 1.0e-17 94.0 132 37.9
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 2.9e-17 92.4 138 39.1
Sabra11G0113000 Salix brachista HOM05D008339 ORTHO05D009712 5.0e-17 91.7 103 47.6
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 8.5e-17 90.9 138 37.7
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 2.5e-16 89.4 139 34.5
CANSAT54G1683 Cannabis sativa HOM05D008339 ORTHO05D009712 9.4e-16 87.4 139 34.5
AUR62000433 Chenopodium quinoa HOM05D000060 ORTHO05D004147 7.9e-15 84.3 138 34.1
FvH4_6g08020 Fragaria vesca HOM05D008339 ORTHO05D009712 7.9e-15 84.3 133 33.8
FAN05G1492 Fragaria x ananassa HOM05D008339 ORTHO05D009712 7.9e-15 84.3 133 33.1
FAN14G1454 Fragaria x ananassa HOM05D008339 ORTHO05D009712 7.9e-15 84.3 133 33.8
FvH4_6g07980 Fragaria vesca HOM05D008339 ORTHO05D009712 1.8e-14 83.2 132 31.1
FAN14G5780 Fragaria x ananassa HOM05D008339 ORTHO05D009712 1.8e-14 83.2 132 31.1
FAN02G4119 Fragaria x ananassa HOM05D008339 ORTHO05D009712 3.0e-14 82.4 133 33.1
Prupe.1G205300 Prunus persica HOM05D008339 ORTHO05D009712 8.8e-14 80.9 110 42.7
PGR031G3403 Punica granatum HOM05D008339 ORTHO05D009712 2.8e-12 75.9 135 30.4
MELO3C004164.2 Cucumis melo HOM05D008339 ORTHO05D009712 8.2e-12 74.3 135 37.8
Oeu043429.1 Olea europaea HOM05D009933 ORTHO05D012084 2.4e-11 72.8 137 32.1
Ah.06g196240 Amaranthus hybridus HOM05D008339 ORTHO05D009712 1.2e-10 70.5 142 31.7
Sed0015156 Sechium edule HOM05D011459 ORTHO05D013640 3.5e-10 68.9 133 35.3
CARHR178520 Cardamine hirsuta HOM05D013394 ORTHO05D009712 4.5e-10 68.6 142 32.4
CARHR178500 Cardamine hirsuta HOM05D013394 ORTHO05D009712 1.3e-09 67.0 138 29.7
Oeu043379.1 Olea europaea HOM05D009933 ORTHO05D012084 2.9e-09 65.9 137 29.9
AT1G09360 Arabidopsis thaliana HOM05D013394 ORTHO05D009712 3.2e-08 62.4 142 29.6
Migut.G00780 Erythranthe guttata HOM05D009933 ORTHO05D012084 9.4e-08 60.8 135 28.9
Sp1g07970 Schrenkiella parvula HOM05D013394 ORTHO05D009712 9.4e-08 60.8 135 28.1
Cfa004856 Carpinus fangiana HOM05D012615 ORTHO05D010044 4.7e-07 58.5 124 25.8
Carub.0001s0871 Capsella rubella HOM05D009911 ORTHO05D009712 6.1e-07 58.2 127 28.3
Haze_04054 Corylus avellana HOM05D008339 ORTHO05D009712 8.0e-07 57.8 135 29.6
Thhalv10009592m.g Eutrema salsugineum HOM05D013394 ORTHO05D009712 1.4e-06 57.0 139 29.5
Sed0004364 Sechium edule HOM05D011459 ORTHO05D013640 1.8e-06 56.6 137 29.2
TAR362G0352 Trochodendron aralioides HOM05D008191 ORTHO05D010044 1.8e-06 56.6 124 25.8
MBI18_g04557_MAGBIO Magnolia biondii HOM05D008403 ORTHO05D010317 4.0e-06 55.5 138 25.4
Rhsim03G0038400 Rhododendron simsii HOM05D001578 ORTHO05D001207 6.7e-06 54.7 141 28.4
Rhsim03G0038700 Rhododendron simsii HOM05D001578 ORTHO05D001207 8.8e-06 54.3 141 27.0


User provided reference genes

Program Settings