Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C031306.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.0e-74 282.3 141 100.0
CsaV3_2G007240 Cucumis sativus L. HOM05D008339 ORTHO05D007109 1.1e-64 250.0 140 86.4
MELO3C031307.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.9e-56 222.6 141 80.9
MELO3C004156.2 Cucumis melo HOM05D008339 ORTHO05D009712 6.0e-55 217.6 141 78.7
MELO3C004166.2 Cucumis melo HOM05D008339 ORTHO05D009712 6.0e-55 217.6 141 79.4
MELO3C004168.2 Cucumis melo HOM05D008339 ORTHO05D009712 3.9e-54 214.9 141 77.3
MELO3C004157.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.7e-47 192.2 138 72.5
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 4.8e-44 181.4 139 66.9
MELO3C031525.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.2e-41 172.6 140 62.9
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 6.0e-39 164.5 139 60.4
MELO3C031308.2 Cucumis melo HOM05D008339 ORTHO05D009712 6.1e-31 137.9 115 60.9
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 1.6e-28 129.8 139 47.5
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 2.2e-28 129.4 139 46.8
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 4.8e-28 128.3 139 46.8
Sed0011112 Sechium edule HOM05D008339 ORTHO05D009712 1.8e-27 126.3 139 48.9
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 3.4e-26 122.1 139 45.3
Prupe.6G309200 Prunus persica HOM05D008339 ORTHO05D009712 1.3e-25 120.2 140 48.6
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 9.4e-24 114.0 140 43.6
Gorai.007G298200 Gossypium raimondii HOM05D008339 ORTHO05D009712 6.1e-23 111.3 131 45.0
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 1.0e-22 110.5 140 45.0
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 1.0e-22 110.5 135 46.7
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 2.3e-22 109.4 135 42.2
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 8.8e-22 107.5 135 43.0
Gohir.D11G276100 Gossypium hirsutum HOM05D008339 ORTHO05D009712 1.1e-21 107.1 131 43.5
MELO3C031523.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.5e-21 106.7 97 56.7
MELO3C031309.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.6e-21 105.9 98 57.1
TWI12G1182 Tripterygium wilfordii HOM05D008339 ORTHO05D009712 2.6e-21 105.9 139 39.6
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 4.4e-21 105.1 140 42.1
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 8.2e-20 100.9 143 38.5
PGR004G1038 Punica granatum HOM05D008339 ORTHO05D009712 2.4e-19 99.4 135 40.7
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 4.1e-19 98.6 144 39.6
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 1.2e-18 97.1 141 39.0
MD12G1203500 Malus domestica HOM05D008339 ORTHO05D009712 1.5e-18 96.7 132 40.2
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 2.0e-18 96.3 141 39.7
PGR031G2810 Punica granatum HOM05D008339 ORTHO05D009712 3.4e-18 95.5 135 38.5
Sabra11G0113000 Salix brachista HOM05D008339 ORTHO05D009712 1.7e-17 93.2 105 47.6
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 2.2e-17 92.8 134 41.0
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 1.4e-16 90.1 139 36.0
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 1.9e-16 89.7 136 36.0
CANSAT54G1683 Cannabis sativa HOM05D008339 ORTHO05D009712 5.5e-16 88.2 139 36.0
AUR62000433 Chenopodium quinoa HOM05D000060 ORTHO05D004147 2.1e-15 86.3 138 35.5
RcHm_v2.0_Chr3g0457691 Rosa chinensis HOM05D008339 ORTHO05D009712 6.1e-15 84.7 138 34.1
FvH4_6g08020 Fragaria vesca HOM05D008339 ORTHO05D009712 8.8e-14 80.9 134 34.3
FAN05G1492 Fragaria x ananassa HOM05D008339 ORTHO05D009712 8.8e-14 80.9 134 34.3
FAN14G1454 Fragaria x ananassa HOM05D008339 ORTHO05D009712 8.8e-14 80.9 134 34.3
FAN02G4119 Fragaria x ananassa HOM05D008339 ORTHO05D009712 1.1e-13 80.5 134 34.3
Prupe.1G205300 Prunus persica HOM05D008339 ORTHO05D009712 3.3e-13 79.0 98 48.0
FvH4_6g07980 Fragaria vesca HOM05D008339 ORTHO05D009712 4.4e-13 78.6 132 31.1
FAN14G5780 Fragaria x ananassa HOM05D008339 ORTHO05D009712 4.4e-13 78.6 132 31.1
Ah.06g196240 Amaranthus hybridus HOM05D008339 ORTHO05D009712 7.4e-13 77.8 142 35.2
PGR031G3403 Punica granatum HOM05D008339 ORTHO05D009712 7.4e-13 77.8 137 32.1
Sed0015156 Sechium edule HOM05D011459 ORTHO05D013640 2.8e-12 75.9 134 37.3
MELO3C004164.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.4e-11 73.6 135 37.0
Migut.G00780 Erythranthe guttata HOM05D009933 ORTHO05D012084 5.9e-10 68.2 135 31.1
Oeu043429.1 Olea europaea HOM05D009933 ORTHO05D012084 1.3e-09 67.0 137 28.5
C05p07380 Brassica napus HOM05D009911 ORTHO05D009712 2.9e-09 65.9 136 28.7
AL1G19880 Arabidopsis lyrata HOM05D009911 ORTHO05D009712 5.0e-09 65.1 136 28.7
Haze_04054 Corylus avellana HOM05D008339 ORTHO05D009712 5.0e-09 65.1 137 32.8
AT1G09360 Arabidopsis thaliana HOM05D013394 ORTHO05D009712 6.5e-09 64.7 138 31.2
CARHR178500 Cardamine hirsuta HOM05D013394 ORTHO05D009712 8.5e-09 64.3 138 29.7
CARHR178520 Cardamine hirsuta HOM05D013394 ORTHO05D009712 2.5e-08 62.8 138 31.2
Thhalv10009653m.g Eutrema salsugineum HOM05D009911 ORTHO05D009712 3.2e-08 62.4 136 28.7
Eucgr.E00366 Eucalyptus grandis HOM05D008339 ORTHO05D009712 4.2e-08 62.0 139 28.1
Sp1g07970 Schrenkiella parvula HOM05D013394 ORTHO05D009712 1.2e-07 60.5 135 28.9
BraA06t23824Z Brassica rapa HOM05D009911 ORTHO05D009712 1.6e-07 60.1 136 26.5
A06p06110 Brassica napus HOM05D009911 ORTHO05D009712 2.1e-07 59.7 136 26.5
TAR362G0352 Trochodendron aralioides HOM05D008191 ORTHO05D010044 2.1e-07 59.7 117 28.2
Carub.0001s0871 Capsella rubella HOM05D009911 ORTHO05D009712 1.0e-06 57.4 127 27.6
Sed0004364 Sechium edule HOM05D011459 ORTHO05D013640 1.4e-06 57.0 137 28.5
Thhalv10009592m.g Eutrema salsugineum HOM05D013394 ORTHO05D009712 1.8e-06 56.6 135 28.9
Cfa004856 Carpinus fangiana HOM05D012615 ORTHO05D010044 8.8e-06 54.3 124 25.8


User provided reference genes

Program Settings