Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C030968.2 Cucumis melo HOM05D007214 ORTHO05D008907 6.6e-52 207.2 115 100.0
CsaV3_3G041890 Cucumis sativus L. HOM05D062301 ORTHO05D008907 1.6e-21 106.3 106 62.3
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 5.7e-19 97.8 93 52.7
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 2.8e-18 95.5 92 55.4
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 2.4e-17 92.4 93 51.6
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 2.0e-16 89.4 92 47.8
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 3.4e-16 88.6 92 48.9
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 4.5e-16 88.2 92 52.2
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 5.9e-16 87.8 102 46.1
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 5.9e-16 87.8 93 51.6
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 7.7e-16 87.4 92 47.8
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 1.0e-15 87.0 92 50.0
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 1.3e-15 86.7 93 46.2
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 2.2e-15 85.9 91 48.4
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 3.8e-15 85.1 92 50.0
DCAR_011179 Daucus carota HOM05D007214 ORTHO05D008907 1.9e-14 82.8 112 40.2
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 5.5e-14 81.3 102 39.2
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 1.2e-13 80.1 104 39.4
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 1.6e-13 79.7 92 44.6
Rhsim10G0029100 Rhododendron simsii HOM05D007214 ORTHO05D008907 3.6e-13 78.6 83 51.8
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 6.1e-13 77.8 102 43.1
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 1.8e-12 76.3 92 44.6
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 3.0e-12 75.5 92 42.4
MBI15_g38192_MAGBIO Magnolia biondii HOM05D007214 ORTHO05D008907 3.0e-12 75.5 92 43.5
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 6.7e-12 74.3 78 51.3
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 6.7e-12 74.3 78 51.3
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 2.5e-11 72.4 92 44.6
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 2.5e-11 72.4 72 48.6
Sabra17G0065100 Salix brachista HOM05D007214 ORTHO05D008907 4.3e-11 71.6 72 48.6
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 1.3e-10 70.1 92 41.3
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 1.7e-10 69.7 93 40.9
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 8.2e-10 67.4 63 54.0
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 1.8e-09 66.2 77 44.2
Eucgr.J02159 Eucalyptus grandis HOM05D007214 ORTHO05D008907 2.4e-09 65.9 92 40.2
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 2.4e-09 65.9 73 46.6
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 3.1e-09 65.5 70 47.1
Sed0019253 Sechium edule HOM05D007214 ORTHO05D008907 3.1e-09 65.5 65 52.3
TAR629G0039 Trochodendron aralioides HOM05D000068 ORTHO05D008907 4.1e-09 65.1 92 40.2
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 6.9e-09 64.3 92 42.4
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 9.1e-09 63.9 68 52.9
HPP92_010494 Vanilla planifolia HOM05D007214 ORTHO05D008907 9.1e-09 63.9 91 41.8
Os06g0235900 Oryza sativa ssp. japonica HOM05D007214 ORTHO05D008907 7.7e-08 60.8 91 37.4
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 7.7e-08 60.8 77 46.8
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 1.0e-07 60.5 102 34.3
CDE02G1584 Ceratophyllum demersum HOM05D007214 ORTHO05D008907 1.7e-07 59.7 92 35.9
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 1.7e-07 59.7 92 35.9
Sabra07G0063000 Salix brachista HOM05D007214 ORTHO05D008907 3.2e-06 55.5 74 36.5
ClCG10G014670 Citrullus lanatus HOM05D062301 ORTHO05D008907 9.4e-06 53.9 38 63.2
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 9.4e-06 53.9 92 35.9


User provided reference genes

Program Settings