Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C030880.2 Cucumis melo HOM05D006404 ORTHO05D008170 2.5e-65 251.9 121 100.0
MELO3C034790.2 Cucumis melo HOM05D006404 ORTHO05D008170 2.1e-32 142.5 88 78.4
MELO3C015171.2 Cucumis melo HOM05D006404 ORTHO05D008170 3.7e-29 131.7 90 74.4
CsaV3_1G042990 Cucumis sativus L. HOM05D006404 ORTHO05D008170 4.9e-29 131.3 90 73.3
Sed0002434 Sechium edule HOM05D006404 ORTHO05D008170 7.8e-27 124.0 92 66.3
ClCG03G013070 Citrullus lanatus HOM05D006404 ORTHO05D008170 5.0e-26 121.3 90 67.8
QL01p004100 Quercus lobata HOM05D006404 ORTHO05D008170 5.8e-22 107.8 82 64.6
FAN25G0856 Fragaria x ananassa HOM05D006404 ORTHO05D008170 9.8e-22 107.1 86 61.6
FvH4_3g28450 Fragaria vesca HOM05D006404 ORTHO05D008170 1.3e-21 106.7 86 61.6
FAN11G2181 Fragaria x ananassa HOM05D006404 ORTHO05D008170 1.3e-21 106.7 86 61.6
FAN16G0405 Fragaria x ananassa HOM05D006404 ORTHO05D008170 1.3e-21 106.7 86 61.6
FAN21G1559 Fragaria x ananassa HOM05D006404 ORTHO05D008170 2.2e-21 105.9 86 60.5
MD03G1172000 Malus domestica HOM05D006404 ORTHO05D008170 2.9e-21 105.5 86 59.3
TWI32G0006 Tripterygium wilfordii HOM05D006404 ORTHO05D008170 4.9e-21 104.8 87 57.5
Prupe.4G254900 Prunus persica HOM05D006404 ORTHO05D008170 1.1e-20 103.6 86 60.5
Haze_23174 Corylus avellana HOM05D006404 ORTHO05D008170 1.4e-20 103.2 83 60.2
Gohir.D09G109000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 1.4e-20 103.2 91 58.2
Gorai.006G126600 Gossypium raimondii HOM05D006404 ORTHO05D008170 1.4e-20 103.2 91 58.2
Cfa009810 Carpinus fangiana HOM05D006404 ORTHO05D008170 4.1e-20 101.7 86 58.1
CiPaw.13G154900 Carya illinoinensis HOM05D006404 ORTHO05D008170 7.0e-20 100.9 86 57.0
Gorai.009G074000 Gossypium raimondii HOM05D006404 ORTHO05D008170 9.2e-20 100.5 98 54.1
Gohir.D05G072932 Gossypium hirsutum HOM05D006404 ORTHO05D008170 1.2e-19 100.1 98 54.1
RcHm_v2.0_Chr5g0053011 Rosa chinensis HOM05D006404 ORTHO05D008170 1.2e-19 100.1 83 61.4
GSVIVG01031534001 Vitis vinifera HOM05D006404 ORTHO05D008170 1.2e-19 100.1 86 58.1
CANSAT54G0859 Cannabis sativa HOM05D006404 ORTHO05D008170 2.7e-19 99.0 86 55.8
Thecc.09G239000 Theobroma cacao HOM05D006404 ORTHO05D008170 2.7e-19 99.0 102 52.0
CSS0037938 Camellia sinensis var. sinensis HOM05D006404 ORTHO05D008170 3.5e-19 98.6 86 55.8
MELO3C028471.2 Cucumis melo HOM05D006404 ORTHO05D008170 4.6e-19 98.2 52 88.5
Actinidia06923 Actinidia chinensis HOM05D006404 ORTHO05D008170 6.0e-19 97.8 86 57.0
Actinidia16347 Actinidia chinensis HOM05D006404 ORTHO05D008170 7.8e-19 97.4 86 55.8
Rhsim13G0217700 Rhododendron simsii HOM05D006404 ORTHO05D008170 1.0e-18 97.1 86 55.8
Ciclev10014162m.g Citrus clementina HOM05D006404 ORTHO05D008170 1.3e-18 96.7 86 57.0
Atru.chr3.2649 Acer truncatum HOM05D006404 ORTHO05D008170 1.7e-18 96.3 87 57.5
Eucgr.B03709 Eucalyptus grandis HOM05D006404 ORTHO05D008170 2.3e-18 95.9 86 55.8
Potri.001G255700 Populus trichocarpa HOM05D006404 ORTHO05D008170 2.3e-18 95.9 86 53.5
Lj3g0019929 Lotus japonicus HOM05D006404 ORTHO05D008170 3.9e-18 95.1 86 58.1
Potri.009G051100 Populus trichocarpa HOM05D006404 ORTHO05D008170 3.9e-18 95.1 86 54.7
Nitab4.5_0006123g0010 Nicotiana tabacum HOM05D006404 ORTHO05D008170 5.0e-18 94.7 86 52.3
Psat7g172680 Pisum sativum HOM05D006404 ORTHO05D008170 5.0e-18 94.7 86 57.0
TAR633G0603 Trochodendron aralioides HOM05D006404 ORTHO05D008170 5.0e-18 94.7 86 53.5
Manes.06G162300 Manihot esculenta HOM05D006404 ORTHO05D008170 6.6e-18 94.4 98 49.0
Sopen11g025080 Solanum pennellii HOM05D006404 ORTHO05D008170 6.6e-18 94.4 97 49.5
Nitab4.5_0007711g0010 Nicotiana tabacum HOM05D006404 ORTHO05D008170 8.6e-18 94.0 94 50.0
TPR.G13759 Trifolium pratense HOM05D006404 ORTHO05D008170 8.6e-18 94.0 86 55.8
Solyc11g065340.2 Solanum lycopersicum HOM05D006404 ORTHO05D008170 1.1e-17 93.6 98 46.9
Sc16g0011280 Simmondsia chinensis HOM05D006404 ORTHO05D008170 3.3e-17 92.0 86 51.2
Cpa.g.sc84.27 Carica papaya HOM05D006404 ORTHO05D008170 4.3e-17 91.7 91 50.5
Hund07470 Selenicereus undatus HOM05D006404 ORTHO05D008170 4.3e-17 91.7 102 46.1
AUR62039864 Chenopodium quinoa HOM05D006404 ORTHO05D008170 5.6e-17 91.3 99 48.5
VMungo1215G1207 Vigna mungo HOM05D006404 ORTHO05D008170 5.6e-17 91.3 90 53.3
arahy.Tifrunner.gnm1.ann1.BK260Y Arachis hypogaea HOM05D006404 ORTHO05D008170 7.3e-17 90.9 86 55.8
arahy.Tifrunner.gnm1.ann1.E0EAPG Arachis hypogaea HOM05D006404 ORTHO05D008170 7.3e-17 90.9 86 55.8
AUR62000151 Chenopodium quinoa HOM05D006404 ORTHO05D008170 7.3e-17 90.9 99 46.5
Lalb_Chr03g0024521 Lupinus albus HOM05D006404 ORTHO05D008170 7.3e-17 90.9 100 52.0
PGR102G1713 Punica granatum HOM05D006404 ORTHO05D008170 7.3e-17 90.9 90 48.9
Medtr4g076810 Medicago truncatula HOM05D006404 ORTHO05D008170 9.5e-17 90.5 90 52.2
CAN.G494.3 Capsicum annuum HOM05D006404 ORTHO05D008170 1.6e-16 89.7 94 46.8
Peaxi162Scf00004g03311 Petunia axillaris HOM05D006404 ORTHO05D008170 1.6e-16 89.7 94 48.9
Sabra09G0037200 Salix brachista HOM05D006404 ORTHO05D008170 1.6e-16 89.7 86 51.2
SEGI_17812 Sequoiadendron giganteum HOM05D006404 ORTHO05D008170 1.6e-16 89.7 97 45.4
PGSC0003DMG400029994 Solanum tuberosum HOM05D006404 ORTHO05D008170 2.1e-16 89.4 98 45.9
Glyma.01G227500 Glycine max HOM05D006404 ORTHO05D008170 2.8e-16 89.0 94 50.0
Lsat_1_v5_gn_6_25840 Lactuca sativa HOM05D006404 ORTHO05D008170 2.8e-16 89.0 89 47.2
Ca_26059_v3 Cicer arietinum L. HOM05D006404 ORTHO05D008170 8.1e-16 87.4 86 51.2
Ca_30127_v3 Cicer arietinum L. HOM05D006404 ORTHO05D008170 8.1e-16 87.4 86 51.2
Glyma.11G094500 Glycine max HOM05D006404 ORTHO05D008170 8.1e-16 87.4 86 55.8
HanXRQChr13g0401241 Helianthus annuus HOM05D006404 ORTHO05D008170 8.1e-16 87.4 91 46.2
COL.COLO4_36457 Corchorus olitorius HOM05D006404 ORTHO05D008170 1.4e-15 86.7 91 48.4
DCAR_029968 Daucus carota HOM05D006404 ORTHO05D008170 1.8e-15 86.3 99 42.4
ECA233G0536 Erigeron canadensis HOM05D006404 ORTHO05D008170 4.0e-15 85.1 86 45.3
Glyma.12G020900 Glycine max HOM05D006404 ORTHO05D008170 5.2e-15 84.7 86 53.5
VMungo1127G0106 Vigna mungo HOM05D006404 ORTHO05D008170 2.0e-14 82.8 86 52.3
Phvul.011G076700 Phaseolus vulgaris HOM05D006404 ORTHO05D008170 3.4e-14 82.0 86 52.3
Oeu061307.1 Olea europaea HOM05D006404 ORTHO05D008170 5.8e-14 81.3 94 42.6
MSTRG.12459 Avicennia marina HOM05D006404 ORTHO05D008170 1.3e-13 80.1 86 43.0
Nn2g15163 Nelumbo nucifera HOM05D006404 ORTHO05D008170 4.9e-13 78.2 90 43.3
Migut.N02343 Erythranthe guttata HOM05D006404 ORTHO05D008170 1.1e-12 77.0 86 45.3
Nn7g36358 Nelumbo nucifera HOM05D006404 ORTHO05D008170 1.4e-12 76.6 86 43.0
Cc01_g05020 Coffea canephora HOM05D006404 ORTHO05D008170 3.2e-12 75.5 102 38.2
Gohir.A09G112350 Gossypium hirsutum HOM05D006404 ORTHO05D008170 3.2e-12 75.5 60 61.7
MELO3C034469.2 Cucumis melo HOM05D006404 ORTHO05D003726 4.1e-12 75.1 97 45.4
THA.LOC104811179 Tarenaya hassleriana HOM05D006404 ORTHO05D008170 7.1e-12 74.3 91 44.0
Thecc.01G390500 Theobroma cacao HOM05D006404 ORTHO05D008170 7.1e-12 74.3 55 63.6
HPP92_028181 Vanilla planifolia HOM05D006404 ORTHO05D008170 9.2e-12 73.9 90 40.0
SGA_v2.0_scaffold3G01478 Striga asiatica HOM05D006404 ORTHO05D008170 2.1e-11 72.8 92 41.3
Aqoxy2G00213 Aquilegia oxysepala HOM05D006404 ORTHO05D008170 2.7e-11 72.4 83 42.2
ATR0307G124 Amborella trichopoda HOM05D006404 ORTHO05D008170 7.8e-11 70.9 82 40.2
Mapoly0128s0014 Marchantia polymorpha HOM05D006404 ORTHO05D008170 7.8e-11 70.9 86 38.4
unitig_27.g24999 Utricularia gibba HOM05D006404 ORTHO05D008170 3.0e-10 68.9 85 36.5
Zm00001eb332810 Zea mays HOM05D006404 ORTHO05D008170 5.1e-10 68.2 97 35.1
Duzib168G1842 Durio zibethinus HOM05D006404 ORTHO05D008170 7.3e-09 64.3 68 45.6
vmacro04128 Vaccinium macrocarpon HOM05D006404 ORTHO05D008170 2.8e-08 62.4 82 42.7
Sabra16G0156500 Salix brachista HOM05D006404 ORTHO05D008170 4.7e-08 61.6 62 48.4
MBI19_g45588_MAGBIO Magnolia biondii HOM05D006404 ORTHO05D008170 3.1e-07 58.9 67 40.3
Ah.06g193910 Amaranthus hybridus HOM05D006404 ORTHO05D008170 4.0e-07 58.5 62 45.2
Manes.14G004336 Manihot esculenta HOM05D006404 ORTHO05D008170 5.8e-06 54.7 86 34.9


User provided reference genes

Program Settings