Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C030878.2 Cucumis melo HOM05D009637 ORTHO05D012223 3.2e-113 411.8 206 100.0
Os01g0312600 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 1.3e-21 107.5 149 43.6
SGA_v2.0_scaffold1G00352 Striga asiatica HOM05D009637 ORTHO05D012223 2.1e-16 90.1 149 40.9
Sc08g0009140 Simmondsia chinensis HOM05D009637 ORTHO05D012223 6.2e-16 88.6 152 40.1
SGA_v2.0_scaffold71G23926 Striga asiatica HOM05D009637 ORTHO05D012223 1.1e-15 87.8 98 53.1
Os01g0788451 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 7.5e-14 81.6 143 40.6
unitig_51.g30985 Utricularia gibba HOM05D009637 ORTHO05D012223 1.7e-13 80.5 129 44.2
Os07g0675133 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 1.9e-12 77.0 99 46.5
Zm00001eb014040 Zea mays HOM05D009637 ORTHO05D012223 4.6e-11 72.4 142 38.0
Os09g0545550 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 1.3e-10 70.9 157 35.0
Os01g0880350 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 1.9e-09 67.0 156 34.6
Os02g0783050 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 7.3e-09 65.1 92 46.7
SGA_v2.0_scaffold80G25886 Striga asiatica HOM05D009637 ORTHO05D012223 1.2e-08 64.3 146 36.3
FAN27G0990 Fragaria x ananassa HOM05D009637 ORTHO05D012223 6.2e-08 62.0 59 59.3
SGA_v2.0_scaffold2G01186 Striga asiatica HOM05D038487 ORTHO05D035046 6.2e-08 62.0 170 34.1
Os01g0254350 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 5.2e-07 58.9 70 51.4
SGA_v2.0_scaffold118G32470 Striga asiatica HOM05D009637 ORTHO05D012223 1.2e-06 57.8 168 34.5
Os04g0641250 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 4.4e-06 55.8 141 31.9


User provided reference genes

Program Settings