Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C030860.2 Cucumis melo HOM05D005133 ORTHO05D006685 4.1e-38 161.0 86 100.0
MELO3C030134.2 Cucumis melo HOM05D005133 ORTHO05D006685 3.1e-22 108.2 127 55.9
MELO3C032291.2 Cucumis melo HOM05D005133 ORTHO05D167678 2.6e-16 88.6 87 63.2
MELO3C029591.2 Cucumis melo HOM05D005133 ORTHO05D168107 1.7e-15 85.9 45 97.8
MELO3C033838.2 Cucumis melo HOM05D005133 ORTHO05D166559 2.2e-15 85.5 82 64.6
MELO3C031967.2 Cucumis melo HOM05D005133 ORTHO05D165940 1.7e-12 75.9 131 44.3
LjContig00310g0005517 Lotus japonicus HOM05D005133 ORTHO05D006685 3.4e-08 61.6 92 48.9
COL.COLO4_06373 Corchorus olitorius HOM05D005133 ORTHO05D006685 4.4e-08 61.2 47 76.6
ClCG05G014200 Citrullus lanatus HOM05D005133 ORTHO05D006685 1.3e-07 59.7 47 74.5
CsaV3_3G008530 Cucumis sativus L. HOM05D005133 ORTHO05D006685 1.3e-07 59.7 47 74.5
Gohir.A07G140500 Gossypium hirsutum HOM05D005133 ORTHO05D006685 1.3e-07 59.7 47 74.5
Gohir.D07G145800 Gossypium hirsutum HOM05D005133 ORTHO05D006685 1.3e-07 59.7 47 74.5
Gorai.001G158000 Gossypium raimondii HOM05D005133 ORTHO05D006685 1.3e-07 59.7 47 74.5
Thecc.01G351000 Theobroma cacao HOM05D005133 ORTHO05D006685 1.3e-07 59.7 47 74.5
Cpa.g.sc11.53 Carica papaya HOM05D005133 ORTHO05D006685 1.7e-07 59.3 82 51.2
CSS0000155 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 2.2e-07 58.9 47 72.3
CSS0009332 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 2.2e-07 58.9 47 72.3
CANSAT01G0674 Cannabis sativa HOM05D005133 ORTHO05D006685 2.2e-07 58.9 47 70.2
Potri.014G091400 Populus trichocarpa HOM05D005133 ORTHO05D006685 2.2e-07 58.9 47 70.2
GSVIVG01027010001 Vitis vinifera HOM05D005133 ORTHO05D006685 2.2e-07 58.9 47 72.3
CiPaw.02G036200 Carya illinoinensis HOM05D005133 ORTHO05D006685 2.8e-07 58.5 47 70.2
Duzib133G0222 Durio zibethinus HOM05D005133 ORTHO05D006685 3.7e-07 58.2 47 72.3
Sed0023612 Sechium edule HOM05D005133 ORTHO05D006685 3.7e-07 58.2 47 72.3
Ca_20805_v3 Cicer arietinum L. HOM05D005133 ORTHO05D006685 4.9e-07 57.8 65 58.5
Ciclev10020434m.g Citrus clementina HOM05D005133 ORTHO05D006685 6.3e-07 57.4 47 70.2
MELO3C006074.2 Cucumis melo HOM05D005133 ORTHO05D006685 6.3e-07 57.4 44 77.3
Lj7C506T5 Lonicera japonica HOM05D005133 ORTHO05D006685 6.3e-07 57.4 47 70.2
Peaxi162Scf00020g01713 Petunia axillaris HOM05D005133 ORTHO05D006685 6.3e-07 57.4 47 72.3
QL07p038619 Quercus lobata HOM05D005133 ORTHO05D006685 6.3e-07 57.4 56 64.3
MSTRG.20869 Avicennia marina HOM05D005133 ORTHO05D006685 8.3e-07 57.0 47 70.2
CSS0040148 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 1.1e-06 56.6 47 70.2
Cfa007878 Carpinus fangiana HOM05D005133 ORTHO05D006685 1.1e-06 56.6 47 68.1
MELO3C033909.2 Cucumis melo HOM05D005133 ORTHO05D020525 1.1e-06 56.6 38 81.6
Sabra14G0066300 Salix brachista HOM05D005133 ORTHO05D006685 1.1e-06 56.6 43 74.4
Cc06_g17440 Coffea canephora HOM05D005133 ORTHO05D006685 1.4e-06 56.2 47 68.1
Haze_14198 Corylus avellana HOM05D005133 ORTHO05D006685 1.4e-06 56.2 47 68.1
Dinv43872 Davidia involucrata HOM05D005133 ORTHO05D006685 1.4e-06 56.2 47 68.1
Manes.01G251600 Manihot esculenta HOM05D005133 ORTHO05D006685 1.4e-06 56.2 87 46.0
Nitab4.5_0000915g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 1.8e-06 55.8 47 70.2
Atru.chr5.593 Acer truncatum HOM05D005133 ORTHO05D006685 2.4e-06 55.5 47 68.1
Glyma.12G050200 Glycine max HOM05D005133 ORTHO05D006685 2.4e-06 55.5 47 68.1
Rhsim07G0009300 Rhododendron simsii HOM05D005133 ORTHO05D006685 3.1e-06 55.1 47 68.1
Actinidia20170 Actinidia chinensis HOM05D005133 ORTHO05D006685 4.1e-06 54.7 52 61.5
Dinv32531 Davidia involucrata HOM05D005133 ORTHO05D006685 4.1e-06 54.7 47 68.1
ECA234G4221 Erigeron canadensis HOM05D005133 ORTHO05D006685 4.1e-06 54.7 80 46.2
Nitab4.5_0003501g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 4.1e-06 54.7 47 68.1
Solyc01g095230.4 Solanum lycopersicum HOM05D005133 ORTHO05D006685 5.4e-06 54.3 47 70.2
Sopen01g039020 Solanum pennellii HOM05D005133 ORTHO05D006685 5.4e-06 54.3 47 70.2
PGSC0003DMG401000198 Solanum tuberosum HOM05D005133 ORTHO05D006685 5.4e-06 54.3 47 70.2
TPR.G34211 Trifolium pratense HOM05D005133 ORTHO05D006685 5.4e-06 54.3 47 66.0
Ah.05g180080 Amaranthus hybridus HOM05D005133 ORTHO05D006685 7.0e-06 53.9 47 68.1
Cfa003860 Carpinus fangiana HOM05D005133 ORTHO05D006685 7.0e-06 53.9 47 63.8
Oeu015214.1 Olea europaea HOM05D005133 ORTHO05D006685 7.0e-06 53.9 43 72.1
arahy.Tifrunner.gnm1.ann1.JRPH7J Arachis hypogaea HOM05D005133 ORTHO05D006685 9.2e-06 53.5 47 68.1
Medtr4g068010 Medicago truncatula HOM05D005133 ORTHO05D006685 9.2e-06 53.5 44 70.5
VMungo1127G1104 Vigna mungo HOM05D005133 ORTHO05D006685 9.2e-06 53.5 47 66.0


User provided reference genes

Program Settings