Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C030826.2 Cucumis melo HOM05D019402 ORTHO05D020529 2.9e-76 288.5 145 100.0
MELO3C035075.2 Cucumis melo HOM05D019402 ORTHO05D020529 1.1e-62 243.4 133 94.0
MELO3C034400.2 Cucumis melo HOM05D019402 ORTHO05D020529 4.5e-37 158.3 88 94.3
CsaV3_7G022940 Cucumis sativus L. HOM05D000092 ORTHO05D000042 1.9e-32 142.9 99 69.7
MELO3C035030.2 Cucumis melo HOM05D019402 ORTHO05D020529 1.5e-29 133.3 69 91.3
MELO3C034399.2 Cucumis melo HOM05D019402 ORTHO05D020529 2.4e-14 82.8 42 92.9
CsaV3_2G035990 Cucumis sativus L. HOM05D000092 ORTHO05D020529 2.4e-14 82.8 47 80.9
Sed0007889 Sechium edule HOM05D000092 ORTHO05D000042 4.1e-14 82.0 114 38.6
ClCG07G003020 Citrullus lanatus HOM05D000092 ORTHO05D000042 6.9e-14 81.3 93 43.0
ClCG07G002990 Citrullus lanatus HOM05D000092 ORTHO05D009021 3.4e-13 79.0 122 37.7
QL03p002957 Quercus lobata HOM05D000092 ORTHO05D000042 6.1e-10 68.2 97 42.3
QL03p003358 Quercus lobata HOM05D000092 ORTHO05D000042 2.3e-09 66.2 100 40.0
Potri.019G036875 Populus trichocarpa HOM05D000092 ORTHO05D000042 6.7e-09 64.7 115 32.2
Sabra13G0028000 Salix brachista HOM05D000092 ORTHO05D000042 1.5e-08 63.5 95 34.7
QL03p003203 Quercus lobata HOM05D000092 ORTHO05D000042 2.0e-08 63.2 99 39.4
MELO3C024717.2 Cucumis melo HOM05D000092 ORTHO05D000042 3.3e-08 62.4 86 40.7
Sed0023349 Sechium edule HOM05D000092 ORTHO05D000042 3.3e-08 62.4 98 37.8
MELO3C008572.2 Cucumis melo HOM05D000092 ORTHO05D000042 2.2e-07 59.7 88 40.9
Potri.005G041101 Populus trichocarpa HOM05D000092 ORTHO05D000042 3.7e-07 58.9 77 40.3
Medtr2g071860 Medicago truncatula HOM05D000092 ORTHO05D000042 6.3e-07 58.2 74 36.5
Medtr2g072080 Medicago truncatula HOM05D000092 ORTHO05D000042 6.3e-07 58.2 74 36.5
arahy.Tifrunner.gnm1.ann1.IEL5NN Arachis hypogaea HOM05D000092 ORTHO05D000042 8.2e-07 57.8 99 30.3
Potri.013G027300 Populus trichocarpa HOM05D000092 ORTHO05D000042 8.2e-07 57.8 121 30.6
Sed0018071 Sechium edule HOM05D000092 ORTHO05D000042 8.2e-07 57.8 65 47.7
QL03p003333 Quercus lobata HOM05D000092 ORTHO05D000042 1.8e-06 56.6 80 41.2
CsaV3_1G020780 Cucumis sativus L. HOM05D019402 ORTHO05D020529 2.4e-06 56.2 78 39.7
QL09p045529 Quercus lobata HOM05D000002 ORTHO05D000001 2.4e-06 56.2 107 33.6
Sed0006063 Sechium edule HOM05D000092 ORTHO05D000042 2.4e-06 56.2 108 35.2
CsaV3_2G010470 Cucumis sativus L. HOM05D000092 ORTHO05D000042 3.1e-06 55.8 98 37.8
Duzib128G0434 Durio zibethinus HOM05D000092 ORTHO05D000042 3.1e-06 55.8 107 33.6
Dinv01598 Davidia involucrata HOM05D000092 ORTHO05D000042 4.1e-06 55.5 117 34.2
Gohir.D11G325750 Gossypium hirsutum HOM05D000092 ORTHO05D000042 4.1e-06 55.5 84 36.9
Phvul.008G071300 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 4.1e-06 55.5 95 34.7
Dinv40988 Davidia involucrata HOM05D000092 ORTHO05D000042 5.3e-06 55.1 109 34.9
Potri.005G042900 Populus trichocarpa HOM05D000092 ORTHO05D000042 5.3e-06 55.1 92 39.1
Thecc.05G224600 Theobroma cacao HOM05D000092 ORTHO05D000042 5.3e-06 55.1 83 31.3
ClCG02G016220 Citrullus lanatus HOM05D000092 ORTHO05D000042 6.9e-06 54.7 67 38.8
Gohir.D11G325900 Gossypium hirsutum HOM05D000092 ORTHO05D000042 6.9e-06 54.7 99 31.3
TPR.G13790 Trifolium pratense HOM05D000092 ORTHO05D000042 6.9e-06 54.7 99 34.3
TPR.G27627 Trifolium pratense HOM05D000092 ORTHO05D000042 9.1e-06 54.3 95 32.6


User provided reference genes

Program Settings