Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C030790.2 Cucumis melo HOM05D002580 ORTHO05D002811 2.3e-87 325.5 158 100.0
CiPaw.08G022800 Carya illinoinensis HOM05D002580 ORTHO05D002811 1.9e-12 76.6 101 48.5
MD15G1099300 Malus domestica HOM05D002580 ORTHO05D002811 1.6e-11 73.6 102 44.1
Potri.018G036500 Populus trichocarpa HOM05D002580 ORTHO05D002811 2.1e-11 73.2 101 45.5
Sabra18G0037100 Salix brachista HOM05D002580 ORTHO05D002811 2.1e-11 73.2 101 45.5
MD09G1219000 Malus domestica HOM05D002580 ORTHO05D002811 1.0e-10 70.9 60 53.3
TWI63G0291 Tripterygium wilfordii HOM05D002580 ORTHO05D002811 1.0e-10 70.9 102 46.1
Dinv30555 Davidia involucrata HOM05D002580 ORTHO05D002811 3.0e-10 69.3 101 39.6
Psat5g300800 Pisum sativum HOM05D002580 ORTHO05D002811 3.0e-10 69.3 102 39.2
TPR.G28303 Trifolium pratense HOM05D002580 ORTHO05D002811 3.0e-10 69.3 105 39.0
Nn2g11906 Nelumbo nucifera HOM05D002580 ORTHO05D002811 5.1e-10 68.6 101 42.6
Potri.006G244000 Populus trichocarpa HOM05D002580 ORTHO05D002811 5.1e-10 68.6 101 43.6
QL12p026165 Quercus lobata HOM05D002580 ORTHO05D002811 8.6e-10 67.8 101 43.6
Sed0003524 Sechium edule HOM05D002580 ORTHO05D002811 1.1e-09 67.4 101 43.6
CSS0024422 Camellia sinensis var. sinensis HOM05D002580 ORTHO05D002811 1.9e-09 66.6 103 38.8
CiPaw.07G208200 Carya illinoinensis HOM05D002580 ORTHO05D002811 2.5e-09 66.2 101 43.6
Atru.chr7.2296 Acer truncatum HOM05D002580 ORTHO05D002811 3.3e-09 65.9 101 41.6
Prupe.3G077800 Prunus persica HOM05D002580 ORTHO05D002811 4.3e-09 65.5 68 44.1
Sabra06G0190900 Salix brachista HOM05D002580 ORTHO05D002811 4.3e-09 65.5 101 41.6
Sed0015599 Sechium edule HOM05D002580 ORTHO05D002811 4.3e-09 65.5 101 43.6
Manes.03G065900 Manihot esculenta HOM05D002580 ORTHO05D002811 5.6e-09 65.1 101 41.6
Rhsim08G0217300 Rhododendron simsii HOM05D002580 ORTHO05D002811 5.6e-09 65.1 101 39.6
TPR.G1336 Trifolium pratense HOM05D002580 ORTHO05D002811 5.6e-09 65.1 101 40.6
Lj5A67G52 Lonicera japonica HOM05D002580 ORTHO05D002811 7.3e-09 64.7 101 37.6
EL10Ac5g12299 Beta vulgaris HOM05D002580 ORTHO05D002811 9.5e-09 64.3 101 41.6
Cc00_g03580 Coffea canephora HOM05D002580 ORTHO05D002811 9.5e-09 64.3 60 48.3
Thecc.06G076800 Theobroma cacao HOM05D002580 ORTHO05D002811 9.5e-09 64.3 68 45.6
Glyma.13G362500 Glycine max HOM05D002580 ORTHO05D002811 1.2e-08 63.9 105 36.2
TPR.G37286 Trifolium pratense HOM05D002580 ORTHO05D002811 1.2e-08 63.9 101 36.6
GSVIVG01035711001 Vitis vinifera HOM05D002580 ORTHO05D002811 1.2e-08 63.9 101 41.6
ATR0026G056 Amborella trichopoda HOM05D002580 ORTHO05D002811 2.8e-08 62.8 101 37.6
arahy.Tifrunner.gnm1.ann1.TCI6JY Arachis hypogaea HOM05D002580 ORTHO05D002811 2.8e-08 62.8 99 39.4
CANSAT25G2149 Cannabis sativa HOM05D002580 ORTHO05D002811 2.8e-08 62.8 108 40.7
Hund14504 Selenicereus undatus HOM05D002580 ORTHO05D002811 2.8e-08 62.8 120 38.3
TAR636G1605 Trochodendron aralioides HOM05D002580 ORTHO05D005268 3.6e-08 62.4 68 45.6
MELO3C003593.2 Cucumis melo HOM05D002580 ORTHO05D002811 4.7e-08 62.0 101 42.6
arahy.Tifrunner.gnm1.ann1.5I1UYP Arachis hypogaea HOM05D002580 ORTHO05D002811 8.1e-08 61.2 91 39.6
Haze_21826 Corylus avellana HOM05D002580 ORTHO05D002811 8.1e-08 61.2 93 40.9
Prupe.1G454000 Prunus persica HOM05D002580 ORTHO05D002811 8.1e-08 61.2 102 42.2
Medtr2g062470 Medicago truncatula HOM05D002580 ORTHO05D002811 1.1e-07 60.8 104 38.5
TAR624G0927 Trochodendron aralioides HOM05D002580 ORTHO05D002811 1.1e-07 60.8 105 41.9
Actinidia15808 Actinidia chinensis HOM05D002580 ORTHO05D002811 1.4e-07 60.5 68 42.6
TWI34G0308 Tripterygium wilfordii HOM05D002580 ORTHO05D002811 1.4e-07 60.5 94 43.6
AUR62027415 Chenopodium quinoa HOM05D002580 ORTHO05D002811 1.8e-07 60.1 101 40.6
Lsat_1_v5_gn_6_11320 Lactuca sativa HOM05D002580 ORTHO05D002811 1.8e-07 60.1 94 41.5
CARHR201760 Cardamine hirsuta HOM05D002580 ORTHO05D002811 2.3e-07 59.7 68 44.1
Ca_01092_v3 Cicer arietinum L. HOM05D002580 ORTHO05D002811 2.3e-07 59.7 68 42.6
Duzib160G0035 Durio zibethinus HOM05D002580 ORTHO05D002811 2.3e-07 59.7 102 33.3
Lsat_1_v5_gn_5_132781 Lactuca sativa HOM05D002580 ORTHO05D002811 2.3e-07 59.7 79 40.5
Phvul.005G174200 Phaseolus vulgaris HOM05D002580 ORTHO05D002811 2.3e-07 59.7 100 36.0
Ah.14g085370 Amaranthus hybridus HOM05D002580 ORTHO05D002811 3.1e-07 59.3 129 35.7
QL05p027138 Quercus lobata HOM05D002580 ORTHO05D002811 3.1e-07 59.3 104 36.5
Sopen02g018970 Solanum pennellii HOM05D002580 ORTHO05D002811 3.1e-07 59.3 101 37.6
GSVIVG01017217001 Vitis vinifera HOM05D002580 ORTHO05D002811 3.1e-07 59.3 68 44.1
Ca_15624_v3 Cicer arietinum L. HOM05D002580 ORTHO05D002811 4.0e-07 58.9 102 39.2
VMungo1309G0355 Vigna mungo HOM05D002580 ORTHO05D002811 4.0e-07 58.9 101 37.6
Medtr3g109470 Medicago truncatula HOM05D002580 ORTHO05D002811 5.2e-07 58.5 102 41.2
COL.COLO4_12866 Corchorus olitorius HOM05D002580 ORTHO05D002811 6.8e-07 58.2 68 39.7
ClCG11G013960 Citrullus lanatus HOM05D002580 ORTHO05D002811 8.9e-07 57.8 68 47.1
Glyma.06G081000 Glycine max HOM05D002580 ORTHO05D002811 8.9e-07 57.8 101 36.6
AUR62031278 Chenopodium quinoa HOM05D002580 ORTHO05D002811 1.2e-06 57.4 68 44.1
Lj1g0017255 Lotus japonicus HOM05D002580 ORTHO05D002811 1.2e-06 57.4 101 38.6
Phvul.009G105200 Phaseolus vulgaris HOM05D002580 ORTHO05D002811 1.2e-06 57.4 101 37.6
Sc23g0005840 Simmondsia chinensis HOM05D002580 ORTHO05D002811 1.2e-06 57.4 102 37.3
CAN.G954.28 Capsicum annuum HOM05D002580 ORTHO05D002811 1.5e-06 57.0 101 38.6
RcHm_v2.0_Chr2g0136961 Rosa chinensis HOM05D002580 ORTHO05D002811 1.5e-06 57.0 99 38.4
CDE06G0931 Ceratophyllum demersum HOM05D002580 ORTHO05D002811 2.0e-06 56.6 102 37.3
FvH4_2g36260 Fragaria vesca HOM05D002580 ORTHO05D002811 2.0e-06 56.6 104 39.4
FAN27G2969 Fragaria x ananassa HOM05D002580 ORTHO05D002811 2.0e-06 56.6 104 38.5
Hund11333 Selenicereus undatus HOM05D002580 ORTHO05D002811 2.0e-06 56.6 105 36.2
TAR636G1406 Trochodendron aralioides HOM05D002580 ORTHO05D002811 2.0e-06 56.6 71 46.5
VMungo1080G1864 Vigna mungo HOM05D002580 ORTHO05D002811 2.6e-06 56.2 60 38.3
AL6G22130 Arabidopsis lyrata HOM05D002580 ORTHO05D002811 3.4e-06 55.8 101 37.6
Dinv14215 Davidia involucrata HOM05D002580 ORTHO05D002811 3.4e-06 55.8 105 41.9
ECA233G2585 Erigeron canadensis HOM05D002580 ORTHO05D002811 3.4e-06 55.8 84 40.5
Nn8g41288 Nelumbo nucifera HOM05D002580 ORTHO05D002811 3.4e-06 55.8 101 36.6
EL10Ac8g19304 Beta vulgaris HOM05D002580 ORTHO05D002811 4.4e-06 55.5 68 47.1
Thecc.09G038500 Theobroma cacao HOM05D002580 ORTHO05D002811 4.4e-06 55.5 68 50.0
Actinidia15723 Actinidia chinensis HOM05D002580 ORTHO05D002811 5.8e-06 55.1 103 39.8
EL10Ac9g21962 Beta vulgaris HOM05D002580 ORTHO05D002811 5.8e-06 55.1 71 39.4
CSS0037135 Camellia sinensis var. sinensis HOM05D002580 ORTHO05D002811 5.8e-06 55.1 103 35.9
Thhalv10012816m.g Eutrema salsugineum HOM05D002580 ORTHO05D002811 5.8e-06 55.1 117 34.2
Migut.A00235 Erythranthe guttata HOM05D002580 ORTHO05D002811 7.6e-06 54.7 102 40.2
PSO063G1348 Papaver somniferum HOM05D002580 ORTHO05D002811 7.6e-06 54.7 101 37.6
PSO782G1202 Papaver somniferum HOM05D002580 ORTHO05D002811 7.6e-06 54.7 101 36.6
Actinidia14655 Actinidia chinensis HOM05D002580 ORTHO05D002811 9.9e-06 54.3 102 39.2
Eucgr.C01577 Eucalyptus grandis HOM05D002580 ORTHO05D002811 9.9e-06 54.3 103 38.8
FvH4_6g30540 Fragaria vesca HOM05D002580 ORTHO05D002811 9.9e-06 54.3 62 41.9
FAN14G3186 Fragaria x ananassa HOM05D002580 ORTHO05D002811 9.9e-06 54.3 62 41.9
Lalb_Chr08g0243341 Lupinus albus HOM05D002580 ORTHO05D002811 9.9e-06 54.3 101 35.6
HPP92_023329 Vanilla planifolia HOM05D002580 ORTHO05D002811 9.9e-06 54.3 68 39.7


User provided reference genes

Program Settings