Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C030779.2 Cucumis melo HOM05D000764 ORTHO05D004953 1.2e-92 343.2 172 100.0
MELO3C015581.2 Cucumis melo HOM05D000764 ORTHO05D004953 4.7e-17 92.0 89 58.4
CsaV3_1G041680 Cucumis sativus L. HOM05D000764 ORTHO05D004953 1.4e-16 90.5 89 58.4
Sed0024847 Sechium edule HOM05D000764 ORTHO05D004953 2.4e-13 79.7 88 53.4
QL01p009034 Quercus lobata HOM05D000764 ORTHO05D004953 7.7e-12 74.7 94 45.7
Cfa009565 Carpinus fangiana HOM05D000764 ORTHO05D004953 1.7e-11 73.6 90 43.3
FAN21G0270 Fragaria x ananassa HOM05D000764 ORTHO05D004953 2.9e-11 72.8 97 44.3
RcHm_v2.0_Chr5g0083741 Rosa chinensis HOM05D000764 ORTHO05D004953 2.9e-11 72.8 97 45.4
FvH4_3g45550 Fragaria vesca HOM05D000764 ORTHO05D004953 6.5e-11 71.6 97 44.3
FAN11G0762 Fragaria x ananassa HOM05D000764 ORTHO05D004953 6.5e-11 71.6 97 44.3
GSVIVG01025465001 Vitis vinifera HOM05D000764 ORTHO05D004953 6.5e-11 71.6 90 42.2
Sabra01G0002900 Salix brachista HOM05D000764 ORTHO05D004953 8.5e-11 71.2 95 45.3
Potri.001G004200 Populus trichocarpa HOM05D000764 ORTHO05D004953 1.4e-10 70.5 89 41.6
FAN16G0168 Fragaria x ananassa HOM05D000764 ORTHO05D004953 1.9e-10 70.1 97 43.3
CANSAT11G1226 Cannabis sativa HOM05D000764 ORTHO05D004953 3.2e-10 69.3 93 44.1
Dinv06519 Davidia involucrata HOM05D000764 ORTHO05D004953 3.2e-10 69.3 90 43.3
MD03G1004100 Malus domestica HOM05D000764 ORTHO05D004953 5.5e-10 68.6 93 43.0
TAR623G0710 Trochodendron aralioides HOM05D000764 ORTHO05D004953 5.5e-10 68.6 98 40.8
CAN.G1237.43 Capsicum annuum HOM05D000764 ORTHO05D004953 7.2e-10 68.2 93 41.9
Dinv33723 Davidia involucrata HOM05D000764 ORTHO05D004953 7.2e-10 68.2 94 43.6
Potri.003G220800 Populus trichocarpa HOM05D000764 ORTHO05D004953 7.2e-10 68.2 93 41.9
SalBow6G2556 Salvia bowleyana HOM05D000764 ORTHO05D004953 7.2e-10 68.2 88 42.0
CSS0037597 Camellia sinensis var. sinensis HOM05D000764 ORTHO05D004953 9.4e-10 67.8 93 43.0
Cc01_g00030 Coffea canephora HOM05D000764 ORTHO05D004953 9.4e-10 67.8 90 42.2
Prupe.6G003600 Prunus persica HOM05D000764 ORTHO05D004953 9.4e-10 67.8 99 43.4
MBI11_g24613_MAGBIO Magnolia biondii HOM05D000764 ORTHO05D004953 1.2e-09 67.4 94 42.6
Sabra03G0164300 Salix brachista HOM05D000764 ORTHO05D004953 1.2e-09 67.4 92 42.4
Solyc04g039950.4 Solanum lycopersicum HOM05D000764 ORTHO05D004953 1.2e-09 67.4 89 40.4
Sopen04g010120 Solanum pennellii HOM05D000764 ORTHO05D004953 1.2e-09 67.4 89 40.4
Thecc.05G133300 Theobroma cacao HOM05D000764 ORTHO05D004953 1.2e-09 67.4 94 40.4
FAN25G3812 Fragaria x ananassa HOM05D000764 ORTHO05D004953 1.6e-09 67.0 97 43.3
Ciclev10014014m.g Citrus clementina HOM05D000764 ORTHO05D004953 2.1e-09 66.6 93 39.8
Glyma.18G000100 Glycine max HOM05D000764 ORTHO05D004953 2.1e-09 66.6 90 40.0
Nitab4.5_0003134g0150 Nicotiana tabacum HOM05D000764 ORTHO05D004953 2.7e-09 66.2 89 37.1
Hund07595 Selenicereus undatus HOM05D000764 ORTHO05D004953 2.7e-09 66.2 93 39.8
TWI60G0851 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 2.7e-09 66.2 91 41.8
Haze_22943 Corylus avellana HOM05D000764 ORTHO05D004953 3.6e-09 65.9 121 35.5
Lj6g0018726 Lotus japonicus HOM05D000764 ORTHO05D004953 3.6e-09 65.9 99 40.4
Gohir.A08G227900 Gossypium hirsutum HOM05D000764 ORTHO05D004953 6.1e-09 65.1 90 38.9
Gohir.D08G248200 Gossypium hirsutum HOM05D000764 ORTHO05D004953 6.1e-09 65.1 90 38.9
Gorai.004G264800 Gossypium raimondii HOM05D000764 ORTHO05D004953 6.1e-09 65.1 90 38.9
Lsat_1_v5_gn_6_53100 Lactuca sativa HOM05D000764 ORTHO05D004953 6.1e-09 65.1 90 40.0
Manes.14G121800 Manihot esculenta HOM05D000764 ORTHO05D004953 6.1e-09 65.1 93 40.9
BraA05t20647Z Brassica rapa HOM05D000764 ORTHO05D004953 8.0e-09 64.7 100 39.0
Peaxi162Scf00970g00016 Petunia axillaris HOM05D000764 ORTHO05D004953 8.0e-09 64.7 89 37.1
TWI32G0740 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 8.0e-09 64.7 96 38.5
Nitab4.5_0000799g0100 Nicotiana tabacum HOM05D000764 ORTHO05D004953 1.0e-08 64.3 89 40.4
TPR.G19327 Trifolium pratense HOM05D000764 ORTHO05D004953 1.0e-08 64.3 92 39.1
Atru.chr3.2095 Acer truncatum HOM05D000764 ORTHO05D004953 1.4e-08 63.9 121 32.2
Psat5g101160 Pisum sativum HOM05D000764 ORTHO05D004953 1.4e-08 63.9 92 38.0
Ca_16376_v3 Cicer arietinum L. HOM05D000764 ORTHO05D004953 1.8e-08 63.5 92 35.9
PSO339G2492 Papaver somniferum HOM05D000764 ORTHO05D004953 1.8e-08 63.5 98 40.8
BcaC08g44192 Brassica carinata HOM05D000764 ORTHO05D004953 2.3e-08 63.2 94 40.4
A05p17530 Brassica napus HOM05D000764 ORTHO05D004953 2.3e-08 63.2 94 40.4
C06p15980 Brassica napus HOM05D000764 ORTHO05D004953 2.3e-08 63.2 94 40.4
CiPaw.13G176800 Carya illinoinensis HOM05D000764 ORTHO05D004953 2.3e-08 63.2 93 40.9
Duzib128G0342 Durio zibethinus HOM05D000764 ORTHO05D004953 2.3e-08 63.2 97 39.2
Glyma.11G256800 Glycine max HOM05D000764 ORTHO05D004953 2.3e-08 63.2 93 37.6
Oeu021897.1 Olea europaea HOM05D000764 ORTHO05D004953 2.3e-08 63.2 89 39.3
BolC6t36790H Brassica oleracea HOM05D000764 ORTHO05D004953 3.0e-08 62.8 102 38.2
Nn7g35865 Nelumbo nucifera HOM05D000764 ORTHO05D004953 3.0e-08 62.8 95 38.9
Phvul.001G269300 Phaseolus vulgaris HOM05D000764 ORTHO05D004953 3.0e-08 62.8 90 37.8
Migut.L00381 Erythranthe guttata HOM05D000764 ORTHO05D004953 3.9e-08 62.4 88 39.8
HanXRQChr13g0405791 Helianthus annuus HOM05D000764 ORTHO05D004953 5.2e-08 62.0 89 38.2
Nitab4.5_0005544g0060 Nicotiana tabacum HOM05D000764 ORTHO05D004953 5.2e-08 62.0 86 38.4
VMungo1080G0389 Vigna mungo HOM05D000764 ORTHO05D004953 5.2e-08 62.0 97 38.1
arahy.Tifrunner.gnm1.ann1.W7TQKX Arachis hypogaea HOM05D000764 ORTHO05D004953 6.7e-08 61.6 93 37.6
EL10Ac4g10385 Beta vulgaris HOM05D000764 ORTHO05D004953 6.7e-08 61.6 89 36.0
C06p10270 Brassica napus HOM05D000764 ORTHO05D004953 6.7e-08 61.6 94 39.4
Sc21g0002730 Simmondsia chinensis HOM05D000764 ORTHO05D004953 6.7e-08 61.6 89 37.1
Aqoxy3G01104 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 8.8e-08 61.2 113 33.6
A06p00260 Brassica napus HOM05D000764 ORTHO05D004953 8.8e-08 61.2 94 38.3
Carub.0001s4383 Capsella rubella HOM05D000764 ORTHO05D004953 8.8e-08 61.2 94 39.4
AT1G55325 Arabidopsis thaliana HOM05D000764 ORTHO05D004953 1.1e-07 60.8 94 39.4
arahy.Tifrunner.gnm1.ann1.ML2TY5 Arachis hypogaea HOM05D000764 ORTHO05D004953 1.1e-07 60.8 90 37.8
Medtr3g083500 Medicago truncatula HOM05D000764 ORTHO05D004953 1.1e-07 60.8 89 37.1
THA.LOC104810327 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 1.1e-07 60.8 94 39.4
Thhalv10011178m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 1.5e-07 60.5 94 39.4
AL1G63370 Arabidopsis lyrata HOM05D000764 ORTHO05D004953 2.0e-07 60.1 94 39.4
BraA06t23242Z Brassica rapa HOM05D000764 ORTHO05D004953 2.0e-07 60.1 107 34.6
vmacro06919 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 2.0e-07 60.1 89 39.3
MSTRG.16793 Avicennia marina HOM05D000764 ORTHO05D004953 2.6e-07 59.7 89 38.2
BolC6t36102H Brassica oleracea HOM05D000764 ORTHO05D004953 2.6e-07 59.7 111 36.0
CARHR044980 Cardamine hirsuta HOM05D000764 ORTHO05D004953 2.6e-07 59.7 94 38.3
Lalb_Chr23g0278471 Lupinus albus HOM05D000764 ORTHO05D004953 2.6e-07 59.7 93 37.6
AUR62040904 Chenopodium quinoa HOM05D000764 ORTHO05D004953 3.3e-07 59.3 89 34.8
Aa31LG10G1120 Aethionema arabicum HOM05D000764 ORTHO05D004953 4.4e-07 58.9 90 36.7
ECA233G5672 Erigeron canadensis HOM05D000764 ORTHO05D004953 4.4e-07 58.9 94 37.2
Eucgr.J01768 Eucalyptus grandis HOM05D000764 ORTHO05D004953 5.7e-07 58.5 93 39.8
Rhsim03G0149100 Rhododendron simsii HOM05D000764 ORTHO05D004953 5.7e-07 58.5 89 38.2
AUR62019165 Chenopodium quinoa HOM05D000764 ORTHO05D004953 7.4e-07 58.2 89 33.7
PGR119G0322 Punica granatum HOM05D000764 ORTHO05D004953 7.4e-07 58.2 91 39.6
Sp1g41000 Schrenkiella parvula HOM05D000764 ORTHO05D004953 7.4e-07 58.2 93 37.6
SEGI_19391 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 9.7e-07 57.8 98 32.7
ATR0490G003 Amborella trichopoda HOM05D000764 ORTHO05D004953 2.8e-06 56.2 93 36.6


User provided reference genes

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