Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C030720.2 Cucumis melo HOM05D007667 ORTHO05D008033 1.6e-181 639.4 355 100.0
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 2.6e-147 525.8 359 81.3
ClCG10G016970 Citrullus lanatus HOM05D007667 ORTHO05D008033 3.7e-93 345.9 260 76.5
Sed0023543 Sechium edule HOM05D007667 ORTHO05D008033 1.6e-56 224.2 359 49.0
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 1.3e-24 118.2 379 31.9
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 3.6e-24 116.7 281 36.3
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 6.2e-24 115.9 410 31.5
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 6.2e-24 115.9 384 31.8
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 1.8e-23 114.4 388 32.5
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 1.8e-23 114.4 382 33.5
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 3.1e-23 113.6 388 32.5
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 4.0e-23 113.2 364 30.2
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 4.0e-23 113.2 382 31.7
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 3.4e-22 110.2 268 35.8
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 3.4e-22 110.2 257 35.8
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 7.6e-22 109.0 380 30.3
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 9.9e-22 108.6 379 30.1
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 1.3e-21 108.2 374 29.9
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 1.7e-21 107.8 238 35.7
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 2.2e-21 107.5 252 35.3
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 4.9e-21 106.3 388 32.0
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 4.9e-21 106.3 377 30.8
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 1.9e-20 104.4 398 29.1
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 3.5e-19 100.1 388 29.6
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 6.0e-19 99.4 263 33.8
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 1.0e-18 98.6 377 29.2
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 2.3e-18 97.4 387 28.7
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 2.3e-18 97.4 287 31.4
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 4.3e-17 93.2 230 33.0
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 5.6e-17 92.8 296 31.4
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 7.3e-17 92.4 421 28.5
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 2.1e-16 90.9 241 31.5
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 3.6e-16 90.1 256 30.9
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 6.2e-16 89.4 137 43.1
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 3.1e-15 87.0 240 34.2
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 5.3e-15 86.3 243 31.3
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 1.5e-14 84.7 313 30.4
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 2.0e-14 84.3 428 27.1
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 3.4e-14 83.6 415 26.5
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 4.5e-14 83.2 68 61.8
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 5.8e-14 82.8 273 31.5
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 9.9e-14 82.0 250 30.0
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 2.2e-13 80.9 393 28.0
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 2.9e-13 80.5 431 27.4
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 2.9e-13 80.5 269 29.7
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 2.9e-13 80.5 260 26.9
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 3.8e-13 80.1 135 40.7
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 4.9e-13 79.7 289 28.4
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 6.4e-13 79.3 258 31.4
PGSC0003DMG400029088 Solanum tuberosum HOM05D007667 ORTHO05D008033 1.4e-12 78.2 247 28.3
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 9.3e-12 75.5 376 25.3
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 9.3e-12 75.5 383 27.7
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 1.6e-11 74.7 463 24.6
Lalb_Chr22g0358161 Lupinus albus HOM05D007667 ORTHO05D008033 2.1e-11 74.3 86 51.2
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 2.7e-11 73.9 412 26.5
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 1.0e-10 72.0 247 29.6
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 1.8e-10 71.2 356 27.0
MELO3C019169.2 Cucumis melo HOM05D007667 ORTHO05D008033 3.0e-10 70.5 124 39.5
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 5.1e-10 69.7 273 28.6
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 1.1e-09 68.6 238 27.3
Solyc08g067000.3 Solanum lycopersicum HOM05D007667 ORTHO05D008033 1.5e-09 68.2 247 27.5
Actinidia37860 Actinidia chinensis HOM05D007667 ORTHO05D008033 3.3e-09 67.0 74 51.4
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 4.8e-08 63.2 277 28.9
AUR62020980 Chenopodium quinoa HOM05D007667 ORTHO05D008033 6.2e-08 62.8 143 38.5
Sp5g05780 Schrenkiella parvula HOM05D009749 ORTHO05D008033 4.0e-07 60.1 271 24.0
MBI13_g08646_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 5.3e-07 59.7 68 45.6
Sopen08g020950 Solanum pennellii HOM05D007667 ORTHO05D008033 5.3e-07 59.7 238 26.1
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 1.2e-06 58.5 247 25.9
EL10Ac3g07362 Beta vulgaris HOM05D007667 ORTHO05D008033 1.2e-06 58.5 225 28.0
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 2.0e-06 57.8 270 22.6
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 2.0e-06 57.8 270 22.6
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 5.8e-06 56.2 212 26.4
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 7.6e-06 55.8 68 39.7


User provided reference genes

Program Settings