Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C030714.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.4e-132 476.5 274 100.0
MELO3C030897.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.6e-75 285.4 285 60.4
MELO3C032092.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.6e-64 249.2 280 52.9
MELO3C029648.2 Cucumis melo HOM05D007209 ORTHO05D000921 6.8e-63 245.0 161 90.1
MELO3C031338.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.6e-62 243.0 161 88.2
MELO3C028998.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.6e-56 222.6 239 54.4
MELO3C034280.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.4e-54 216.1 166 68.1
MELO3C030185.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.2e-52 209.1 270 49.3
MELO3C035039.2 Cucumis melo HOM05D007209 ORTHO05D000921 5.4e-52 208.8 259 50.2
MELO3C033912.2 Cucumis melo HOM05D007209 ORTHO05D000921 9.3e-52 208.0 161 83.2
MELO3C035563.2 Cucumis melo HOM05D007209 ORTHO05D000921 9.3e-52 208.0 169 66.3
MELO3C034962.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.1e-47 194.5 219 54.3
MELO3C030181.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.0e-46 190.3 157 65.0
ClCG07G007780 Citrullus lanatus HOM05D007209 ORTHO05D000921 7.6e-46 188.3 240 50.0
ClCG03G008640 Citrullus lanatus HOM05D007209 ORTHO05D000921 6.4e-45 185.3 198 53.0
ClCG03G011480 Citrullus lanatus HOM05D007209 ORTHO05D000921 3.7e-40 169.5 165 55.8
MELO3C034270.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.7e-35 153.3 106 72.6
MELO3C032620.2 Cucumis melo HOM05D007209 ORTHO05D000285 8.7e-34 148.3 162 54.3
MELO3C035609.2 Cucumis melo HOM05D007209 ORTHO05D000921 8.2e-32 141.7 79 86.1
ClCG09G017130 Citrullus lanatus HOM05D007209 ORTHO05D000921 5.5e-28 129.0 92 71.7
MELO3C032288.2 Cucumis melo HOM05D007209 ORTHO05D000921 7.1e-28 128.6 119 63.0
MELO3C009866.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.5e-27 126.3 172 43.6
ClCG10G015090 Citrullus lanatus HOM05D007209 ORTHO05D000921 4.6e-27 125.9 170 43.5
CsaV3_3G041440 Cucumis sativus L. HOM05D007209 ORTHO05D000921 1.8e-26 124.0 171 42.1
MELO3C030265.2 Cucumis melo HOM05D007209 ORTHO05D000921 7.4e-25 118.6 258 36.4
Sed0003641 Sechium edule HOM05D000034 ORTHO05D000037 4.1e-23 112.8 82 63.4
Sed0011521 Sechium edule HOM05D007209 ORTHO05D000921 9.0e-23 111.7 170 40.0
MELO3C029808.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.5e-22 109.4 97 58.8
Hma1.2p1_0805F.1_g221293 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 2.9e-21 106.7 171 36.8
Hma1.2p1_0805F.1_g221299 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 2.9e-21 106.7 171 36.8
MELO3C033464.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.8e-21 106.3 120 50.8
Rhsim03G0151700 Rhododendron simsii HOM05D000114 ORTHO05D000037 1.1e-20 104.8 170 47.1
Dinv32776 Davidia involucrata HOM05D007209 ORTHO05D000921 7.9e-19 98.6 180 35.6
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.0e-18 96.7 157 34.4
Dinv20825 Davidia involucrata HOM05D007209 ORTHO05D000921 5.1e-18 95.9 180 34.4
Rhsim03G0129100 Rhododendron simsii HOM05D007209 ORTHO05D000921 5.1e-18 95.9 156 36.5
AUR62040593 Chenopodium quinoa HOM05D007209 ORTHO05D000921 7.4e-17 92.0 167 37.7
AUR62037953 Chenopodium quinoa HOM05D007209 ORTHO05D000921 2.2e-16 90.5 163 36.8
Hma1.2p1_0309F.1_g120595 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 2.2e-16 90.5 170 34.1
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 1.4e-15 87.8 186 32.8
vmacro05171 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 1.8e-15 87.4 187 34.8
MELO3C031404.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.1e-15 86.3 45 88.9
Lj1g0016199 Lotus japonicus HOM05D007209 ORTHO05D000921 4.1e-15 86.3 158 33.5
Lj2g0013227 Lotus japonicus HOM05D007209 ORTHO05D000921 6.9e-15 85.5 160 38.8
TAR599G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 6.9e-15 85.5 165 33.3
LjContig00141g0014815 Lotus japonicus HOM05D007209 ORTHO05D000921 1.2e-14 84.7 160 38.8
Sed0016419 Sechium edule HOM05D007209 ORTHO05D000921 1.5e-14 84.3 164 35.4
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 2.6e-14 83.6 165 32.7
Rhsim04G0134000 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.4e-14 83.2 248 29.4
Sed0024451 Sechium edule HOM05D007209 ORTHO05D000921 7.7e-14 82.0 149 33.6
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 1.3e-13 81.3 170 34.7
MELO3C032294.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.2e-13 80.5 52 76.9
CANSAT25G0660 Cannabis sativa HOM05D000665 ORTHO05D000921 2.9e-13 80.1 171 35.1
MELO3C035128.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.9e-13 80.1 49 73.5
AUR62042144 Chenopodium quinoa HOM05D007209 ORTHO05D000921 1.1e-12 78.2 163 30.7
COL.COLO4_25265 Corchorus olitorius HOM05D007209 ORTHO05D000921 1.4e-12 77.8 187 32.6
COL.COLO4_05628 Corchorus olitorius HOM05D007209 ORTHO05D000921 1.6e-11 74.3 182 30.2
Actinidia24178 Actinidia chinensis HOM05D013777 ORTHO05D000921 2.7e-11 73.6 173 30.6
COL.COLO4_20107 Corchorus olitorius HOM05D007209 ORTHO05D000921 3.0e-10 70.1 183 33.3
Rhsim12G0122900 Rhododendron simsii HOM05D000034 ORTHO05D000037 5.1e-10 69.3 248 28.2
Dinv11893 Davidia involucrata HOM05D007209 ORTHO05D000921 1.1e-09 68.2 175 29.1
MELO3C032195.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.5e-09 67.8 50 66.0
vmacro19172 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 2.6e-09 67.0 157 40.1
ClCG10G005970 Citrullus lanatus HOM05D007209 ORTHO05D000921 3.3e-09 66.6 41 78.0
CANSAT21G1611 Cannabis sativa HOM05D007209 ORTHO05D000921 4.4e-09 66.2 158 31.0
Dinv17018 Davidia involucrata HOM05D007209 ORTHO05D000921 4.4e-09 66.2 186 28.0
Dinv42302 Davidia involucrata HOM05D007209 ORTHO05D000921 4.4e-09 66.2 175 28.6
Dinv42966 Davidia involucrata HOM05D007209 ORTHO05D000921 4.4e-09 66.2 186 28.0
Dinv43133 Davidia involucrata HOM05D007209 ORTHO05D000921 4.4e-09 66.2 186 28.0
vmacro18043 Vaccinium macrocarpon HOM05D007209 ORTHO05D000005 4.4e-09 66.2 94 38.3
Dinv01169 Davidia involucrata HOM05D007209 ORTHO05D000921 5.7e-09 65.9 167 30.5
Rhsim01G0206000 Rhododendron simsii HOM05D007209 ORTHO05D000921 5.7e-09 65.9 101 33.7
MD17G1072500 Malus domestica HOM05D000005 ORTHO05D000012 7.4e-09 65.5 71 49.3
MELO3C029984.2 Cucumis melo HOM05D004229 ORTHO05D025211 9.7e-09 65.1 125 39.2
COL.COLO4_33426 Corchorus olitorius HOM05D007209 ORTHO05D000921 1.3e-08 64.7 182 29.1
Dinv07047 Davidia involucrata HOM05D000003 ORTHO05D000007 1.3e-08 64.7 186 27.4
RcHm_v2.0_Chr1g0346821 Rosa chinensis HOM05D009879 ORTHO05D009647 1.7e-08 64.3 80 41.2
RcHm_v2.0_Chr1g0346841 Rosa chinensis HOM05D009879 ORTHO05D009647 1.7e-08 64.3 80 41.2
COL.COLO4_24640 Corchorus olitorius HOM05D007209 ORTHO05D000921 2.2e-08 63.9 145 35.2
Dinv05467 Davidia involucrata HOM05D007209 ORTHO05D000921 2.8e-08 63.5 156 31.4
Actinidia05403 Actinidia chinensis HOM05D013777 ORTHO05D000921 3.7e-08 63.2 169 29.0
Dinv29901 Davidia involucrata HOM05D007209 ORTHO05D000921 3.7e-08 63.2 170 27.6
Dinv36419 Davidia involucrata HOM05D007209 ORTHO05D000921 3.7e-08 63.2 180 32.2
FAN03G0178 Fragaria x ananassa HOM05D009879 ORTHO05D009647 4.8e-08 62.8 80 37.5
FAN10G0934 Fragaria x ananassa HOM05D000005 ORTHO05D000012 4.8e-08 62.8 80 37.5
Rhsim08G0139300 Rhododendron simsii HOM05D000251 ORTHO05D007889 4.8e-08 62.8 97 38.1
CSS0009073 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 8.2e-08 62.0 192 37.0
Dinv02799 Davidia involucrata HOM05D000665 ORTHO05D000921 1.1e-07 61.6 164 29.3
Dinv11546 Davidia involucrata HOM05D007209 ORTHO05D000921 1.1e-07 61.6 175 28.0
Dinv44163 Davidia involucrata HOM05D007209 ORTHO05D000921 1.1e-07 61.6 45 60.0
Dinv27628 Davidia involucrata HOM05D007209 ORTHO05D000921 1.4e-07 61.2 100 35.0
Dinv43770 Davidia involucrata HOM05D000665 ORTHO05D000921 1.4e-07 61.2 45 60.0
Glyma.15G120200 Glycine max HOM05D007209 ORTHO05D000921 1.4e-07 61.2 204 27.9
Dinv13268 Davidia involucrata HOM05D000097 ORTHO05D000041 1.8e-07 60.8 201 25.9
Sed0007988 Sechium edule HOM05D007209 ORTHO05D000921 1.8e-07 60.8 148 31.1
Dinv39109 Davidia involucrata HOM05D000665 ORTHO05D000921 2.4e-07 60.5 45 60.0
Rhsim08G0112700 Rhododendron simsii HOM05D007209 ORTHO05D000921 3.1e-07 60.1 91 39.6
FvH4_7g09790 Fragaria vesca HOM05D009879 ORTHO05D009647 5.3e-07 59.3 79 35.4
CANSAT80G2513 Cannabis sativa HOM05D000034 ORTHO05D000037 6.9e-07 58.9 38 76.3
Dinv03607 Davidia involucrata HOM05D000665 ORTHO05D000921 9.1e-07 58.5 46 54.3
Dinv15874 Davidia involucrata HOM05D000665 ORTHO05D000921 1.5e-06 57.8 164 27.4
FvH4_7g11550 Fragaria vesca HOM05D000005 ORTHO05D015660 1.5e-06 57.8 80 36.2
EL10Ac6g14408 Beta vulgaris HOM05D007209 ORTHO05D000921 2.6e-06 57.0 78 38.5
AUR62024947 Chenopodium quinoa HOM05D007209 ORTHO05D000921 2.6e-06 57.0 96 35.4
Dinv31500 Davidia involucrata HOM05D007209 ORTHO05D000921 5.9e-06 55.8 45 55.6


User provided reference genes

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