Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C030585.2 Cucumis melo HOM05D006401 ORTHO05D007864 5.3e-14 79.7 38 100.0
MELO3C009013.2 Cucumis melo HOM05D006401 ORTHO05D007864 4.6e-10 66.6 35 85.7
CsaV3_1G004580 Cucumis sativus L. HOM05D006401 ORTHO05D007864 7.4e-08 59.3 32 81.2
ClCG06G014090 Citrullus lanatus HOM05D006401 ORTHO05D007864 1.3e-07 58.5 32 78.1
Oeu021025.1 Olea europaea HOM05D006401 ORTHO05D007864 2.1e-07 57.8 34 73.5
VMungo0251G1477 Vigna mungo HOM05D006401 ORTHO05D007864 2.1e-07 57.8 37 70.3
Cpa.g.sc115.22 Carica papaya HOM05D006401 ORTHO05D007864 6.2e-07 56.2 31 80.6
Lju50A23T28 Lonicera japonica HOM05D006401 ORTHO05D007864 6.2e-07 56.2 35 68.6
CAN.G146.3 Capsicum annuum HOM05D006401 ORTHO05D007864 8.2e-07 55.8 33 75.8
Ciclev10008288m.g Citrus clementina HOM05D006401 ORTHO05D007864 8.2e-07 55.8 32 75.0
arahy.Tifrunner.gnm1.ann1.IH6H8X Arachis hypogaea HOM05D006401 ORTHO05D007864 1.4e-06 55.1 32 78.1
DCAR_010674 Daucus carota HOM05D006401 ORTHO05D007864 1.4e-06 55.1 32 78.1
arahy.Tifrunner.gnm1.ann1.Y2X24R Arachis hypogaea HOM05D006401 ORTHO05D007864 1.8e-06 54.7 32 75.0
CANSAT80G2545 Cannabis sativa HOM05D006401 ORTHO05D007864 1.8e-06 54.7 32 75.0
PSO063G4133 Papaver somniferum HOM05D006401 ORTHO05D007864 1.8e-06 54.7 31 80.6
PSO170G1271 Papaver somniferum HOM05D006401 ORTHO05D007864 1.8e-06 54.7 31 80.6
QL11p008681 Quercus lobata HOM05D006401 ORTHO05D007864 1.8e-06 54.7 32 81.2
Sed0005150 Sechium edule HOM05D006401 ORTHO05D007864 1.8e-06 54.7 31 74.2
CDE05G1402 Ceratophyllum demersum HOM05D000163 ORTHO05D007864 3.1e-06 53.9 32 78.1
Os06g0663100 Oryza sativa ssp. japonica HOM05D006401 ORTHO05D007864 3.1e-06 53.9 32 75.0
Phvul.002G302500 Phaseolus vulgaris HOM05D006401 ORTHO05D007864 3.1e-06 53.9 32 75.0
Psat7g020960 Pisum sativum HOM05D006401 ORTHO05D007864 3.1e-06 53.9 32 75.0
Glyma.08G027300 Glycine max HOM05D006401 ORTHO05D007864 4.0e-06 53.5 32 71.9
MELO3C017384.2 Cucumis melo HOM05D006401 ORTHO05D007864 5.3e-06 53.1 28 85.7
PGSC0003DMG401009562 Solanum tuberosum HOM05D006401 ORTHO05D007864 5.3e-06 53.1 35 68.6
TAR626G0078 Trochodendron aralioides HOM05D006401 ORTHO05D007864 5.3e-06 53.1 31 77.4
Medtr8g101250 Medicago truncatula HOM05D006401 ORTHO05D007864 6.9e-06 52.8 32 71.9
Nitab4.5_0008632g0020 Nicotiana tabacum HOM05D006401 ORTHO05D007864 6.9e-06 52.8 32 75.0
PGR044G1973 Punica granatum HOM05D006401 ORTHO05D007864 6.9e-06 52.8 32 71.9
Solyc07g017260.2 Solanum lycopersicum HOM05D006401 ORTHO05D007864 6.9e-06 52.8 35 68.6
CiPaw.16G104000 Carya illinoinensis HOM05D006401 ORTHO05D007864 9.0e-06 52.4 32 78.1


User provided reference genes

Program Settings