Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C030425.2 Cucumis melo HOM05D000158 ORTHO05D015087 5.3e-62 240.7 113 100.0
MELO3C022767.2 Cucumis melo HOM05D000158 ORTHO05D015087 1.7e-47 192.6 112 78.6
MELO3C013380.2 Cucumis melo HOM05D000158 ORTHO05D015087 6.3e-47 190.7 110 80.0
MELO3C028612.2 Cucumis melo HOM05D000158 ORTHO05D015087 8.2e-47 190.3 110 80.9
MELO3C032329.2 Cucumis melo HOM05D000158 ORTHO05D015087 1.6e-45 186.0 110 77.3
MELO3C034296.2 Cucumis melo HOM05D000158 ORTHO05D015087 1.5e-43 179.5 104 81.7
MELO3C030509.2 Cucumis melo HOM05D000158 ORTHO05D015087 2.0e-40 169.1 104 76.9
MELO3C008564.2 Cucumis melo HOM05D000158 ORTHO05D015087 1.0e-36 156.8 87 82.8
MELO3C031980.2 Cucumis melo HOM05D000158 ORTHO05D015087 1.7e-36 156.0 86 80.2
MELO3C026718.2 Cucumis melo HOM05D000158 ORTHO05D015087 5.7e-24 114.4 115 50.4
MELO3C004850.2 Cucumis melo HOM05D000158 ORTHO05D000197 9.8e-24 113.6 117 48.7
MELO3C027490.2 Cucumis melo HOM05D000158 ORTHO05D000197 2.2e-23 112.5 117 47.9
MELO3C030587.2 Cucumis melo HOM05D000158 ORTHO05D015087 2.9e-23 112.1 114 50.0
MELO3C002890.2 Cucumis melo HOM05D000158 ORTHO05D000197 6.4e-23 110.9 117 48.7
ClCG03G013730 Citrullus lanatus HOM05D000158 ORTHO05D000002 1.4e-22 109.8 111 49.5
ClCG10G003450 Citrullus lanatus HOM05D000158 ORTHO05D000002 2.0e-21 105.9 111 48.6
MELO3C026406.2 Cucumis melo HOM05D000158 ORTHO05D000197 1.9e-14 82.8 85 49.4
MELO3C029784.2 Cucumis melo HOM05D000158 ORTHO05D015087 1.2e-13 80.1 44 81.8
MELO3C003851.2 Cucumis melo HOM05D000158 ORTHO05D000197 2.0e-13 79.3 77 46.8
MELO3C034115.2 Cucumis melo HOM05D000158 ORTHO05D015087 3.9e-12 75.1 44 79.5
Glyma.18G122400 Glycine max HOM05D000158 ORTHO05D000197 2.1e-10 69.3 116 38.8
CiPaw.03G092700 Carya illinoinensis HOM05D000158 ORTHO05D002858 2.8e-10 68.9 91 39.6
Glyma.14G146500 Glycine max HOM05D000158 ORTHO05D000197 2.8e-10 68.9 110 38.2
Glyma.15G177300 Glycine max HOM05D000158 ORTHO05D000197 2.8e-10 68.9 110 38.2
Glyma.19G068000 Glycine max HOM05D000158 ORTHO05D000197 2.8e-10 68.9 110 38.2
Glyma.20G037200 Glycine max HOM05D000158 ORTHO05D000197 6.2e-10 67.8 110 35.5
Glyma.20G060800 Glycine max HOM05D000158 ORTHO05D000197 6.2e-10 67.8 110 36.4
Glyma.03G079900 Glycine max HOM05D000158 ORTHO05D000197 1.8e-09 66.2 112 34.8
CiPaw.08G029600 Carya illinoinensis HOM05D000158 ORTHO05D000197 4.0e-09 65.1 117 33.3
Glyma.18G150700 Glycine max HOM05D000158 ORTHO05D000197 4.0e-09 65.1 110 37.3
Glyma.15G210800 Glycine max HOM05D000158 ORTHO05D000197 5.2e-09 64.7 110 37.3
arahy.Tifrunner.gnm1.ann1.YN5V9H Arachis hypogaea HOM05D000158 ORTHO05D000197 6.8e-09 64.3 112 31.2
Ah.04g160570 Amaranthus hybridus HOM05D000158 ORTHO05D000197 1.2e-08 63.5 91 34.1
arahy.Tifrunner.gnm1.ann1.217P67 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.5e-08 63.2 85 35.3
Sopen12g012220 Solanum pennellii HOM05D000158 ORTHO05D000197 1.5e-08 63.2 100 32.0
arahy.Tifrunner.gnm1.ann1.97NBY2 Arachis hypogaea HOM05D000158 ORTHO05D000197 4.4e-08 61.6 88 35.2
CiPaw.01G104600 Carya illinoinensis HOM05D000158 ORTHO05D000197 4.4e-08 61.6 91 35.2
ClCG10G007270 Citrullus lanatus HOM05D000158 ORTHO05D000197 5.8e-08 61.2 100 35.0
arahy.Tifrunner.gnm1.ann1.ASBC4P Arachis hypogaea HOM05D000158 ORTHO05D000197 7.5e-08 60.8 89 36.0
Hund12297 Selenicereus undatus HOM05D000158 ORTHO05D002662 1.3e-07 60.1 88 36.4
arahy.Tifrunner.gnm1.ann1.ZMN0FL Arachis hypogaea HOM05D000158 ORTHO05D000197 2.2e-07 59.3 113 31.0
TPR.G22094 Trifolium pratense HOM05D000158 ORTHO05D000197 2.2e-07 59.3 88 37.5
Lj5g0006538 Lotus japonicus HOM05D000158 ORTHO05D000197 2.9e-07 58.9 109 33.9
arahy.Tifrunner.gnm1.ann1.18PYUZ Arachis hypogaea HOM05D000158 ORTHO05D000197 4.9e-07 58.2 113 31.0
arahy.Tifrunner.gnm1.ann1.558G8J Arachis hypogaea HOM05D000158 ORTHO05D000197 4.9e-07 58.2 113 31.0
arahy.Tifrunner.gnm1.ann1.9F14AA Arachis hypogaea HOM05D000158 ORTHO05D000197 4.9e-07 58.2 112 31.2
arahy.Tifrunner.gnm1.ann1.I3DMP8 Arachis hypogaea HOM05D000158 ORTHO05D003614 4.9e-07 58.2 113 31.0
arahy.Tifrunner.gnm1.ann1.RZIJ2L Arachis hypogaea HOM05D000158 ORTHO05D000197 4.9e-07 58.2 113 31.0
arahy.Tifrunner.gnm1.ann1.W04P42 Arachis hypogaea HOM05D000158 ORTHO05D000197 4.9e-07 58.2 113 31.0
CiPaw.04G053800 Carya illinoinensis HOM05D000158 ORTHO05D000197 4.9e-07 58.2 90 33.3
Lj1g0013168 Lotus japonicus HOM05D000158 ORTHO05D000197 4.9e-07 58.2 110 33.6
Atru.chr1.207 Acer truncatum HOM05D000158 ORTHO05D000197 6.4e-07 57.8 88 31.8
arahy.Tifrunner.gnm1.ann1.6U09DB Arachis hypogaea HOM05D000158 ORTHO05D000197 6.4e-07 57.8 113 31.0
arahy.Tifrunner.gnm1.ann1.7I5EIZ Arachis hypogaea HOM05D000158 ORTHO05D000197 6.4e-07 57.8 113 31.0
arahy.Tifrunner.gnm1.ann1.FHI9NT Arachis hypogaea HOM05D000158 ORTHO05D000197 6.4e-07 57.8 113 31.0
arahy.Tifrunner.gnm1.ann1.HTN0Y5 Arachis hypogaea HOM05D000158 ORTHO05D000197 6.4e-07 57.8 113 31.0
arahy.Tifrunner.gnm1.ann1.IW28EF Arachis hypogaea HOM05D000158 ORTHO05D000197 6.4e-07 57.8 113 31.0
arahy.Tifrunner.gnm1.ann1.JCQ008 Arachis hypogaea HOM05D000158 ORTHO05D000197 6.4e-07 57.8 113 31.0
arahy.Tifrunner.gnm1.ann1.QGF57N Arachis hypogaea HOM05D000158 ORTHO05D000197 6.4e-07 57.8 113 31.0
arahy.Tifrunner.gnm1.ann1.V0BAMU Arachis hypogaea HOM05D000158 ORTHO05D000197 6.4e-07 57.8 113 31.0
arahy.Tifrunner.gnm1.ann1.ZIM2T0 Arachis hypogaea HOM05D000158 ORTHO05D000197 6.4e-07 57.8 109 33.0
Lj6g0015358 Lotus japonicus HOM05D000158 ORTHO05D000197 6.4e-07 57.8 112 32.1
arahy.Tifrunner.gnm1.ann1.M3KMZQ Arachis hypogaea HOM05D000158 ORTHO05D000197 8.3e-07 57.4 113 30.1
arahy.Tifrunner.gnm1.ann1.N3555V Arachis hypogaea HOM05D000158 ORTHO05D000197 8.3e-07 57.4 113 30.1
arahy.Tifrunner.gnm1.ann1.N7R8CX Arachis hypogaea HOM05D000158 ORTHO05D000197 8.3e-07 57.4 112 31.2
arahy.Tifrunner.gnm1.ann1.SEYZ0I Arachis hypogaea HOM05D000158 ORTHO05D000197 8.3e-07 57.4 113 30.1
Lj2g0018729 Lotus japonicus HOM05D000158 ORTHO05D000197 8.3e-07 57.4 109 33.0
Sopen01g014030 Solanum pennellii HOM05D000158 ORTHO05D000197 8.3e-07 57.4 88 35.2
arahy.Tifrunner.gnm1.ann1.1P3WRE Arachis hypogaea HOM05D000158 ORTHO05D000197 1.1e-06 57.0 88 34.1
arahy.Tifrunner.gnm1.ann1.756TEX Arachis hypogaea HOM05D000158 ORTHO05D000197 1.1e-06 57.0 113 30.1
arahy.Tifrunner.gnm1.ann1.9Y4FQ2 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.1e-06 57.0 113 30.1
arahy.Tifrunner.gnm1.ann1.A109Z1 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.1e-06 57.0 85 31.8
arahy.Tifrunner.gnm1.ann1.HEVL9E Arachis hypogaea HOM05D000158 ORTHO05D000197 1.1e-06 57.0 113 31.0
arahy.Tifrunner.gnm1.ann1.I7E4L8 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.1e-06 57.0 113 30.1
arahy.Tifrunner.gnm1.ann1.J01ZYU Arachis hypogaea HOM05D000158 ORTHO05D000197 1.1e-06 57.0 113 30.1
arahy.Tifrunner.gnm1.ann1.JP535L Arachis hypogaea HOM05D000158 ORTHO05D000197 1.1e-06 57.0 113 30.1
arahy.Tifrunner.gnm1.ann1.M2MFDB Arachis hypogaea HOM05D000158 ORTHO05D000197 1.1e-06 57.0 109 32.1
Thhalv10009827m.g Eutrema salsugineum HOM05D000158 ORTHO05D000197 1.1e-06 57.0 88 35.2
arahy.Tifrunner.gnm1.ann1.1RY5L5 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.4e-06 56.6 113 30.1
arahy.Tifrunner.gnm1.ann1.A5BTLM Arachis hypogaea HOM05D000158 ORTHO05D000197 1.4e-06 56.6 113 30.1
arahy.Tifrunner.gnm1.ann1.BYA8HJ Arachis hypogaea HOM05D000158 ORTHO05D000197 1.4e-06 56.6 113 30.1
arahy.Tifrunner.gnm1.ann1.CVS9SJ Arachis hypogaea HOM05D000158 ORTHO05D000197 1.4e-06 56.6 113 30.1
arahy.Tifrunner.gnm1.ann1.GCX1C5 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.4e-06 56.6 113 30.1
arahy.Tifrunner.gnm1.ann1.GD7WFM Arachis hypogaea HOM05D000158 ORTHO05D000197 1.4e-06 56.6 113 30.1
arahy.Tifrunner.gnm1.ann1.Q72NH6 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.4e-06 56.6 113 30.1
arahy.Tifrunner.gnm1.ann1.S1Q5XH Arachis hypogaea HOM05D000158 ORTHO05D000197 1.4e-06 56.6 113 30.1
arahy.Tifrunner.gnm1.ann1.ZZQG32 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.4e-06 56.6 113 30.1
Lj3g0020463 Lotus japonicus HOM05D000158 ORTHO05D000197 1.4e-06 56.6 109 33.0
Lj6g0014333 Lotus japonicus HOM05D000158 ORTHO05D000197 1.4e-06 56.6 109 33.0
LjContig00506g0000245 Lotus japonicus HOM05D000158 ORTHO05D000197 1.4e-06 56.6 109 33.0
arahy.Tifrunner.gnm1.ann1.1Y1G78 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.9e-06 56.2 113 29.2
arahy.Tifrunner.gnm1.ann1.96HYEI Arachis hypogaea HOM05D000158 ORTHO05D000197 1.9e-06 56.2 113 29.2
arahy.Tifrunner.gnm1.ann1.IUXR99 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.9e-06 56.2 88 33.0
Lj5g0012305 Lotus japonicus HOM05D000158 ORTHO05D000197 1.9e-06 56.2 109 33.0
arahy.Tifrunner.gnm1.ann1.8UCL89 Arachis hypogaea HOM05D000158 ORTHO05D000197 2.4e-06 55.8 89 32.6
arahy.Tifrunner.gnm1.ann1.PC7CW8 Arachis hypogaea HOM05D000158 ORTHO05D000197 2.4e-06 55.8 86 33.7
Lj1g0002293 Lotus japonicus HOM05D000158 ORTHO05D000197 2.4e-06 55.8 102 34.3
arahy.Tifrunner.gnm1.ann1.39JP8F Arachis hypogaea HOM05D000158 ORTHO05D000197 3.2e-06 55.5 88 33.0
arahy.Tifrunner.gnm1.ann1.BYBE5B Arachis hypogaea HOM05D000158 ORTHO05D000197 3.2e-06 55.5 88 33.0
arahy.Tifrunner.gnm1.ann1.DQ3ZQE Arachis hypogaea HOM05D000158 ORTHO05D000197 3.2e-06 55.5 88 33.0
arahy.Tifrunner.gnm1.ann1.M97NZA Arachis hypogaea HOM05D000158 ORTHO05D000197 3.2e-06 55.5 88 33.0
arahy.Tifrunner.gnm1.ann1.XN6NS8 Arachis hypogaea HOM05D000158 ORTHO05D000197 3.2e-06 55.5 88 33.0
MELO3C028716.2 Cucumis melo HOM05D000158 ORTHO05D000197 3.2e-06 55.5 27 85.2
Sopen09g014910 Solanum pennellii HOM05D000158 ORTHO05D000197 3.2e-06 55.5 90 34.4
arahy.Tifrunner.gnm1.ann1.CIR6XW Arachis hypogaea HOM05D000158 ORTHO05D003614 4.1e-06 55.1 88 33.0
arahy.Tifrunner.gnm1.ann1.TA1UNZ Arachis hypogaea HOM05D000158 ORTHO05D000197 4.1e-06 55.1 88 33.0
arahy.Tifrunner.gnm1.ann1.W4MS58 Arachis hypogaea HOM05D000158 ORTHO05D000197 4.1e-06 55.1 113 30.1
arahy.Tifrunner.gnm1.ann1.YL2BBV Arachis hypogaea HOM05D000158 ORTHO05D000197 4.1e-06 55.1 112 29.5
arahy.Tifrunner.gnm1.ann1.CX12M5 Arachis hypogaea HOM05D000158 ORTHO05D000197 5.4e-06 54.7 88 33.0
arahy.Tifrunner.gnm1.ann1.IM0SRD Arachis hypogaea HOM05D000158 ORTHO05D000197 5.4e-06 54.7 88 31.8
arahy.Tifrunner.gnm1.ann1.UC4KU4 Arachis hypogaea HOM05D000158 ORTHO05D000197 5.4e-06 54.7 119 27.7
arahy.Tifrunner.gnm1.ann1.WI178G Arachis hypogaea HOM05D000158 ORTHO05D000197 5.4e-06 54.7 88 31.8
CAN.G362.35 Capsicum annuum HOM05D000158 ORTHO05D000197 5.4e-06 54.7 68 38.2
Manes.17G002683 Manihot esculenta HOM05D000158 ORTHO05D000197 5.4e-06 54.7 103 31.1
arahy.Tifrunner.gnm1.ann1.4EM99Z Arachis hypogaea HOM05D000158 ORTHO05D000197 7.1e-06 54.3 87 33.3
arahy.Tifrunner.gnm1.ann1.7A5GZE Arachis hypogaea HOM05D000158 ORTHO05D000197 7.1e-06 54.3 113 29.2
arahy.Tifrunner.gnm1.ann1.I0MGU7 Arachis hypogaea HOM05D000158 ORTHO05D000197 7.1e-06 54.3 82 32.9
arahy.Tifrunner.gnm1.ann1.KY4VPW Arachis hypogaea HOM05D000158 ORTHO05D000197 7.1e-06 54.3 113 29.2
Lj1g0015392 Lotus japonicus HOM05D000158 ORTHO05D000197 7.1e-06 54.3 109 33.0
Lj3g0024906 Lotus japonicus HOM05D000158 ORTHO05D000197 7.1e-06 54.3 91 36.3
Lj4g0013407 Lotus japonicus HOM05D000158 ORTHO05D000197 7.1e-06 54.3 91 36.3
Hund20235 Selenicereus undatus HOM05D000158 ORTHO05D000197 7.1e-06 54.3 88 34.1
arahy.Tifrunner.gnm1.ann1.D940DF Arachis hypogaea HOM05D000158 ORTHO05D000197 9.2e-06 53.9 85 31.8
arahy.Tifrunner.gnm1.ann1.I3V9I7 Arachis hypogaea HOM05D000158 ORTHO05D000197 9.2e-06 53.9 88 31.8


User provided reference genes

Program Settings