Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C030294.2 Cucumis melo HOM05D008117 ORTHO05D010265 5.2e-96 354.4 178 100.0
ClCG08G010860 Citrullus lanatus HOM05D008117 ORTHO05D010265 1.1e-45 187.2 121 80.2
CsaV3_6G035660 Cucumis sativus L. HOM05D008117 ORTHO05D010265 5.1e-35 151.8 79 97.5
Sed0012248 Sechium edule HOM05D008117 ORTHO05D010265 3.9e-27 125.6 77 81.8
CiPaw.05G230200 Carya illinoinensis HOM05D008117 ORTHO05D010265 4.1e-24 115.5 82 73.2
Sabra02G0071000 Salix brachista HOM05D008117 ORTHO05D010265 4.5e-23 112.1 66 81.8
QL12p035434 Quercus lobata HOM05D008117 ORTHO05D010265 8.5e-22 107.8 79 72.2
Potri.002G090100 Populus trichocarpa HOM05D008117 ORTHO05D010265 1.2e-20 104.0 79 70.9
Duzib041G0298 Durio zibethinus HOM05D008117 ORTHO05D010265 2.1e-20 103.2 79 69.6
Sc23g0000960 Simmondsia chinensis HOM05D008117 ORTHO05D010265 2.1e-20 103.2 86 59.3
Thecc.08G115700 Theobroma cacao HOM05D008117 ORTHO05D010265 2.1e-20 103.2 79 70.9
MD15G1359700 Malus domestica HOM05D008117 ORTHO05D010265 4.7e-20 102.1 66 75.8
Eucgr.F03736 Eucalyptus grandis HOM05D008117 ORTHO05D010265 1.0e-19 100.9 86 68.6
Nn5g27934 Nelumbo nucifera HOM05D008117 ORTHO05D010265 1.8e-19 100.1 79 67.1
EL10Ac5g11972 Beta vulgaris HOM05D008117 ORTHO05D010265 2.3e-19 99.8 66 72.7
Lj1g0006954 Lotus japonicus HOM05D008117 ORTHO05D010265 2.3e-19 99.8 71 71.8
DCAR_028229 Daucus carota HOM05D008117 ORTHO05D010265 3.0e-19 99.4 63 76.2
Gohir.A05G231100 Gossypium hirsutum HOM05D008117 ORTHO05D010265 3.0e-19 99.4 79 68.4
vmacro12526 Vaccinium macrocarpon HOM05D008117 ORTHO05D010265 3.0e-19 99.4 83 68.7
Manes.18G072200 Manihot esculenta HOM05D008117 ORTHO05D010265 3.9e-19 99.0 79 69.6
arahy.Tifrunner.gnm1.ann1.J5UY3S Arachis hypogaea HOM05D008117 ORTHO05D010265 8.8e-19 97.8 92 62.0
EL10Ac1g00048 Beta vulgaris HOM05D008117 ORTHO05D010265 8.8e-19 97.8 76 61.8
Ciclev10002965m.g Citrus clementina HOM05D008117 ORTHO05D010265 8.8e-19 97.8 76 67.1
arahy.Tifrunner.gnm1.ann1.V815ZK Arachis hypogaea HOM05D008117 ORTHO05D010265 1.1e-18 97.4 92 62.0
Psat5g111920 Pisum sativum HOM05D008117 ORTHO05D010265 1.1e-18 97.4 71 70.4
CSS0024149 Camellia sinensis var. sinensis HOM05D008117 ORTHO05D010265 2.0e-18 96.7 68 75.0
Rhsim13G0192300 Rhododendron simsii HOM05D008117 ORTHO05D010265 3.3e-18 95.9 70 71.4
Phvul.008G168800 Phaseolus vulgaris HOM05D008117 ORTHO05D010265 5.7e-18 95.1 69 68.1
Prupe.1G507400 Prunus persica HOM05D008117 ORTHO05D010265 5.7e-18 95.1 82 65.9
Hund16816 Selenicereus undatus HOM05D008117 ORTHO05D010265 9.7e-18 94.4 79 62.0
Sopen11g008360 Solanum pennellii HOM05D008117 ORTHO05D010265 1.3e-17 94.0 76 65.8
Medtr5g062750 Medicago truncatula HOM05D008117 ORTHO05D010265 1.7e-17 93.6 86 60.5
PGR042G1408 Punica granatum HOM05D008117 ORTHO05D010265 1.7e-17 93.6 83 63.9
AUR62002978 Chenopodium quinoa HOM05D008117 ORTHO05D010265 2.8e-17 92.8 75 62.7
Glyma.13G084800 Glycine max HOM05D008117 ORTHO05D010265 4.8e-17 92.0 69 65.2
Glyma.14G166600 Glycine max HOM05D008117 ORTHO05D010265 6.3e-17 91.7 66 66.7
MSTRG.24141 Avicennia marina HOM05D008117 ORTHO05D010265 8.2e-17 91.3 64 68.8
Oeu002001.1 Olea europaea HOM05D008117 ORTHO05D010265 1.8e-16 90.1 72 65.3
PGSC0003DMG400006546 Solanum tuberosum HOM05D008117 ORTHO05D010265 1.8e-16 90.1 75 64.0
FAN08G2903 Fragaria x ananassa HOM05D008117 ORTHO05D010265 1.2e-15 87.4 72 65.3
Lalb_Chr04g0253261 Lupinus albus HOM05D008117 ORTHO05D010265 2.0e-15 86.7 74 63.5
SGA_v2.0_scaffold25G11087 Striga asiatica HOM05D008117 ORTHO05D010265 2.6e-15 86.3 63 63.5
CAN.G61.2 Capsicum annuum HOM05D008117 ORTHO05D010265 4.5e-15 85.5 75 60.0
FvH4_5g38460 Fragaria vesca HOM05D008117 ORTHO05D010265 4.5e-15 85.5 70 65.7
FAN13G1450 Fragaria x ananassa HOM05D008117 ORTHO05D010265 4.5e-15 85.5 70 65.7
Gohir.D05G233600 Gossypium hirsutum HOM05D008117 ORTHO05D010265 4.5e-15 85.5 79 62.0
Gorai.009G241700 Gossypium raimondii HOM05D008117 ORTHO05D010265 4.5e-15 85.5 79 62.0
HPP92_011399 Vanilla planifolia HOM05D008117 ORTHO05D010265 4.5e-15 85.5 77 58.4
CANSAT35G0099 Cannabis sativa HOM05D008117 ORTHO05D010265 5.9e-15 85.1 74 67.6
RcHm_v2.0_Chr7g0240501 Rosa chinensis HOM05D008117 ORTHO05D010265 1.0e-14 84.3 70 64.3
Potri.005G171000 Populus trichocarpa HOM05D008117 ORTHO05D010265 1.3e-14 84.0 74 67.6
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 1.7e-14 83.6 62 69.4
A01p25940 Brassica napus HOM05D008117 ORTHO05D010265 7.2e-13 78.2 67 65.7
C01p32870 Brassica napus HOM05D008117 ORTHO05D010265 7.2e-13 78.2 67 65.7
BolC1t03228H Brassica oleracea HOM05D008117 ORTHO05D010265 1.6e-12 77.0 67 64.2
CDE08G1486 Ceratophyllum demersum HOM05D008117 ORTHO05D010265 3.6e-12 75.9 51 76.5
Thhalv10009847m.g Eutrema salsugineum HOM05D008117 ORTHO05D010265 3.6e-12 75.9 62 66.1
FAN04G0767 Fragaria x ananassa HOM05D008117 ORTHO05D010265 4.7e-12 75.5 77 58.4
CARHR035030 Cardamine hirsuta HOM05D008117 ORTHO05D010265 1.0e-11 74.3 67 62.7
Carub.0001s3375 Capsella rubella HOM05D008117 ORTHO05D010265 3.9e-11 72.4 67 61.2
Zm00001eb227210 Zea mays HOM05D008117 ORTHO05D010265 6.7e-11 71.6 54 66.7
Os02g0552400 Oryza sativa ssp. japonica HOM05D008117 ORTHO05D010265 2.0e-10 70.1 59 57.6
Aa31LG6G9030 Aethionema arabicum HOM05D008117 ORTHO05D010265 3.3e-10 69.3 67 59.7
Zm00001eb243570 Zea mays HOM05D008117 ORTHO05D010265 3.3e-10 69.3 54 63.0
AT1G36380 Arabidopsis thaliana HOM05D008117 ORTHO05D010265 7.4e-10 68.2 80 55.0
A05p19980 Brassica napus HOM05D008117 ORTHO05D010265 1.3e-09 67.4 62 62.9
BraA05t20905Z Brassica rapa HOM05D008117 ORTHO05D010265 1.3e-09 67.4 62 62.9
SalBow6G0993 Salvia bowleyana HOM05D008117 ORTHO05D010265 1.8e-08 63.5 34 88.2
VMungo0647G2241 Vigna mungo HOM05D008117 ORTHO05D010265 1.8e-08 63.5 42 69.0
AagrBONN_evm.TU.Sc2ySwM_117.1449 Anthoceros agrestis HOM05D008117 ORTHO05D010265 3.1e-08 62.8 61 47.5
CDE06G1754 Ceratophyllum demersum HOM05D000001 ORTHO05D011242 4.5e-07 58.9 42 69.0
SEGI_19848 Sequoiadendron giganteum HOM05D008117 ORTHO05D010265 1.0e-06 57.8 62 53.2


User provided reference genes

Program Settings