Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C030266.2 Cucumis melo HOM05D008761 ORTHO05D009079 1.8e-119 432.6 213 100.0
MELO3C034907.2 Cucumis melo HOM05D008761 ORTHO05D009079 4.5e-94 348.2 183 94.5
MELO3C027609.2 Cucumis melo HOM05D008761 ORTHO05D009079 9.3e-92 340.5 183 91.8
MELO3C034600.2 Cucumis melo HOM05D008761 ORTHO05D009079 1.3e-90 336.7 183 91.8
MELO3C033517.2 Cucumis melo HOM05D008761 ORTHO05D009079 8.5e-69 264.2 181 76.8
MELO3C033428.2 Cucumis melo HOM05D008761 ORTHO05D009079 5.0e-61 238.4 129 92.2
MELO3C030511.2 Cucumis melo HOM05D008761 ORTHO05D009079 3.5e-54 215.7 117 91.5
MELO3C030852.2 Cucumis melo HOM05D008761 ORTHO05D009079 8.8e-42 174.5 103 86.4
Sed0015265 Sechium edule HOM05D008761 ORTHO05D009079 1.8e-31 140.2 179 40.8
MELO3C028439.2 Cucumis melo HOM05D008761 ORTHO05D009079 4.9e-24 115.5 62 91.9
MELO3C029203.2 Cucumis melo HOM05D008761 ORTHO05D009079 4.1e-23 112.5 183 35.5
ClCG07G007930 Citrullus lanatus HOM05D007907 ORTHO05D009079 7.8e-22 108.2 160 39.4
MELO3C007522.2 Cucumis melo HOM05D007907 ORTHO05D009079 3.0e-21 106.3 164 35.4
MELO3C033233.2 Cucumis melo HOM05D007907 ORTHO05D009079 3.9e-21 105.9 155 38.7
MELO3C030528.2 Cucumis melo HOM05D007907 ORTHO05D009079 5.0e-21 105.5 161 37.3
MELO3C034511.2 Cucumis melo HOM05D008761 ORTHO05D009079 8.6e-21 104.8 174 37.4
CsaV3_6G042820 Cucumis sativus L. HOM05D007907 ORTHO05D009079 1.1e-20 104.4 164 34.1
MELO3C035122.2 Cucumis melo HOM05D008761 ORTHO05D009079 2.5e-20 103.2 67 79.1
MELO3C030905.2 Cucumis melo HOM05D008761 ORTHO05D009079 3.3e-20 102.8 54 92.6
MELO3C032772.2 Cucumis melo HOM05D008761 ORTHO05D009079 3.3e-20 102.8 181 35.9
MELO3C029011.2 Cucumis melo HOM05D007907 ORTHO05D009079 5.6e-20 102.1 155 38.7
MELO3C028249.2 Cucumis melo HOM05D008761 ORTHO05D009079 7.3e-20 101.7 54 90.7
Sed0000312 Sechium edule HOM05D007907 ORTHO05D009079 1.2e-19 100.9 158 34.2
MELO3C029044.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.6e-19 100.5 154 36.4
MELO3C035178.2 Cucumis melo HOM05D008761 ORTHO05D009079 6.2e-19 98.6 57 80.7
MELO3C032522.2 Cucumis melo HOM05D008761 ORTHO05D009079 1.0e-18 97.8 159 36.5
MELO3C032062.2 Cucumis melo HOM05D008761 ORTHO05D009079 6.8e-18 95.1 181 33.1
MELO3C028279.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.2e-17 94.4 145 37.2
CsaV3_3G032530 Cucumis sativus L. HOM05D008761 ORTHO05D009079 1.2e-17 94.4 54 85.2
CsaV3_2G032890 Cucumis sativus L. HOM05D008761 ORTHO05D009079 3.4e-17 92.8 54 83.3
TWI14G0228 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.4e-17 92.8 195 34.4
TWI38G0271 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.4e-17 92.8 195 34.4
TWI75G0282 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.4e-17 92.8 195 34.4
TWI59G0262 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.4e-17 92.4 195 34.4
TWI73G0375 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.4e-17 92.4 195 34.4
CsaV3_2G013490 Cucumis sativus L. HOM05D008761 ORTHO05D009079 1.3e-16 90.9 54 81.5
Sed0023954 Sechium edule HOM05D007907 ORTHO05D000482 1.4e-15 87.4 157 33.8
Sed0015983 Sechium edule HOM05D007907 ORTHO05D000482 1.9e-15 87.0 155 31.0
Ciclev10019150m.g Citrus clementina HOM05D007816 ORTHO05D000482 4.1e-15 85.9 177 32.8
MELO3C031312.2 Cucumis melo HOM05D007907 ORTHO05D009079 4.1e-15 85.9 128 35.9
Ciclev10020564m.g Citrus clementina HOM05D007816 ORTHO05D000397 9.2e-15 84.7 178 34.3
MELO3C032179.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.6e-14 84.0 144 33.3
Ciclev10017905m.g Citrus clementina HOM05D007816 ORTHO05D000482 2.7e-14 83.2 178 29.2
MELO3C034303.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.7e-14 83.2 129 38.0
Ciclev10033715m.g Citrus clementina HOM05D007816 ORTHO05D000397 3.5e-14 82.8 157 32.5
TWI32G0457 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.5e-14 82.8 188 31.4
TWI38G1257 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.5e-14 82.8 188 30.9
TWI18G0509 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 4.6e-14 82.4 186 29.6
MELO3C035067.2 Cucumis melo HOM05D008761 ORTHO05D009079 6.0e-14 82.0 119 40.3
Sed0021824 Sechium edule HOM05D013362 ORTHO05D013626 6.0e-14 82.0 164 32.3
TWI36G1743 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 7.8e-14 81.6 188 30.9
TWI38G0813 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.0e-13 81.3 188 30.9
TWI53G0735 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.0e-13 81.3 188 30.9
TWI79G1717 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.0e-13 81.3 188 30.9
Ciclev10007144m.g Citrus clementina HOM05D007816 ORTHO05D000482 1.3e-13 80.9 175 30.3
CsaV3_3G027900 Cucumis sativus L. HOM05D007907 ORTHO05D009079 2.3e-13 80.1 119 38.7
Sed0008460 Sechium edule HOM05D007907 ORTHO05D000482 3.0e-13 79.7 134 34.3
MELO3C033465.2 Cucumis melo HOM05D008761 ORTHO05D009079 3.9e-13 79.3 139 36.0
TWI18G0429 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.9e-13 79.3 188 30.3
TWI18G0558 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.9e-13 79.3 188 30.9
TWI63G0135 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.9e-13 79.3 186 28.5
TWI63G0551 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 5.0e-13 79.0 192 31.2
TWI77G0435 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 2.5e-12 76.6 186 28.0
Sed0004924 Sechium edule HOM05D013362 ORTHO05D013626 9.5e-12 74.7 164 33.5
Ciclev10003531m.g Citrus clementina HOM05D002262 ORTHO05D000482 1.2e-11 74.3 166 30.1
Ciclev10003418m.g Citrus clementina HOM05D002262 ORTHO05D000482 1.6e-11 73.9 150 30.7
TWI75G0551 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 1.6e-11 73.9 185 27.0
Sed0013335 Sechium edule HOM05D007907 ORTHO05D009079 2.8e-11 73.2 108 33.3
MELO3C032155.2 Cucumis melo HOM05D007907 ORTHO05D009079 4.7e-11 72.4 135 34.8
Sed0023222 Sechium edule HOM05D007907 ORTHO05D009079 4.7e-11 72.4 153 29.4
TWI81G0979 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.7e-11 72.4 148 30.4
TWI74G0229 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.1e-11 71.6 148 29.7
MELO3C034387.2 Cucumis melo HOM05D008761 ORTHO05D009079 1.1e-10 71.2 107 35.5
Oeu047399.1 Olea europaea HOM05D007816 ORTHO05D000397 1.1e-10 71.2 186 30.1
TWI18G0445 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.1e-10 71.2 184 27.7
TWI39G0946 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.1e-10 71.2 184 27.7
TWI74G1109 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 1.1e-10 71.2 184 27.7
TWI77G0850 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.1e-10 71.2 184 27.7
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.3e-10 70.1 157 27.4
Oeu026439.1 Olea europaea HOM05D007816 ORTHO05D000397 2.3e-10 70.1 142 30.3
Oeu028038.1 Olea europaea HOM05D000700 ORTHO05D000397 3.1e-10 69.7 141 27.7
Oeu044756.1 Olea europaea HOM05D007816 ORTHO05D000397 3.1e-10 69.7 184 28.8
Oeu048342.1 Olea europaea HOM05D007816 ORTHO05D000397 3.1e-10 69.7 141 31.9
TWI12G1016 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.1e-10 69.7 161 28.6
Oeu013150.1 Olea europaea HOM05D007816 ORTHO05D000397 5.2e-10 68.9 150 30.0
Oeu039421.1 Olea europaea HOM05D006164 ORTHO05D001269 6.8e-10 68.6 139 30.2
MELO3C028970.2 Cucumis melo HOM05D008761 ORTHO05D009079 8.9e-10 68.2 115 34.8
MELO3C034753.2 Cucumis melo HOM05D007907 ORTHO05D009079 8.9e-10 68.2 104 37.5
TWI63G1251 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.9e-10 68.2 163 28.2
Oeu027805.1 Olea europaea HOM05D000700 ORTHO05D000397 1.2e-09 67.8 142 28.2
Nitab4.5_0001927g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.0e-09 67.0 157 26.8
MELO3C027792.2 Cucumis melo HOM05D008761 ORTHO05D009079 5.8e-09 65.5 114 35.1
Oeu021073.1 Olea europaea HOM05D006164 ORTHO05D001269 9.8e-09 64.7 175 28.6
MELO3C035052.2 Cucumis melo HOM05D008761 ORTHO05D009079 1.3e-08 64.3 85 40.0
Nitab4.5_0009218g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.3e-08 64.3 157 26.1
Nitab4.5_0003887g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.7e-08 63.9 153 26.1
PSO063G4195 Papaver somniferum HOM05D007816 ORTHO05D000397 1.7e-08 63.9 168 26.8
CANSAT80G2675 Cannabis sativa HOM05D002262 ORTHO05D000482 2.2e-08 63.5 161 27.3
PSO421G0071 Papaver somniferum HOM05D007816 ORTHO05D000397 2.2e-08 63.5 168 26.2
Nitab4.5_0008534g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.9e-08 63.2 156 25.0
CANSAT21G1491 Cannabis sativa HOM05D001081 ORTHO05D001269 3.7e-08 62.8 182 26.9
PSO339G2393 Papaver somniferum HOM05D009891 ORTHO05D009626 6.4e-08 62.0 127 28.3
Sed0016762 Sechium edule HOM05D025229 ORTHO05D000482 6.4e-08 62.0 119 31.9
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-07 60.8 147 27.9
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 1.9e-07 60.5 125 30.4
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 1.9e-07 60.5 125 30.4
MELO3C035049.2 Cucumis melo HOM05D008761 ORTHO05D009079 1.9e-07 60.5 70 42.9
Sopen10g010760 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-07 60.5 130 26.9
Ciclev10033786m.g Citrus clementina HOM05D007816 ORTHO05D000397 2.4e-07 60.1 90 36.7
CANSAT35G1946 Cannabis sativa HOM05D009344 ORTHO05D001269 3.2e-07 59.7 156 25.6
Oeu045767.1 Olea europaea HOM05D006164 ORTHO05D001269 3.2e-07 59.7 198 24.7
Sopen06g015940 Solanum pennellii HOM05D000679 ORTHO05D000482 3.2e-07 59.7 140 27.9
MELO3C034583.2 Cucumis melo HOM05D008761 ORTHO05D009079 5.4e-07 58.9 103 34.0
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 7.1e-07 58.5 141 27.7
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 7.1e-07 58.5 147 28.6
Thhalv10029276m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 9.2e-07 58.2 150 25.3
Oeu026344.1 Olea europaea HOM05D006164 ORTHO05D001269 9.2e-07 58.2 121 28.1
Oeu038998.1 Olea europaea HOM05D002749 ORTHO05D000708 9.2e-07 58.2 189 21.2
Oeu048682.1 Olea europaea HOM05D007816 ORTHO05D000397 1.2e-06 57.8 142 28.9
Oeu051118.1 Olea europaea HOM05D000700 ORTHO05D000397 1.2e-06 57.8 164 23.8
PSO384G3001 Papaver somniferum HOM05D009891 ORTHO05D009626 1.2e-06 57.8 127 28.3
SGA_v2.0_scaffold3G01660 Striga asiatica HOM05D008585 ORTHO05D000397 1.2e-06 57.8 143 27.3
BcaC01g05607 Brassica carinata HOM05D000675 ORTHO05D000395 1.6e-06 57.4 186 27.4
CANSAT54G0758 Cannabis sativa HOM05D002262 ORTHO05D000482 1.6e-06 57.4 207 27.1
Nitab4.5_0003911g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.6e-06 57.4 157 26.1
Nitab4.5_0013676g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.6e-06 57.4 157 25.5
Solyc03g034207.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 1.6e-06 57.4 179 22.9
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-06 57.0 140 27.1
Thhalv10015691m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 2.1e-06 57.0 144 25.7
TWI74G0172 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.1e-06 57.0 141 29.1
Nitab4.5_0001308g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.7e-06 56.6 157 25.5
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.7e-06 56.6 157 24.8
PGSC0003DMG400046174 Solanum tuberosum HOM05D000679 ORTHO05D000482 2.7e-06 56.6 178 22.5
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 4.6e-06 55.8 141 26.2
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 4.6e-06 55.8 153 23.5
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 4.6e-06 55.8 146 25.3
Nitab4.5_0001927g0100 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.6e-06 55.8 153 26.1
Sopen01g053420 Solanum pennellii HOM05D000679 ORTHO05D014266 4.6e-06 55.8 182 23.6
BcaC06g34271 Brassica carinata HOM05D001038 ORTHO05D000395 6.0e-06 55.5 141 28.4
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 6.0e-06 55.5 140 25.7
MELO3C032012.2 Cucumis melo HOM05D007907 ORTHO05D009079 6.0e-06 55.5 64 39.1
Nitab4.5_0000237g0020 Nicotiana tabacum HOM05D008646 ORTHO05D010739 6.0e-06 55.5 167 23.4
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 7.8e-06 55.1 133 27.8
MELO3C034265.2 Cucumis melo HOM05D007907 ORTHO05D009079 7.8e-06 55.1 62 38.7
Thhalv10023196m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.8e-06 55.1 174 28.7
Sopen07g022050 Solanum pennellii HOM05D000679 ORTHO05D000482 7.8e-06 55.1 140 28.6


User provided reference genes

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