Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C030144.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.5e-70 268.1 127 100.0
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 2.1e-38 162.5 90 77.8
MELO3C032996.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.9e-36 156.0 79 87.3
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.6e-36 154.5 80 85.0
MELO3C032718.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.8e-35 152.1 88 79.5
MELO3C029411.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.7e-35 151.8 78 85.9
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.5e-33 146.4 94 64.9
MELO3C035437.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.5e-33 144.8 73 86.3
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 9.9e-33 143.7 86 69.8
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.3e-32 143.3 86 69.8
MELO3C028434.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.9e-32 142.1 86 69.8
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 1.4e-31 139.8 85 68.2
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.4e-31 139.0 83 69.9
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.2e-31 138.7 83 68.7
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.4e-28 127.5 90 63.3
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.6e-27 126.3 83 63.9
MELO3C029981.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.7e-27 125.2 98 58.2
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-26 123.6 83 63.9
MELO3C029040.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.1e-26 122.1 102 52.0
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 6.9e-26 120.9 105 53.3
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 5.8e-25 117.9 85 56.5
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 5.8e-25 117.9 86 58.1
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 6.5e-24 114.4 85 55.3
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 1.1e-23 113.6 76 60.5
RcHm_v2.0_Chr3g0492801 Rosa chinensis HOM05D007314 ORTHO05D003768 1.4e-23 113.2 84 54.8
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.2e-23 112.1 83 61.4
RcHm_v2.0_Chr5g0059371 Rosa chinensis HOM05D007314 ORTHO05D003768 9.3e-23 110.5 85 55.3
MELO3C031375.2 Cucumis melo HOM05D008781 ORTHO05D003768 2.1e-22 109.4 85 62.4
RcHm_v2.0_Chr7g0200591 Rosa chinensis HOM05D007314 ORTHO05D003768 1.3e-21 106.7 87 49.4
CsaV3_4G009050 Cucumis sativus L. HOM05D007314 ORTHO05D003768 1.8e-21 106.3 83 53.0
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.9e-21 105.1 75 60.0
FvH4_4g01311 Fragaria vesca HOM05D007314 ORTHO05D003768 2.5e-20 102.4 83 53.0
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.3e-20 102.1 68 63.2
FvH4_4g12371 Fragaria vesca HOM05D007314 ORTHO05D003768 7.4e-20 100.9 93 47.3
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 1.6e-19 99.8 67 59.7
CANSAT35G0660 Cannabis sativa HOM05D007314 ORTHO05D003768 2.4e-18 95.9 116 41.4
MELO3C035072.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.6e-17 92.4 75 52.0
MELO3C034792.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.3e-16 90.1 63 63.5
FvH4_6g21082 Fragaria vesca HOM05D007314 ORTHO05D003768 1.3e-16 90.1 62 56.5
CANSAT25G1818 Cannabis sativa HOM05D007314 ORTHO05D003768 2.2e-16 89.4 85 47.1
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 8.5e-16 87.4 73 56.2
MELO3C032661.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-15 87.0 43 81.4
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 1.4e-15 86.7 71 45.1
MELO3C033672.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.9e-15 86.3 47 74.5
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 4.2e-15 85.1 73 53.4
MELO3C029734.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.2e-15 84.3 50 72.0
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 1.6e-14 83.2 82 41.5
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 2.1e-14 82.8 73 52.1
MELO3C029576.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.6e-14 82.0 61 59.0
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 6.1e-14 81.3 73 52.1
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 1.8e-13 79.7 73 50.7
MELO3C029566.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.0e-13 79.0 58 60.3
RcHm_v2.0_Chr7g0177401 Rosa chinensis HOM05D007314 ORTHO05D003768 1.9e-12 76.3 54 55.6
MELO3C028630.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.4e-12 74.3 58 55.2
Atru.chr2.2530 Acer truncatum HOM05D001899 ORTHO05D001858 2.8e-11 72.4 87 41.4
MELO3C033635.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.3e-11 71.2 50 58.0
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 8.2e-11 70.9 77 42.9
BolC2t08290H Brassica oleracea HOM05D007314 ORTHO05D003768 1.1e-10 70.5 92 39.1
Aqoxy3G03529 Aquilegia oxysepala HOM05D007314 ORTHO05D003768 1.8e-10 69.7 103 35.0
Aqoxy5G02986 Aquilegia oxysepala HOM05D007314 ORTHO05D000285 3.1e-10 68.9 82 39.0
FvH4_6g20172 Fragaria vesca HOM05D008321 ORTHO05D003768 3.1e-10 68.9 78 39.7
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 4.1e-10 68.6 78 39.7
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 5.3e-10 68.2 78 39.7
FvH4_1g29373 Fragaria vesca HOM05D008321 ORTHO05D003768 1.5e-09 66.6 80 41.2
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 2.0e-09 66.2 78 38.5
BolC3t20566H Brassica oleracea HOM05D007314 ORTHO05D003768 2.6e-09 65.9 74 37.8
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.6e-09 65.9 72 43.1
MELO3C033118.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.4e-09 65.5 37 67.6
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 4.5e-09 65.1 75 40.0
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 4.5e-09 65.1 71 42.3
FAN15G1405 Fragaria x ananassa HOM05D008321 ORTHO05D003768 5.9e-09 64.7 96 36.5
PSO017G6448 Papaver somniferum HOM05D008526 ORTHO05D010380 7.7e-09 64.3 79 36.7
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 1.0e-08 63.9 76 39.5
FAN07G1302 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.0e-08 63.9 83 38.6
FvH4_3g21852 Fragaria vesca HOM05D008321 ORTHO05D003768 1.3e-08 63.5 73 39.7
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.3e-08 63.5 77 40.3
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 1.7e-08 63.2 76 38.2
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 1.7e-08 63.2 77 37.7
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 1.7e-08 63.2 72 43.1
PSO210G2358 Papaver somniferum HOM05D008526 ORTHO05D010380 1.7e-08 63.2 80 35.0
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 2.2e-08 62.8 83 41.0
MELO3C000505.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.5e-08 61.2 40 62.5
RcHm_v2.0_Chr5g0060161 Rosa chinensis HOM05D009091 ORTHO05D003768 6.5e-08 61.2 77 41.6
FvH4_5g23172 Fragaria vesca HOM05D008321 ORTHO05D003768 8.5e-08 60.8 70 41.4
CSS0009587 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 1.1e-07 60.5 61 49.2
CSS0011469 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 1.1e-07 60.5 61 49.2
MELO3C032453.2 Cucumis melo HOM05D007314 ORTHO05D034924 1.9e-07 59.7 44 52.3
ClCG02G008860 Citrullus lanatus HOM05D007314 ORTHO05D003768 4.2e-07 58.5 71 47.9
RcHm_v2.0_Chr1g0326261 Rosa chinensis HOM05D009091 ORTHO05D003768 5.5e-07 58.2 68 41.2
Atru.chr4.2623 Acer truncatum HOM05D008321 ORTHO05D003768 1.6e-06 56.6 73 41.1
Aqoxy4G01428 Aquilegia oxysepala HOM05D029945 ORTHO05D003170 2.1e-06 56.2 78 37.2
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 2.1e-06 56.2 72 41.7
MELO3C030131.2 Cucumis melo HOM05D004229 ORTHO05D025211 2.7e-06 55.8 34 73.5
Ciclev10002181m.g Citrus clementina HOM05D000539 ORTHO05D000592 3.6e-06 55.5 82 37.8
FvH4_3g32731 Fragaria vesca HOM05D008321 ORTHO05D003768 3.6e-06 55.5 74 37.8
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 4.7e-06 55.1 82 37.8


User provided reference genes

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