Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C030134.2 Cucumis melo HOM05D005133 ORTHO05D006685 4.5e-80 301.2 154 100.0
MELO3C031967.2 Cucumis melo HOM05D005133 ORTHO05D165940 1.2e-32 143.7 130 65.4
MELO3C033909.2 Cucumis melo HOM05D005133 ORTHO05D020525 3.5e-32 142.1 80 88.8
MELO3C033838.2 Cucumis melo HOM05D005133 ORTHO05D166559 9.9e-27 124.0 107 63.6
MELO3C030860.2 Cucumis melo HOM05D005133 ORTHO05D006685 1.9e-22 109.8 127 55.9
MELO3C029591.2 Cucumis melo HOM05D005133 ORTHO05D168107 1.6e-21 106.7 57 93.0
MELO3C032291.2 Cucumis melo HOM05D005133 ORTHO05D167678 1.2e-16 90.5 127 50.4
MELO3C006074.2 Cucumis melo HOM05D005133 ORTHO05D006685 8.7e-15 84.3 85 57.6
CsaV3_3G008530 Cucumis sativus L. HOM05D005133 ORTHO05D006685 8.7e-15 84.3 61 73.8
MELO3C030086.2 Cucumis melo HOM05D005133 ORTHO05D167493 2.5e-14 82.8 46 93.5
ClCG05G014200 Citrullus lanatus HOM05D005133 ORTHO05D006685 1.8e-12 76.6 73 65.8
Sed0023612 Sechium edule HOM05D005133 ORTHO05D006685 1.3e-10 70.5 62 66.1
MELO3C027575.2 Cucumis melo HOM05D019030 ORTHO05D006685 3.8e-10 68.9 44 81.8
Dinv43872 Davidia involucrata HOM05D005133 ORTHO05D006685 9.3e-09 64.3 71 56.3
Ciclev10020434m.g Citrus clementina HOM05D005133 ORTHO05D006685 1.2e-08 63.9 74 54.1
Thecc.01G351000 Theobroma cacao HOM05D005133 ORTHO05D006685 1.6e-08 63.5 71 57.7
Cpa.g.sc11.53 Carica papaya HOM05D005133 ORTHO05D006685 2.7e-08 62.8 52 69.2
Solyc01g095230.4 Solanum lycopersicum HOM05D005133 ORTHO05D006685 2.7e-08 62.8 52 71.2
Sopen01g039020 Solanum pennellii HOM05D005133 ORTHO05D006685 2.7e-08 62.8 52 71.2
PGSC0003DMG401000198 Solanum tuberosum HOM05D005133 ORTHO05D006685 2.7e-08 62.8 52 71.2
COL.COLO4_06373 Corchorus olitorius HOM05D005133 ORTHO05D006685 3.5e-08 62.4 50 72.0
Haze_14198 Corylus avellana HOM05D005133 ORTHO05D006685 3.5e-08 62.4 81 50.6
Gohir.A07G140500 Gossypium hirsutum HOM05D005133 ORTHO05D006685 4.6e-08 62.0 71 56.3
Cfa007878 Carpinus fangiana HOM05D005133 ORTHO05D006685 6.0e-08 61.6 81 50.6
QL07p038619 Quercus lobata HOM05D005133 ORTHO05D006685 6.0e-08 61.6 52 65.4
Atru.chr5.593 Acer truncatum HOM05D005133 ORTHO05D006685 7.9e-08 61.2 59 64.4
Lj7C506T5 Lonicera japonica HOM05D005133 ORTHO05D006685 7.9e-08 61.2 71 52.1
Oeu015214.1 Olea europaea HOM05D005133 ORTHO05D006685 7.9e-08 61.2 66 53.0
Peaxi162Scf00020g01713 Petunia axillaris HOM05D005133 ORTHO05D006685 7.9e-08 61.2 52 67.3
Haze_15576 Corylus avellana HOM05D005133 ORTHO05D006685 1.0e-07 60.8 67 56.7
Dinv32531 Davidia involucrata HOM05D005133 ORTHO05D006685 1.0e-07 60.8 71 53.5
Nitab4.5_0000915g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 1.0e-07 60.8 55 63.6
CSS0000155 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 1.3e-07 60.5 52 67.3
CSS0009332 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 1.3e-07 60.5 52 67.3
Cfa003860 Carpinus fangiana HOM05D005133 ORTHO05D006685 1.3e-07 60.5 60 56.7
Manes.01G251600 Manihot esculenta HOM05D005133 ORTHO05D006685 1.3e-07 60.5 55 61.8
Gohir.D07G145800 Gossypium hirsutum HOM05D005133 ORTHO05D006685 1.8e-07 60.1 63 60.3
Gorai.001G158000 Gossypium raimondii HOM05D005133 ORTHO05D006685 1.8e-07 60.1 63 60.3
Nitab4.5_0003501g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 2.3e-07 59.7 55 61.8
unitig_0.g335 Utricularia gibba HOM05D005133 ORTHO05D006685 3.0e-07 59.3 68 54.4
Duzib133G0222 Durio zibethinus HOM05D005133 ORTHO05D006685 3.9e-07 58.9 82 47.6
Ah.05g180080 Amaranthus hybridus HOM05D005133 ORTHO05D006685 5.1e-07 58.5 50 66.0
HPP92_023966 Vanilla planifolia HOM05D005133 ORTHO05D006685 5.1e-07 58.5 50 66.0
Ca_20805_v3 Cicer arietinum L. HOM05D005133 ORTHO05D006685 6.7e-07 58.2 52 63.5
LjContig00310g0005517 Lotus japonicus HOM05D005133 ORTHO05D006685 6.7e-07 58.2 52 63.5
Glyma.12G050200 Glycine max HOM05D005133 ORTHO05D006685 8.7e-07 57.8 52 63.5
Psat7g208960 Pisum sativum HOM05D005133 ORTHO05D006685 8.7e-07 57.8 52 61.5
Potri.014G091400 Populus trichocarpa HOM05D005133 ORTHO05D006685 8.7e-07 57.8 52 63.5
Actinidia20170 Actinidia chinensis HOM05D005133 ORTHO05D006685 1.1e-06 57.4 52 63.5
MSTRG.20869 Avicennia marina HOM05D005133 ORTHO05D006685 1.1e-06 57.4 64 54.7
CSS0040148 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 1.5e-06 57.0 71 52.1
GSVIVG01027010001 Vitis vinifera HOM05D005133 ORTHO05D006685 1.5e-06 57.0 52 61.5
ATR0626G352 Amborella trichopoda HOM05D005133 ORTHO05D006685 1.9e-06 56.6 54 61.1
arahy.Tifrunner.gnm1.ann1.JRPH7J Arachis hypogaea HOM05D005133 ORTHO05D006685 1.9e-06 56.6 50 66.0
CiPaw.02G036200 Carya illinoinensis HOM05D005133 ORTHO05D006685 1.9e-06 56.6 52 61.5
Cc06_g17440 Coffea canephora HOM05D005133 ORTHO05D006685 1.9e-06 56.6 49 65.3
PSO135G0656 Papaver somniferum HOM05D005133 ORTHO05D006685 1.9e-06 56.6 52 61.5
Aqoxy3G00498 Aquilegia oxysepala HOM05D005133 ORTHO05D006685 2.5e-06 56.2 98 41.8
CANSAT01G0674 Cannabis sativa HOM05D005133 ORTHO05D006685 2.5e-06 56.2 60 60.0
Migut.H02011 Erythranthe guttata HOM05D005133 ORTHO05D006685 2.5e-06 56.2 59 55.9
Migut.B01807 Erythranthe guttata HOM05D005133 ORTHO05D006685 3.3e-06 55.8 55 56.4
Migut.B01808 Erythranthe guttata HOM05D005133 ORTHO05D006685 3.3e-06 55.8 59 55.9
arahy.Tifrunner.gnm1.ann1.ZNWN3Y Arachis hypogaea HOM05D005133 ORTHO05D006685 4.3e-06 55.5 50 64.0
TPR.G34211 Trifolium pratense HOM05D005133 ORTHO05D006685 4.3e-06 55.5 52 59.6
TAR375G0148 Trochodendron aralioides HOM05D005133 ORTHO05D006685 4.3e-06 55.5 51 62.7
RcHm_v2.0_Chr1g0357891 Rosa chinensis HOM05D005133 ORTHO05D006685 5.6e-06 55.1 61 54.1
RcHm_v2.0_Chr1g0358091 Rosa chinensis HOM05D005133 ORTHO05D006685 5.6e-06 55.1 61 54.1
RcHm_v2.0_Chr1g0358181 Rosa chinensis HOM05D005133 ORTHO05D006685 5.6e-06 55.1 93 38.7
VMungo1127G1104 Vigna mungo HOM05D005133 ORTHO05D006685 7.4e-06 54.7 52 59.6
arahy.Tifrunner.gnm1.ann1.YZ0HQS Arachis hypogaea HOM05D005133 ORTHO05D006685 9.6e-06 54.3 50 64.0
Phvul.011G052300 Phaseolus vulgaris HOM05D005133 ORTHO05D006685 9.6e-06 54.3 52 59.6


User provided reference genes

Program Settings