Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029972.2 Cucumis melo HOM05D001626 ORTHO05D001563 2.7e-88 328.6 160 100.0
CsaV3_6G029690 Cucumis sativus L. HOM05D001626 ORTHO05D001563 2.3e-10 69.7 37 86.5
ClCG08G006630 Citrullus lanatus HOM05D001626 ORTHO05D001563 5.1e-10 68.6 37 83.8
Haze_17738 Corylus avellana HOM05D001626 ORTHO05D001563 3.7e-08 62.4 37 78.4
Gohir.A05G269800 Gossypium hirsutum HOM05D001626 ORTHO05D001563 3.7e-08 62.4 38 73.7
Duzib041G0287 Durio zibethinus HOM05D001626 ORTHO05D001563 6.3e-08 61.6 37 73.0
Duzib116G0253 Durio zibethinus HOM05D001626 ORTHO05D001563 8.2e-08 61.2 57 50.9
CiPaw.16G014700 Carya illinoinensis HOM05D001626 ORTHO05D001563 1.4e-07 60.5 37 73.0
Hund26712 Selenicereus undatus HOM05D001626 ORTHO05D001563 1.8e-07 60.1 37 70.3
Gohir.D05G271800 Gossypium hirsutum HOM05D001626 ORTHO05D001563 2.4e-07 59.7 37 70.3
Gorai.009G284800 Gossypium raimondii HOM05D001626 ORTHO05D001563 2.4e-07 59.7 37 70.3
Manes.18G090100 Manihot esculenta HOM05D001626 ORTHO05D001563 2.4e-07 59.7 37 75.7
Gohir.A05G242400 Gossypium hirsutum HOM05D001626 ORTHO05D001563 3.1e-07 59.3 37 70.3
Gohir.D05G243800 Gossypium hirsutum HOM05D001626 ORTHO05D001563 3.1e-07 59.3 37 70.3
Gorai.009G253100 Gossypium raimondii HOM05D001626 ORTHO05D001563 3.1e-07 59.3 37 70.3
Thecc.08G148600 Theobroma cacao HOM05D001626 ORTHO05D001563 3.1e-07 59.3 37 70.3
EL10Ac1g01510 Beta vulgaris HOM05D001626 ORTHO05D001563 4.1e-07 58.9 37 73.0
QL02p024321 Quercus lobata HOM05D001626 ORTHO05D001563 4.1e-07 58.9 37 73.0
Gohir.A02G112703 Gossypium hirsutum HOM05D001626 ORTHO05D001563 5.3e-07 58.5 37 70.3
Gohir.D03G060609 Gossypium hirsutum HOM05D001626 ORTHO05D001563 5.3e-07 58.5 37 70.3
Gorai.002G055200 Gossypium raimondii HOM05D001626 ORTHO05D001563 5.3e-07 58.5 37 70.3
Manes.02G177500 Manihot esculenta HOM05D001626 ORTHO05D001563 5.3e-07 58.5 37 73.0
AUR62013543 Chenopodium quinoa HOM05D001626 ORTHO05D001563 9.0e-07 57.8 37 70.3
AUR62026739 Chenopodium quinoa HOM05D001626 ORTHO05D001563 9.0e-07 57.8 37 70.3
Cc10_g14060 Coffea canephora HOM05D001626 ORTHO05D001563 9.0e-07 57.8 37 73.0
Eucgr.F02718 Eucalyptus grandis HOM05D001626 ORTHO05D001563 9.0e-07 57.8 37 70.3
FvH4_2g14240 Fragaria vesca HOM05D001626 ORTHO05D001563 9.0e-07 57.8 37 70.3
FAN20G1329 Fragaria x ananassa HOM05D001626 ORTHO05D001563 9.0e-07 57.8 37 70.3
Sabra05G0145200 Salix brachista HOM05D001626 ORTHO05D001563 1.2e-06 57.4 38 68.4
RcHm_v2.0_Chr6g0276391 Rosa chinensis HOM05D001626 ORTHO05D001563 1.5e-06 57.0 37 70.3
CSS0019772 Camellia sinensis var. sinensis HOM05D001626 ORTHO05D001563 2.0e-06 56.6 37 67.6
Potri.002G070200 Populus trichocarpa HOM05D001626 ORTHO05D001563 2.0e-06 56.6 37 70.3
Sabra02G0054800 Salix brachista HOM05D001626 ORTHO05D001563 2.0e-06 56.6 37 70.3
Actinidia15146 Actinidia chinensis HOM05D001626 ORTHO05D001563 2.6e-06 56.2 37 67.6
Ciclev10002251m.g Citrus clementina HOM05D001626 ORTHO05D001563 3.4e-06 55.8 37 64.9
Prupe.8G024700 Prunus persica HOM05D001626 ORTHO05D001563 3.4e-06 55.8 37 70.3
Lj2g0006895 Lotus japonicus HOM05D001626 ORTHO05D001563 4.5e-06 55.5 37 70.3
Lj2g0024137 Lotus japonicus HOM05D001626 ORTHO05D001563 4.5e-06 55.5 37 70.3
CsaV3_6G030780 Cucumis sativus L. HOM05D001626 ORTHO05D001563 5.9e-06 55.1 27 88.9
Dinv25843 Davidia involucrata HOM05D001626 ORTHO05D001563 5.9e-06 55.1 37 64.9
DCAR_010242 Daucus carota HOM05D001626 ORTHO05D001563 7.7e-06 54.7 39 66.7
arahy.Tifrunner.gnm1.ann1.1AX7R1 Arachis hypogaea HOM05D001626 ORTHO05D001563 1.0e-05 54.3 37 67.6


User provided reference genes

Program Settings