Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029836.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.4e-89 332.8 158 100.0
MELO3C031197.2 Cucumis melo HOM05D007230 ORTHO05D004756 3.2e-65 251.9 139 86.3
MELO3C030814.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.1e-60 236.9 148 77.7
MELO3C029711.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.7e-42 176.4 118 75.4
MELO3C030315.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.8e-36 156.4 133 59.4
MELO3C033487.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.5e-33 146.0 133 56.4
MELO3C029746.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.6e-33 144.8 142 56.3
COL.COLO4_34392 Corchorus olitorius HOM05D007230 ORTHO05D004756 3.0e-31 139.0 143 48.3
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 1.7e-29 133.3 134 49.3
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 5.4e-28 128.3 142 47.9
Sabra18G0086500 Salix brachista HOM05D007230 ORTHO05D004756 1.6e-27 126.7 144 45.8
Psat0ss2585g0560 Pisum sativum HOM05D007230 ORTHO05D004756 2.7e-27 125.9 135 48.9
Psat1g072080 Pisum sativum HOM05D007230 ORTHO05D004756 7.3e-25 117.9 132 47.7
COL.COLO4_04631 Corchorus olitorius HOM05D007230 ORTHO05D022123 1.8e-23 113.2 107 49.5
MELO3C035463.2 Cucumis melo HOM05D007230 ORTHO05D004756 6.8e-23 111.3 61 88.5
COL.COLO4_21692 Corchorus olitorius HOM05D007230 ORTHO05D004756 2.0e-22 109.8 112 47.3
MELO3C032792.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.3e-21 107.1 61 86.9
MELO3C033490.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.3e-18 97.1 62 79.0
Psat5g096840 Pisum sativum HOM05D007230 ORTHO05D004756 3.0e-18 95.9 76 60.5
Psat5g083840 Pisum sativum HOM05D007230 ORTHO05D004756 2.5e-17 92.8 76 60.5
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.3e-15 86.3 144 34.0
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.1e-15 85.9 158 32.9
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.6e-14 82.8 155 32.9
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.6e-14 82.8 155 32.9
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.6e-14 82.8 155 32.9
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.3e-13 80.5 155 32.3
MELO3C025326.2 Cucumis melo HOM05D000269 ORTHO05D000216 2.2e-13 79.7 79 46.8
Sabra15G0112800 Salix brachista HOM05D005223 ORTHO05D000001 2.9e-13 79.3 135 37.0
Rhsim05G0139800 Rhododendron simsii HOM05D007230 ORTHO05D004756 6.4e-13 78.2 146 32.2
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 7.1e-12 74.7 115 36.5
Rhsim11G0119100 Rhododendron simsii HOM05D007230 ORTHO05D004756 9.2e-12 74.3 132 32.6
SHI54737 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-11 73.6 128 33.6
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.1e-11 73.2 151 31.1
SHI11692 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-11 72.8 128 33.6
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 2.7e-11 72.8 128 33.6
SHI41657 Sapria himalayana HOM05D000002 ORTHO05D004756 2.7e-11 72.8 128 33.6
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-11 72.8 128 33.6
SHI02112 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-11 72.4 128 33.6
SHI02527 Sapria himalayana HOM05D007230 ORTHO05D004756 3.5e-11 72.4 128 33.6
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 7.8e-11 71.2 113 34.5
SHI06223 Sapria himalayana HOM05D000002 ORTHO05D000001 7.8e-11 71.2 128 32.8
SHI12633 Sapria himalayana HOM05D000002 ORTHO05D004756 1.0e-10 70.9 106 34.9
SHI28040 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-10 70.9 128 32.8
SHI45862 Sapria himalayana HOM05D007230 ORTHO05D004756 1.0e-10 70.9 113 34.5
MELO3C031455.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.3e-10 70.5 35 85.7
PSO063G0989 Papaver somniferum HOM05D007230 ORTHO05D004756 1.3e-10 70.5 121 28.9
SHI17244 Sapria himalayana HOM05D007230 ORTHO05D004756 1.7e-10 70.1 106 34.9
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 3.0e-10 69.3 120 30.8
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.0e-10 69.3 140 30.7
SHI32448 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-10 69.3 128 32.8
Psat2g117040 Pisum sativum HOM05D007230 ORTHO05D004756 3.9e-10 68.9 54 63.0
Manes.09G020501 Manihot esculenta HOM05D007908 ORTHO05D009653 5.1e-10 68.6 86 43.0
SHI24644 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-10 68.6 128 32.8
SHI53716 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-10 68.6 128 32.8
SHI31374 Sapria himalayana HOM05D000002 ORTHO05D000001 6.6e-10 68.2 128 31.2
CiPaw.05G144600 Carya illinoinensis HOM05D007908 ORTHO05D009653 1.5e-09 67.0 100 39.0
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 1.5e-09 67.0 128 32.0
SHI11549 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-09 67.0 128 32.0
SHI29623 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-09 67.0 130 31.5
SHI15740 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-09 66.6 127 32.3
Rhsim06G0147600 Rhododendron simsii HOM05D007230 ORTHO05D022123 2.5e-09 66.2 130 29.2
CSS0046673 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 3.3e-09 65.9 135 31.9
PSO017G2245 Papaver somniferum HOM05D000002 ORTHO05D000001 3.3e-09 65.9 142 29.6
SHI05604 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-09 65.9 126 31.7
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-09 65.9 126 31.0
CSS0008768 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 5.6e-09 65.1 135 31.9
CSS0016560 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 5.6e-09 65.1 135 31.9
CSS0047750 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 5.6e-09 65.1 135 31.9
PSO170G3518 Papaver somniferum HOM05D007230 ORTHO05D004756 5.6e-09 65.1 130 30.0
SHI47374 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-09 64.7 127 32.3
SHI20212 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-09 64.3 108 32.4
SHI31302 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-09 64.3 129 32.6
FvH4_1g15931 Fragaria vesca HOM05D000002 ORTHO05D000047 1.2e-08 63.9 107 32.7
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 1.2e-08 63.9 119 31.9
CSS0043144 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 1.6e-08 63.5 123 32.5
SHI35844 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-08 63.5 128 31.2
SHI40782 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-08 63.5 128 30.5
PSO675G6160 Papaver somniferum HOM05D000002 ORTHO05D004756 2.1e-08 63.2 120 29.2
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 2.1e-08 63.2 127 31.5
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-08 63.2 127 31.5
CSS0005225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-08 62.4 108 34.3
ECA232G4252 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.7e-08 62.0 159 30.8
PSO144G0017 Papaver somniferum HOM05D007230 ORTHO05D004756 4.7e-08 62.0 108 35.2
CAN.G183.8 Capsicum annuum HOM05D007908 ORTHO05D009653 6.2e-08 61.6 105 34.3
CiPaw.04G138200 Carya illinoinensis HOM05D007908 ORTHO05D009653 1.1e-07 60.8 105 35.2
SHI16498 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-07 60.8 127 30.7
CAN.G4.42 Capsicum annuum HOM05D007908 ORTHO05D000001 1.4e-07 60.5 123 32.5
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-07 60.5 125 32.0
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-07 60.5 125 32.0
SHI09801 Sapria himalayana HOM05D007230 ORTHO05D004756 1.4e-07 60.5 127 29.9
SHI11999 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-07 60.5 107 31.8
TPR.G13973 Trifolium pratense HOM05D007230 ORTHO05D004756 1.4e-07 60.5 111 33.3
SHI45992 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-07 60.1 110 34.5
Actinidia05629 Actinidia chinensis HOM05D007230 ORTHO05D004756 2.3e-07 59.7 102 34.3
CSS0040816 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-07 59.7 113 32.7
HanXRQChr10g0282921 Helianthus annuus HOM05D000002 ORTHO05D000047 2.3e-07 59.7 130 35.4
PSO782G2577 Papaver somniferum HOM05D000002 ORTHO05D004756 2.3e-07 59.7 103 34.0
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 3.1e-07 59.3 105 31.4
HanXRQChr09g0242891 Helianthus annuus HOM05D000002 ORTHO05D000047 4.0e-07 58.9 101 34.7
ECA238G2253 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-07 58.5 121 33.1
QL03p000720 Quercus lobata HOM05D000002 ORTHO05D000001 5.2e-07 58.5 90 34.4
HanXRQChr16g0520761 Helianthus annuus HOM05D000002 ORTHO05D000047 6.8e-07 58.2 115 32.2
ATR1102G064 Amborella trichopoda HOM05D027053 ORTHO05D026541 8.9e-07 57.8 99 34.3
CSS0015235 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 8.9e-07 57.8 106 33.0
CSS0045907 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 8.9e-07 57.8 106 33.0
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 8.9e-07 57.8 109 33.0
TPR.G39545 Trifolium pratense HOM05D007230 ORTHO05D004756 8.9e-07 57.8 127 29.9
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 1.2e-06 57.4 112 34.8
HanXRQChr09g0254811 Helianthus annuus HOM05D000002 ORTHO05D000001 1.5e-06 57.0 102 34.3
Potri.013G133550 Populus trichocarpa HOM05D010459 ORTHO05D004756 1.5e-06 57.0 108 32.4
SHI02490 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-06 57.0 66 39.4
SHI03218 Sapria himalayana HOM05D007230 ORTHO05D004756 1.5e-06 57.0 66 39.4
CSS0047076 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 2.0e-06 56.6 111 31.5
CANSAT01G0089 Cannabis sativa HOM05D000002 ORTHO05D000047 2.0e-06 56.6 152 30.3
CAN.G541.33 Capsicum annuum HOM05D007908 ORTHO05D009653 2.0e-06 56.6 162 30.9
ECA238G1061 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-06 56.6 153 30.7
PSO675G4469 Papaver somniferum HOM05D000002 ORTHO05D000001 2.0e-06 56.6 121 28.1
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 2.0e-06 56.6 66 39.4
CAN.G680.6 Capsicum annuum HOM05D007908 ORTHO05D009653 2.6e-06 56.2 100 30.0
CiPaw.14G112700 Carya illinoinensis HOM05D007908 ORTHO05D009653 2.6e-06 56.2 140 27.9
ECA233G3814 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-06 56.2 133 27.8
QL01p026368 Quercus lobata HOM05D000002 ORTHO05D000001 2.6e-06 56.2 109 32.1
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 2.6e-06 56.2 109 32.1
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 2.6e-06 56.2 109 32.1
CANSAT21G2108 Cannabis sativa HOM05D000002 ORTHO05D000047 3.4e-06 55.8 127 27.6
QL04p089373 Quercus lobata HOM05D000002 ORTHO05D000001 3.4e-06 55.8 109 32.1
COL.COLO4_28935 Corchorus olitorius HOM05D007230 ORTHO05D004756 4.4e-06 55.5 110 32.7
ECA240G1968 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-06 55.5 139 28.8
Manes.14G134321 Manihot esculenta HOM05D007230 ORTHO05D004756 4.4e-06 55.5 100 33.0
QL09p018296 Quercus lobata HOM05D000002 ORTHO05D000001 4.4e-06 55.5 125 29.6
TWI38G0479 Tripterygium wilfordii HOM05D000002 ORTHO05D018019 4.4e-06 55.5 151 28.5
ECA233G0216 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-06 55.1 142 28.2
HanXRQChr05g0130761 Helianthus annuus HOM05D000002 ORTHO05D000047 5.8e-06 55.1 133 32.3
Hund22143 Selenicereus undatus HOM05D011658 ORTHO05D020999 5.8e-06 55.1 92 30.4
TWI23G0326 Tripterygium wilfordii HOM05D000002 ORTHO05D018019 5.8e-06 55.1 151 28.5
TWI31G1243 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 5.8e-06 55.1 144 27.1
TWI34G1144 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 5.8e-06 55.1 144 27.1
COL.COLO4_20910 Corchorus olitorius HOM05D000002 ORTHO05D004756 7.6e-06 54.7 149 30.2
ECA240G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.6e-06 54.7 143 28.7
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 7.6e-06 54.7 130 30.8
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 7.6e-06 54.7 130 30.8
Sopen00g009150 Solanum pennellii HOM05D000002 ORTHO05D000001 7.6e-06 54.7 108 32.4
CSS0049897 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 9.9e-06 54.3 43 53.5
CAN.G680.8 Capsicum annuum HOM05D007908 ORTHO05D009653 9.9e-06 54.3 91 35.2
CiPaw.12G035000 Carya illinoinensis HOM05D007908 ORTHO05D009653 9.9e-06 54.3 109 34.9
CiPaw.16G100000 Carya illinoinensis HOM05D007908 ORTHO05D009653 9.9e-06 54.3 109 31.2
ECA234G3257 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.9e-06 54.3 132 31.1
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 9.9e-06 54.3 105 29.5


User provided reference genes

Program Settings