Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029734.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-133 479.9 238 100.0
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.0e-42 176.8 358 36.3
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.8e-42 175.3 89 93.3
MELO3C033672.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-40 171.0 94 87.2
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.1e-39 166.8 114 75.4
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.5e-34 150.6 251 39.0
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 1.5e-29 134.0 290 33.8
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.4e-25 118.6 271 31.0
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.9e-24 117.1 258 31.4
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 2.5e-21 106.7 283 31.1
Sed0001060 Sechium edule HOM05D007314 ORTHO05D003768 4.3e-21 105.9 115 54.8
Sed0001469 Sechium edule HOM05D007314 ORTHO05D003768 4.3e-21 105.9 115 54.8
Sed0011465 Sechium edule HOM05D007314 ORTHO05D003768 4.3e-21 105.9 115 54.8
CsaV3_4G009050 Cucumis sativus L. HOM05D007314 ORTHO05D003768 3.6e-20 102.8 58 79.3
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 3.6e-20 102.8 268 29.9
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 6.9e-19 98.6 264 29.5
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.4e-17 92.0 61 60.7
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-16 91.3 61 59.0
MELO3C028434.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.9e-16 90.5 72 54.2
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.4e-16 89.0 61 57.4
CANSAT25G0318 Cannabis sativa HOM05D007314 ORTHO05D010380 7.1e-16 88.6 132 42.4
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 7.1e-16 88.6 85 55.3
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 9.3e-16 88.2 293 29.0
MELO3C029411.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.1e-15 87.0 103 49.5
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 2.7e-15 86.7 106 44.3
MELO3C029981.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.9e-15 85.1 51 66.7
MELO3C030144.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.8e-14 84.0 50 72.0
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 3.0e-14 83.2 225 29.3
MELO3C035437.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.9e-14 82.8 57 68.4
RcHm_v2.0_Chr3g0492801 Rosa chinensis HOM05D007314 ORTHO05D003768 3.9e-14 82.8 63 57.1
RcHm_v2.0_Chr5g0059371 Rosa chinensis HOM05D007314 ORTHO05D003768 3.9e-14 82.8 55 63.6
MELO3C032996.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.1e-14 82.4 50 74.0
ClCG11G015990 Citrullus lanatus HOM05D007314 ORTHO05D003768 6.7e-14 82.0 75 57.3
FvH4_4g12371 Fragaria vesca HOM05D007314 ORTHO05D003768 6.7e-14 82.0 178 32.6
MELO3C034792.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.7e-14 81.6 63 50.8
FvH4_4g01311 Fragaria vesca HOM05D007314 ORTHO05D003768 1.1e-13 81.3 59 61.0
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.3e-13 79.7 54 61.1
Rhsim01G0136300 Rhododendron simsii HOM05D004909 ORTHO05D009316 3.3e-13 79.7 82 51.2
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 4.3e-13 79.3 274 26.3
ClCG07G007690 Citrullus lanatus HOM05D000107 ORTHO05D000062 7.4e-13 78.6 88 47.7
MELO3C029576.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.7e-12 76.3 48 64.6
Rhsim06G0121300 Rhododendron simsii HOM05D007314 ORTHO05D010380 4.8e-12 75.9 81 50.6
MELO3C029040.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.8e-11 73.9 38 73.7
MELO3C033118.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.8e-11 73.9 36 86.1
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 2.4e-11 73.6 57 59.6
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 3.1e-11 73.2 35 85.7
Rhsim04G0083300 Rhododendron simsii HOM05D007314 ORTHO05D010380 3.1e-11 73.2 93 46.2
MELO3C032718.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.9e-11 72.0 59 57.6
MELO3C035072.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.0e-11 71.6 38 71.1
MELO3C028630.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-10 71.2 55 52.7
Rhsim03G0123400 Rhododendron simsii HOM05D007314 ORTHO05D010380 1.2e-10 71.2 83 44.6
MELO3C022824.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.6e-10 70.1 53 66.0
MELO3C029566.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.8e-10 68.9 91 39.6
RcHm_v2.0_Chr7g0200591 Rosa chinensis HOM05D007314 ORTHO05D003768 1.7e-09 67.4 70 45.7
BolC4t24885H Brassica oleracea HOM05D031530 ORTHO05D023934 2.2e-09 67.0 91 40.7
MELO3C033635.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.2e-09 67.0 48 58.3
Rhsim04G0152600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-08 64.3 115 39.1
Aqoxy1G02807 Aquilegia oxysepala HOM05D008321 ORTHO05D003768 2.1e-07 60.5 89 39.3
FvH4_6g21082 Fragaria vesca HOM05D007314 ORTHO05D003768 3.5e-07 59.7 33 75.8
Rhsim01G0043800 Rhododendron simsii HOM05D007314 ORTHO05D003768 6.0e-07 58.9 51 52.9
Sed0028051 Sechium edule HOM05D007314 ORTHO05D010380 1.3e-06 57.8 39 74.4
ClCG10G008410 Citrullus lanatus HOM05D007314 ORTHO05D003768 3.0e-06 56.6 132 37.9
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 3.9e-06 56.2 67 38.8
MELO3C032661.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.9e-06 56.2 33 66.7
MELO3C031375.2 Cucumis melo HOM05D008781 ORTHO05D003768 5.1e-06 55.8 42 59.5
Aqoxy3G03529 Aquilegia oxysepala HOM05D007314 ORTHO05D003768 8.7e-06 55.1 47 46.8
Aqoxy5G02986 Aquilegia oxysepala HOM05D007314 ORTHO05D000285 8.7e-06 55.1 86 34.9
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 8.7e-06 55.1 52 50.0


User provided reference genes

Program Settings