Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029699.2 Cucumis melo HOM05D000017 ORTHO05D000013 2.1e-143 512.3 252 100.0
MELO3C033201.2 Cucumis melo HOM05D000017 ORTHO05D000013 1.3e-36 157.5 139 59.7
MELO3C035006.2 Cucumis melo HOM05D000017 ORTHO05D000013 5.5e-35 152.1 139 59.0
MELO3C029111.2 Cucumis melo HOM05D000017 ORTHO05D000013 2.4e-30 136.7 78 83.3
MELO3C034454.2 Cucumis melo HOM05D000017 ORTHO05D009980 3.9e-28 129.4 117 60.7
MELO3C032008.2 Cucumis melo HOM05D008649 ORTHO05D009980 4.7e-18 95.9 128 46.9
Sed0026366 Sechium edule HOM05D012603 ORTHO05D015630 5.2e-17 92.4 77 53.2
Sed0019710 Sechium edule HOM05D012603 ORTHO05D015630 2.6e-16 90.1 76 51.3
Sed0018247 Sechium edule HOM05D000017 ORTHO05D000013 4.4e-16 89.4 77 51.9
Sed0022763 Sechium edule HOM05D012603 ORTHO05D015630 9.8e-16 88.2 77 51.9
Sed0013336 Sechium edule HOM05D012603 ORTHO05D015630 1.9e-14 84.0 77 50.6
MELO3C030271.2 Cucumis melo HOM05D000017 ORTHO05D000013 7.1e-14 82.0 77 48.1
CANSAT35G1386 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-12 76.6 82 40.2
MELO3C000645.2 Cucumis melo HOM05D000017 ORTHO05D000013 8.6e-12 75.1 67 49.3
CANSAT80G0400 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-11 74.7 146 28.8
MELO3C028466.2 Cucumis melo HOM05D000017 ORTHO05D000013 4.3e-11 72.8 116 36.2
CANSAT64G1942 Cannabis sativa HOM05D000017 ORTHO05D000013 2.8e-10 70.1 80 41.2
CANSAT11G1017 Cannabis sativa HOM05D000017 ORTHO05D000013 3.6e-10 69.7 82 40.2
CANSAT64G0496 Cannabis sativa HOM05D000017 ORTHO05D000013 3.6e-10 69.7 82 40.2
CANSAT01G2928 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-09 67.0 82 35.4
CANSAT56G3267 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-09 67.0 82 35.4
CANSAT64G0736 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-09 67.0 82 35.4
CANSAT54G2185 Cannabis sativa HOM05D000017 ORTHO05D000013 4.0e-09 66.2 82 40.2
Atru.chr12.1233 Acer truncatum HOM05D000017 ORTHO05D000013 5.2e-09 65.9 173 26.6
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 5.2e-09 65.9 82 40.2
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 5.2e-09 65.9 80 41.2
CANSAT21G0637 Cannabis sativa HOM05D000017 ORTHO05D000013 6.8e-09 65.5 79 41.8
Oeu005507.1 Olea europaea HOM05D000017 ORTHO05D000013 6.8e-09 65.5 76 36.8
TWI12G1375 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.2e-08 64.7 213 26.3
Atru.chr2.454 Acer truncatum HOM05D000017 ORTHO05D000013 1.5e-08 64.3 71 45.1
TWI53G1455 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.6e-08 63.5 213 25.8
TWI38G2350 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.4e-08 63.2 213 25.8
Atru.chr6.42 Acer truncatum HOM05D000017 ORTHO05D000013 4.4e-08 62.8 187 26.2
Atru.chr9.134 Acer truncatum HOM05D000017 ORTHO05D000013 4.4e-08 62.8 167 27.5
CANSAT78G0171 Cannabis sativa HOM05D000017 ORTHO05D000013 7.6e-08 62.0 82 35.4
Oeu041029.1 Olea europaea HOM05D000017 ORTHO05D000013 7.6e-08 62.0 69 42.0
CANSAT21G2295 Cannabis sativa HOM05D000017 ORTHO05D000013 9.9e-08 61.6 151 26.5
Oeu007458.1 Olea europaea HOM05D000017 ORTHO05D000013 9.9e-08 61.6 66 39.4
CANSAT11G1015 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-07 61.2 79 35.4
TWI18G0182 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.3e-07 61.2 186 26.3
CANSAT01G2148 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-07 60.8 141 28.4
Oeu009175.1 Olea europaea HOM05D000017 ORTHO05D000013 1.7e-07 60.8 66 40.9
ECA247G1560 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.2e-07 60.5 86 40.7
Hma1.2p1_0787F.1_g217970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.2e-07 60.5 86 36.0
Atru.chr2.2585 Acer truncatum HOM05D000017 ORTHO05D000013 2.9e-07 60.1 77 36.4
Oeu019780.1 Olea europaea HOM05D000017 ORTHO05D000013 2.9e-07 60.1 69 40.6
Atru.chr8.859 Acer truncatum HOM05D000017 ORTHO05D000013 3.7e-07 59.7 71 40.8
ECA232G0445 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.7e-07 59.7 86 39.5
Hma1.2p1_1793F.1_g302600 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.7e-07 59.7 86 36.0
TWI53G0141 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.7e-07 59.7 175 27.4
CANSAT25G2758 Cannabis sativa HOM05D000017 ORTHO05D000013 4.9e-07 59.3 73 35.6
MELO3C031467.2 Cucumis melo HOM05D000017 ORTHO05D000013 8.3e-07 58.5 115 32.2
MBI15_g19420_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 8.3e-07 58.5 188 25.5
Sopen05g015880 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-06 57.4 82 36.6
Sopen12g022630 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-06 57.4 82 36.6
Sopen06g011940 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-06 56.6 81 35.8
Atru.chr1.2031 Acer truncatum HOM05D000017 ORTHO05D000013 4.1e-06 56.2 77 33.8
Atru.chr3.3437 Acer truncatum HOM05D000017 ORTHO05D000013 5.4e-06 55.8 187 24.1
MELO3C030515.2 Cucumis melo HOM05D030739 ORTHO05D034965 5.4e-06 55.8 73 38.4
Atru.chr4.524 Acer truncatum HOM05D000017 ORTHO05D000013 7.1e-06 55.5 77 35.1
CANSAT25G1858 Cannabis sativa HOM05D000017 ORTHO05D000013 9.2e-06 55.1 81 37.0
CANSAT78G2065 Cannabis sativa HOM05D000017 ORTHO05D000013 9.2e-06 55.1 84 32.1
Cc11_g04540 Coffea canephora HOM05D000017 ORTHO05D013311 9.2e-06 55.1 85 37.6
Oeu029701.1 Olea europaea HOM05D000017 ORTHO05D000013 9.2e-06 55.1 72 40.3


User provided reference genes

Program Settings