Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029685.2 Cucumis melo HOM05D000539 ORTHO05D016267 1.1e-101 373.2 176 100.0
MELO3C028520.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.8e-33 146.0 94 72.3
MELO3C032017.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.1e-32 142.5 82 79.3
MELO3C030592.2 Cucumis melo HOM05D000539 ORTHO05D000233 4.0e-32 142.1 82 79.3
MELO3C027269.2 Cucumis melo HOM05D000036 ORTHO05D000592 1.2e-31 140.6 78 79.5
MELO3C028275.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.2e-28 130.6 107 63.6
MELO3C028643.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.7e-28 129.4 114 57.0
MELO3C033511.2 Cucumis melo HOM05D000539 ORTHO05D000592 4.6e-28 128.6 122 54.9
MELO3C035055.2 Cucumis melo HOM05D000004 ORTHO05D000002 4.6e-28 128.6 110 60.0
MELO3C034611.2 Cucumis melo HOM05D000539 ORTHO05D000233 6.6e-27 124.8 102 60.8
MELO3C034786.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.1e-26 124.0 113 55.8
MELO3C028785.2 Cucumis melo HOM05D000539 ORTHO05D000233 3.3e-26 122.5 115 53.9
MELO3C034193.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.6e-25 120.2 114 54.4
MELO3C033645.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.1e-25 119.8 114 55.3
MELO3C027653.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.8e-25 119.4 88 68.2
MELO3C034533.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.7e-20 102.8 105 53.3
MELO3C031421.2 Cucumis melo HOM05D007786 ORTHO05D000592 9.6e-18 94.4 62 66.1
MELO3C027740.2 Cucumis melo HOM05D000211 ORTHO05D011198 1.8e-16 90.1 52 78.8
Sed0019136 Sechium edule HOM05D000539 ORTHO05D000233 6.9e-16 88.2 82 47.6
Sed0016258 Sechium edule HOM05D000539 ORTHO05D000233 2.6e-15 86.3 79 44.3
CsaV3_3G021730 Cucumis sativus L. HOM05D000539 ORTHO05D000592 3.4e-15 85.9 55 67.3
MELO3C027923.2 Cucumis melo HOM05D000539 ORTHO05D000592 5.8e-15 85.1 117 44.4
MELO3C001574.2 Cucumis melo HOM05D000539 ORTHO05D000592 9.9e-15 84.3 116 36.2
Sed0025490 Sechium edule HOM05D000539 ORTHO05D000592 9.9e-15 84.3 99 39.4
Sed0026544 Sechium edule HOM05D000539 ORTHO05D000592 2.2e-14 83.2 99 38.4
MELO3C033325.2 Cucumis melo HOM05D000539 ORTHO05D000592 4.9e-14 82.0 48 75.0
CsaV3_1G045370 Cucumis sativus L. HOM05D000539 ORTHO05D000592 8.4e-14 81.3 118 40.7
CsaV3_UNG238520 Cucumis sativus L. HOM05D000539 ORTHO05D000592 1.1e-13 80.9 170 34.1
Sed0024905 Sechium edule HOM05D000539 ORTHO05D000592 1.1e-13 80.9 99 37.4
Sed0014463 Sechium edule HOM05D000539 ORTHO05D000592 1.4e-13 80.5 72 40.3
CsaV3_6G018870 Cucumis sativus L. HOM05D000539 ORTHO05D000592 2.4e-13 79.7 117 40.2
MELO3C030161.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.2e-13 79.3 104 36.5
MELO3C029090.2 Cucumis melo HOM05D008781 ORTHO05D000592 4.2e-13 79.0 113 42.5
MELO3C033118.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.1e-12 76.6 39 87.2
MELO3C033328.2 Cucumis melo HOM05D007786 ORTHO05D009980 3.5e-12 75.9 162 33.3
MELO3C033940.2 Cucumis melo HOM05D000539 ORTHO05D000592 4.6e-12 75.5 44 77.3
MELO3C000336.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.3e-11 73.9 37 86.5
MELO3C028463.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.3e-11 73.9 37 86.5
MELO3C029948.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.3e-11 73.9 37 86.5
MELO3C030218.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.8e-11 73.6 148 36.5
MELO3C030038.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.0e-11 72.8 115 35.7
MELO3C034471.2 Cucumis melo HOM05D007786 ORTHO05D009980 3.0e-11 72.8 37 86.5
MELO3C033315.2 Cucumis melo HOM05D007786 ORTHO05D009980 8.7e-11 71.2 33 93.9
MELO3C035111.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.5e-10 69.7 35 88.6
MELO3C034178.2 Cucumis melo HOM05D000539 ORTHO05D000233 3.3e-10 69.3 37 81.1
MELO3C035686.2 Cucumis melo HOM05D007110 ORTHO05D000592 4.3e-10 68.9 35 88.6
MELO3C030157.2 Cucumis melo HOM05D008649 ORTHO05D009980 5.6e-10 68.6 45 71.1
MELO3C035078.2 Cucumis melo HOM05D007786 ORTHO05D016267 7.4e-10 68.2 170 31.2
MELO3C033862.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.6e-09 67.0 34 85.3
MELO3C032570.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.1e-09 66.6 36 77.8
MELO3C030202.2 Cucumis melo HOM05D007786 ORTHO05D168257 2.8e-09 66.2 36 83.3
MELO3C032025.2 Cucumis melo HOM05D013245 ORTHO05D000592 3.7e-09 65.9 40 72.5
MELO3C032139.2 Cucumis melo HOM05D007786 ORTHO05D009980 3.7e-09 65.9 32 90.6
CsaV3_6G018650 Cucumis sativus L. HOM05D047073 ORTHO05D034978 4.8e-09 65.5 34 82.4
MELO3C027901.2 Cucumis melo HOM05D007786 ORTHO05D167100 1.1e-08 64.3 30 96.7
MELO3C032097.2 Cucumis melo HOM05D000433 ORTHO05D000443 1.4e-08 63.9 32 87.5
MELO3C027603.2 Cucumis melo HOM05D007786 ORTHO05D016267 1.8e-08 63.5 29 100.0
MELO3C033308.2 Cucumis melo HOM05D007786 ORTHO05D009980 1.8e-08 63.5 29 100.0
CsaV3_4G007110 Cucumis sativus L. HOM05D000539 ORTHO05D000233 1.8e-08 63.5 112 31.2
HanXRQChr10g0317561 Helianthus annuus HOM05D000539 ORTHO05D000592 1.8e-08 63.5 140 25.7
HanXRQChr09g0262931 Helianthus annuus HOM05D000539 ORTHO05D000592 2.4e-08 63.2 140 25.7
HanXRQChr14g0441961 Helianthus annuus HOM05D000539 ORTHO05D000592 2.4e-08 63.2 143 26.6
MELO3C028265.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.1e-08 62.8 52 46.2
MELO3C030153.2 Cucumis melo HOM05D007786 ORTHO05D167255 3.1e-08 62.8 36 86.1
MELO3C033953.2 Cucumis melo HOM05D000539 ORTHO05D000592 4.0e-08 62.4 35 82.9
MELO3C034433.2 Cucumis melo HOM05D000539 ORTHO05D166960 4.0e-08 62.4 45 64.4
MELO3C031428.2 Cucumis melo HOM05D000539 ORTHO05D000592 5.3e-08 62.0 122 30.3
MELO3C033733.2 Cucumis melo HOM05D000004 ORTHO05D000224 5.3e-08 62.0 33 87.9
MELO3C034305.2 Cucumis melo HOM05D000539 ORTHO05D000592 5.3e-08 62.0 85 40.0
MELO3C028501.2 Cucumis melo HOM05D008622 ORTHO05D010757 6.9e-08 61.6 30 93.3
MELO3C032029.2 Cucumis melo HOM05D000539 ORTHO05D000592 6.9e-08 61.6 112 32.1
MELO3C028781.2 Cucumis melo HOM05D000539 ORTHO05D034978 9.0e-08 61.2 32 84.4
MELO3C033907.2 Cucumis melo HOM05D009894 ORTHO05D013589 1.2e-07 60.8 83 38.6
MELO3C016215.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.5e-07 60.5 112 28.6
MELO3C032093.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.5e-07 60.5 112 33.0
MELO3C034345.2 Cucumis melo HOM05D007786 ORTHO05D009980 2.6e-07 59.7 30 86.7
MELO3C027629.2 Cucumis melo HOM05D007786 ORTHO05D016267 3.4e-07 59.3 27 100.0
MELO3C029581.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.4e-07 59.3 32 87.5
RcHm_v2.0_Chr3g0482291 Rosa chinensis HOM05D000539 ORTHO05D000592 3.4e-07 59.3 116 31.9
RcHm_v2.0_Chr4g0390571 Rosa chinensis HOM05D000539 ORTHO05D000592 3.4e-07 59.3 117 31.6
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 3.4e-07 59.3 116 31.9
MELO3C033140.2 Cucumis melo HOM05D000539 ORTHO05D000592 5.8e-07 58.5 83 41.0
MELO3C030851.2 Cucumis melo HOM05D000539 ORTHO05D000592 7.6e-07 58.2 95 34.7
MELO3C031553.2 Cucumis melo HOM05D013245 ORTHO05D000592 7.6e-07 58.2 35 62.9
CsaV3_6G015720 Cucumis sativus L. HOM05D000539 ORTHO05D000592 7.6e-07 58.2 36 69.4
RcHm_v2.0_Chr1g0318241 Rosa chinensis HOM05D000539 ORTHO05D000592 9.9e-07 57.8 116 31.9
MELO3C029067.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.3e-06 57.4 113 29.2
MELO3C031429.2 Cucumis melo HOM05D007786 ORTHO05D016267 1.3e-06 57.4 29 89.7
ECA240G4466 Erigeron canadensis HOM05D000539 ORTHO05D000233 1.3e-06 57.4 119 28.6
MELO3C028565.2 Cucumis melo HOM05D003026 ORTHO05D000667 1.7e-06 57.0 38 73.7
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.7e-06 57.0 132 24.2
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.7e-06 57.0 132 24.2
MELO3C028504.2 Cucumis melo HOM05D007786 ORTHO05D000224 2.2e-06 56.6 28 92.9
MELO3C030154.2 Cucumis melo HOM05D000004 ORTHO05D000002 2.2e-06 56.6 31 83.9
MELO3C032063.2 Cucumis melo HOM05D013245 ORTHO05D000592 2.2e-06 56.6 34 61.8
MELO3C032110.2 Cucumis melo HOM05D007786 ORTHO05D000224 2.2e-06 56.6 35 77.1
MELO3C033371.2 Cucumis melo HOM05D007786 ORTHO05D016267 2.2e-06 56.6 29 89.7
MELO3C033921.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.2e-06 56.6 113 30.1
RhsimUnG0164900 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.2e-06 56.6 114 26.3
MELO3C033275.2 Cucumis melo HOM05D013245 ORTHO05D000592 2.9e-06 56.2 35 65.7
MELO3C034746.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.9e-06 56.2 77 36.4
CsaV3_1G030690 Cucumis sativus L. HOM05D000539 ORTHO05D000592 2.9e-06 56.2 35 65.7
MELO3C035139.2 Cucumis melo HOM05D007786 ORTHO05D169200 6.4e-06 55.1 29 86.2
ECA236G3736 Erigeron canadensis HOM05D000539 ORTHO05D000233 6.4e-06 55.1 115 28.7
MELO3C028085.2 Cucumis melo HOM05D007786 ORTHO05D016267 8.4e-06 54.7 57 50.9
Sed0025775 Sechium edule HOM05D007110 ORTHO05D000592 8.4e-06 54.7 35 57.1


User provided reference genes

Program Settings