Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029660.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.8e-73 278.5 136 100.0
MELO3C031197.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.8e-64 249.2 132 88.6
MELO3C032792.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.4e-63 244.6 132 87.1
MELO3C029643.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.0e-59 233.4 128 89.8
MELO3C029711.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.3e-59 233.0 132 84.1
MELO3C030315.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.4e-53 211.1 136 70.6
MELO3C031511.2 Cucumis melo HOM05D007230 ORTHO05D004756 9.6e-50 200.3 102 93.1
MELO3C031996.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.3e-48 194.5 152 59.9
MELO3C030814.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.5e-47 193.0 107 86.0
MELO3C033490.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.6e-44 183.0 132 70.5
Psat0ss2585g0560 Pisum sativum HOM05D007230 ORTHO05D004756 4.0e-40 168.3 132 56.1
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 9.0e-40 167.2 132 56.1
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 1.5e-39 166.4 132 55.3
MELO3C033487.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.5e-39 164.9 154 55.2
Psat5g083840 Pisum sativum HOM05D007230 ORTHO05D004756 5.8e-39 164.5 132 54.5
MELO3C032119.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.7e-38 162.9 94 80.9
Psat2g117040 Pisum sativum HOM05D007230 ORTHO05D004756 2.2e-38 162.5 125 57.6
MELO3C030889.2 Cucumis melo HOM05D007230 ORTHO05D004756 2.9e-38 162.2 85 91.8
MELO3C032600.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.9e-37 159.5 85 91.8
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 7.1e-37 157.5 139 51.8
Psat0ss1196g0040 Pisum sativum HOM05D007230 ORTHO05D004756 9.3e-37 157.1 125 56.8
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.5e-36 155.2 135 53.3
MELO3C029746.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.1e-34 150.2 76 92.1
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.1e-34 150.2 139 49.6
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.6e-34 147.9 139 49.6
MELO3C029164.2 Cucumis melo HOM05D007230 ORTHO05D004756 7.4e-34 147.5 73 97.3
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.1e-33 146.0 135 49.6
Rhsim12G0049700 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.7e-33 145.2 139 47.5
MELO3C029851.2 Cucumis melo HOM05D007230 ORTHO05D004756 7.6e-31 137.5 73 90.4
Psat0s1792g0040 Pisum sativum HOM05D000659 ORTHO05D000505 1.3e-30 136.7 104 58.7
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 6.0e-28 127.9 135 47.4
MELO3C033139.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.3e-27 126.7 152 42.8
Rhsim10G0179600 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.5e-26 122.5 110 50.0
Psat5g096800 Pisum sativum HOM05D007230 ORTHO05D004756 9.0e-24 114.0 94 58.5
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 2.6e-23 112.5 134 42.5
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 3.4e-23 112.1 134 40.3
Rhsim05G0139800 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.9e-23 111.3 89 57.3
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 7.6e-23 110.9 134 40.3
CSS0018761 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.0e-22 110.5 96 53.1
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 1.0e-22 110.5 134 39.6
CSS0042171 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.1e-21 107.1 94 52.1
CSS0001150 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.2e-21 105.5 95 52.6
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.2e-21 105.5 121 46.3
CSS0041454 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.5e-21 104.8 106 41.5
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.5e-21 104.8 121 46.3
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 5.5e-21 104.8 121 46.3
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.2e-20 103.6 121 46.3
MELO3C035463.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.2e-20 103.6 75 62.7
CSS0002016 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.1e-20 102.8 92 51.1
CSS0009610 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.1e-20 102.8 96 52.1
CSS0047666 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 4.6e-20 101.7 96 51.0
PSO478G2157 Papaver somniferum HOM05D007230 ORTHO05D004756 1.0e-19 100.5 132 36.4
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.4e-19 100.1 131 43.5
CSS0025354 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.8e-19 99.8 92 50.0
CSS0035882 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.8e-19 99.8 92 50.0
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 3.9e-19 98.6 101 45.5
CSS0046979 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 8.8e-19 97.4 92 51.1
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 8.8e-19 97.4 131 36.6
Rhsim12G0018900 Rhododendron simsii HOM05D007230 ORTHO05D004756 8.8e-19 97.4 70 62.9
Psat5g096840 Pisum sativum HOM05D007230 ORTHO05D004756 1.1e-18 97.1 72 55.6
QL11p002299 Quercus lobata HOM05D000002 ORTHO05D000001 3.3e-18 95.5 146 37.7
QL03p000720 Quercus lobata HOM05D000002 ORTHO05D000001 4.3e-18 95.1 146 37.7
QL11p048818 Quercus lobata HOM05D000002 ORTHO05D000001 4.3e-18 95.1 146 37.7
QL01p026368 Quercus lobata HOM05D000002 ORTHO05D000001 5.7e-18 94.7 146 37.7
QL04p089373 Quercus lobata HOM05D000002 ORTHO05D000001 5.7e-18 94.7 149 37.6
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 1.3e-17 93.6 145 37.2
Psat4g177800 Pisum sativum HOM05D007230 ORTHO05D004756 3.1e-16 89.0 66 60.6
PSO339G3339 Papaver somniferum HOM05D007230 ORTHO05D004756 4.1e-16 88.6 131 35.1
Psat1g072080 Pisum sativum HOM05D007230 ORTHO05D004756 6.9e-16 87.8 69 55.1
PSO339G5468 Papaver somniferum HOM05D007230 ORTHO05D004756 1.2e-15 87.0 123 35.8
QL06p036226 Quercus lobata HOM05D000002 ORTHO05D000001 1.5e-15 86.7 138 37.0
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 2.9e-14 82.4 103 40.8
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 1.9e-13 79.7 123 34.1
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 2.5e-13 79.3 115 35.7
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 3.2e-13 79.0 115 35.7
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-13 79.0 115 35.7
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-13 79.0 122 33.6
MD02G1156200 Malus domestica HOM05D000002 ORTHO05D004756 7.2e-13 77.8 122 32.0
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 7.2e-13 77.8 115 34.8
PSO170G1977 Papaver somniferum HOM05D000002 ORTHO05D000001 9.4e-13 77.4 105 37.1
PSO782G2577 Papaver somniferum HOM05D000002 ORTHO05D004756 9.4e-13 77.4 123 33.3
QL09p045529 Quercus lobata HOM05D000002 ORTHO05D000001 1.2e-12 77.0 97 38.1
CSS0008768 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.6e-12 76.6 116 31.9
SHI31375 Sapria himalayana HOM05D007230 ORTHO05D004756 1.6e-12 76.6 115 34.8
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 2.7e-12 75.9 115 34.8
QL05p073015 Quercus lobata HOM05D000002 ORTHO05D000001 4.7e-12 75.1 126 35.7
SHI30625 Sapria himalayana HOM05D007230 ORTHO05D004756 4.7e-12 75.1 95 42.1
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 6.1e-12 74.7 112 31.2
PSO754G0013 Papaver somniferum HOM05D007230 ORTHO05D004756 3.0e-11 72.4 123 32.5
QL04p092122 Quercus lobata HOM05D000002 ORTHO05D000001 5.1e-11 71.6 80 41.2
COL.COLO4_34392 Corchorus olitorius HOM05D007230 ORTHO05D004756 1.1e-10 70.5 60 50.0
CSS0009938 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 9.7e-10 67.4 63 50.8
Psat1g057080 Pisum sativum HOM05D007230 ORTHO05D004756 1.7e-09 66.6 56 55.4
PSO541G0667 Papaver somniferum HOM05D000002 ORTHO05D000047 6.3e-09 64.7 120 31.7
SHI40782 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-09 64.7 115 33.9
MELO3C031455.2 Cucumis melo HOM05D007230 ORTHO05D004756 8.2e-09 64.3 38 73.7
COL.COLO4_03834 Corchorus olitorius HOM05D000002 ORTHO05D000047 1.1e-08 63.9 116 28.4
Sp5g25877 Schrenkiella parvula HOM05D000002 ORTHO05D000047 1.1e-08 63.9 112 32.1
PSO144G0017 Papaver somniferum HOM05D007230 ORTHO05D004756 1.8e-08 63.2 105 32.4
CSS0049413 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.4e-08 62.8 63 49.2
PSO675G4473 Papaver somniferum HOM05D000002 ORTHO05D000001 2.4e-08 62.8 119 29.4
Psat1g039640 Pisum sativum HOM05D000002 ORTHO05D000047 2.4e-08 62.8 115 30.4
CSS0034832 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-08 62.4 124 27.4
PGR142G0044 Punica granatum HOM05D000002 ORTHO05D000047 3.1e-08 62.4 126 31.0
PSO782G0932 Papaver somniferum HOM05D000002 ORTHO05D000047 4.1e-08 62.0 118 32.2
AUR62032538 Chenopodium quinoa HOM05D000025 ORTHO05D000047 7.0e-08 61.2 114 28.1
Manes.18G145666 Manihot esculenta HOM05D000002 ORTHO05D000047 9.1e-08 60.8 123 30.1
TPR.G24908 Trifolium pratense HOM05D000030 ORTHO05D000031 9.1e-08 60.8 91 30.8
CSS0040737 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-07 60.5 101 32.7
THA.LOC104804236 Tarenaya hassleriana HOM05D000002 ORTHO05D000047 1.2e-07 60.5 112 30.4
CSS0005755 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-07 60.1 127 29.1
PSO832G3260 Papaver somniferum HOM05D000002 ORTHO05D000047 1.5e-07 60.1 120 30.0
Psat6g204680 Pisum sativum HOM05D000002 ORTHO05D000047 1.5e-07 60.1 112 29.5
SHI26640 Sapria himalayana HOM05D007230 ORTHO05D004756 1.5e-07 60.1 99 33.3
Actinidia05629 Actinidia chinensis HOM05D007230 ORTHO05D004756 2.0e-07 59.7 73 38.4
Ca_11532_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 2.0e-07 59.7 112 31.2
PSO017G3933 Papaver somniferum HOM05D000002 ORTHO05D000047 2.0e-07 59.7 119 29.4
PSO423G0187 Papaver somniferum HOM05D000002 ORTHO05D000047 2.0e-07 59.7 112 32.1
SHI02527 Sapria himalayana HOM05D007230 ORTHO05D004756 4.5e-07 58.5 95 31.6
TPR.G16078 Trifolium pratense HOM05D000002 ORTHO05D000047 4.5e-07 58.5 122 28.7
COL.COLO4_20910 Corchorus olitorius HOM05D000002 ORTHO05D004756 5.9e-07 58.2 90 28.9
CSS0045631 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-06 57.4 125 28.0
THA.LOC104821333 Tarenaya hassleriana HOM05D000002 ORTHO05D000047 1.0e-06 57.4 112 30.4
PSO675G3262 Papaver somniferum HOM05D000002 ORTHO05D000001 1.3e-06 57.0 114 31.6
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 57.0 85 34.1
THA.LOC104823078 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.3e-06 57.0 122 27.0
CSS0020834 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-06 56.6 133 27.1
Hma1.2p1_0046F.1_g026950 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-06 56.6 115 31.3
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 1.7e-06 56.6 76 44.7
Sabra03G0006700 Salix brachista HOM05D000002 ORTHO05D000047 1.7e-06 56.6 125 26.4
Sabra05G0166200 Salix brachista HOM05D000002 ORTHO05D000047 1.7e-06 56.6 125 26.4
Sabra05G0166300 Salix brachista HOM05D000002 ORTHO05D000047 1.7e-06 56.6 125 26.4
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 1.7e-06 56.6 126 27.0
THA.LOC104822774 Tarenaya hassleriana HOM05D000002 ORTHO05D000047 1.7e-06 56.6 112 28.6
Cpa.g.sc12.264 Carica papaya HOM05D000002 ORTHO05D000047 2.2e-06 56.2 116 28.4
AUR62010530 Chenopodium quinoa HOM05D000002 ORTHO05D000047 2.2e-06 56.2 112 27.7
Psat1g056400 Pisum sativum HOM05D000002 ORTHO05D000047 2.2e-06 56.2 96 28.1
Psat5g072720 Pisum sativum HOM05D000002 ORTHO05D000047 2.2e-06 56.2 123 21.1
Rhsim10G0196500 Rhododendron simsii HOM05D000002 ORTHO05D000047 2.2e-06 56.2 125 24.0
Sabra17G0101800 Salix brachista HOM05D000002 ORTHO05D000001 2.2e-06 56.2 119 31.1
TPR.G24210 Trifolium pratense HOM05D000002 ORTHO05D000047 2.2e-06 56.2 117 28.2
TPR.G343 Trifolium pratense HOM05D000002 ORTHO05D000047 2.2e-06 56.2 123 26.8
Lj1g0019835 Lotus japonicus HOM05D000002 ORTHO05D000047 2.9e-06 55.8 112 29.5
PSO111G0103 Papaver somniferum HOM05D000002 ORTHO05D000001 2.9e-06 55.8 118 27.1
Sabra18G0123800 Salix brachista HOM05D000002 ORTHO05D000047 2.9e-06 55.8 125 26.4
Hma1.2p1_0222F.1_g093830 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.8e-06 55.5 116 28.4
Hma1.2p1_0384F.1_g140880 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.8e-06 55.5 115 27.8
Sabra16G0104200 Salix brachista HOM05D000002 ORTHO05D000001 3.8e-06 55.5 119 31.1
Sopen00g011290 Solanum pennellii HOM05D000002 ORTHO05D000001 3.8e-06 55.5 126 30.2
Sopen01g008270 Solanum pennellii HOM05D000002 ORTHO05D000001 3.8e-06 55.5 126 30.2
Sopen01g027760 Solanum pennellii HOM05D000002 ORTHO05D000001 3.8e-06 55.5 126 30.2
Sopen06g016800 Solanum pennellii HOM05D000002 ORTHO05D000047 3.8e-06 55.5 126 30.2
Ciclev10024522m.g Citrus clementina HOM05D000002 ORTHO05D000047 5.0e-06 55.1 123 26.8
PSO063G5787 Papaver somniferum HOM05D000002 ORTHO05D000047 5.0e-06 55.1 118 26.3
Rhsim11G0163200 Rhododendron simsii HOM05D000002 ORTHO05D000047 5.0e-06 55.1 125 27.2
Sabra17G0116000 Salix brachista HOM05D000002 ORTHO05D000047 5.0e-06 55.1 125 25.6
THA.LOC104798893 Tarenaya hassleriana HOM05D000002 ORTHO05D000047 5.0e-06 55.1 112 29.5
CANSAT80G2584 Cannabis sativa HOM05D000002 ORTHO05D000047 6.5e-06 54.7 112 25.9
SHI01914 Sapria himalayana HOM05D000002 ORTHO05D000047 6.5e-06 54.7 115 27.8
AUR62024197 Chenopodium quinoa HOM05D000002 ORTHO05D000047 8.5e-06 54.3 92 29.3
Sabra12G0082000 Salix brachista HOM05D000002 ORTHO05D000047 8.5e-06 54.3 122 27.0


User provided reference genes

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