Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029596.2 Cucumis melo HOM05D009184 ORTHO05D000004 7.1e-92 340.5 162 100.0
MELO3C033412.2 Cucumis melo HOM05D009184 ORTHO05D000004 4.4e-17 92.0 101 49.5
ClCG11G007040 Citrullus lanatus HOM05D000003 ORTHO05D000014 5.0e-13 78.6 68 57.4
CSS0043417 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-11 73.6 92 37.0
MD02G1293300 Malus domestica HOM05D000003 ORTHO05D000004 3.0e-10 69.3 113 36.3
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 4.0e-10 68.9 110 34.5
ClCG06G000020 Citrullus lanatus HOM05D009184 ORTHO05D000004 2.0e-09 66.6 92 35.9
CSS0033313 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.4e-09 65.9 77 37.7
CANSAT35G1373 Cannabis sativa HOM05D000003 ORTHO05D000004 3.4e-09 65.9 99 32.3
CANSAT54G1054 Cannabis sativa HOM05D000003 ORTHO05D000004 3.4e-09 65.9 99 32.3
ClCG03G011420 Citrullus lanatus HOM05D009184 ORTHO05D001339 5.7e-09 65.1 78 41.0
PSO478G4776 Papaver somniferum HOM05D000003 ORTHO05D000004 2.2e-08 63.2 116 34.5
PSO699G0064 Papaver somniferum HOM05D000003 ORTHO05D000004 2.8e-08 62.8 103 34.0
Sed0026271 Sechium edule HOM05D000003 ORTHO05D000006 2.8e-08 62.8 81 37.0
MELO3C028606.2 Cucumis melo HOM05D000003 ORTHO05D016241 8.3e-08 61.2 109 32.1
Aqoxy5G04099 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.1e-07 60.8 140 29.3
ClCG06G006960 Citrullus lanatus HOM05D008623 ORTHO05D000004 1.1e-07 60.8 64 35.9
PSO423G0162 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-07 60.8 106 36.8
PSO724G0774 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-07 60.8 111 36.0
PSO421G0329 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-07 60.5 100 37.0
Aqoxy1G02451 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.8e-07 60.1 133 31.6
Aqoxy2G03655 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.8e-07 60.1 92 35.9
Aqoxy4G00589 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.8e-07 60.1 92 35.9
Aqoxy4G01058 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.8e-07 60.1 92 35.9
PSO063G3902 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-07 60.1 110 35.5
QL02p081065 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-07 59.7 114 33.3
QL06p005440 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-07 59.7 111 33.3
PSO675G4334 Papaver somniferum HOM05D000003 ORTHO05D000004 4.1e-07 58.9 98 33.7
PSO713G0019 Papaver somniferum HOM05D000003 ORTHO05D000004 4.1e-07 58.9 103 32.0
Atru.chr8.2073 Acer truncatum HOM05D000003 ORTHO05D000004 7.0e-07 58.2 84 36.9
Aqoxy1G02689 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.0e-07 58.2 82 39.0
MELO3C022264.2 Cucumis melo HOM05D000003 ORTHO05D000004 7.0e-07 58.2 69 36.2
MBI17_g44064_MAGBIO Magnolia biondii HOM05D000516 ORTHO05D000409 9.2e-07 57.8 128 28.1
PSO081G0047 Papaver somniferum HOM05D000003 ORTHO05D001026 9.2e-07 57.8 95 33.7
CANSAT54G2053 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-06 57.4 99 33.3
FvH4_5g35851 Fragaria vesca HOM05D000003 ORTHO05D000022 1.6e-06 57.0 82 34.1
Aqoxy7G01788 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.7e-06 56.2 65 41.5
CANSAT25G1317 Cannabis sativa HOM05D000003 ORTHO05D000004 2.7e-06 56.2 99 33.3
CANSAT78G2405 Cannabis sativa HOM05D000003 ORTHO05D000004 2.7e-06 56.2 90 34.4
FvH4_6g25500 Fragaria vesca HOM05D000003 ORTHO05D000007 2.7e-06 56.2 98 35.7
Sed0025575 Sechium edule HOM05D008623 ORTHO05D007789 2.7e-06 56.2 52 42.3
Atru.chr7.919 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-06 55.8 114 31.6
Aqoxy7G02192 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.5e-06 55.8 102 32.4
QL10p042354 Quercus lobata HOM05D002009 ORTHO05D005728 3.5e-06 55.8 108 32.4
Aqoxy1G03600 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 4.5e-06 55.5 102 30.4
CANSAT56G2299 Cannabis sativa HOM05D000003 ORTHO05D000004 4.5e-06 55.5 102 35.3
Sopen00g005320 Solanum pennellii HOM05D000003 ORTHO05D000004 4.5e-06 55.5 77 37.7
Atru.chr11.644 Acer truncatum HOM05D000003 ORTHO05D000004 5.9e-06 55.1 85 32.9
PSO079G0068 Papaver somniferum HOM05D000003 ORTHO05D000004 5.9e-06 55.1 111 36.0
Hund02492 Selenicereus undatus HOM05D000003 ORTHO05D000004 5.9e-06 55.1 83 37.3
Hund09829 Selenicereus undatus HOM05D000003 ORTHO05D000004 5.9e-06 55.1 83 37.3
Aqoxy4G01216 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.7e-06 54.7 78 37.2
Hund04195 Selenicereus undatus HOM05D000877 ORTHO05D000004 7.7e-06 54.7 83 37.3


User provided reference genes

Program Settings