Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 0.0e+00 2228.8 1154 100.0
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 0.0e+00 1871.7 1182 82.4
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 0.0e+00 1802.3 1143 83.1
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 0.0e+00 1694.9 1122 76.6
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 2.9e-304 1048.9 1138 51.1
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 1.1e-290 1003.8 1224 47.8
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 1.1e-290 1003.8 1142 49.6
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 1.9e-276 956.4 1142 47.2
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 3.8e-272 942.2 1150 47.3
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 1.1e-266 924.1 1142 45.6
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 1.4e-266 923.7 1144 46.0
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 6.9e-266 921.4 1137 45.6
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 4.5e-265 918.7 1138 46.5
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 2.2e-264 916.4 1122 46.7
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 5.0e-264 915.2 1138 45.9
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 3.2e-263 912.5 1143 45.5
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 3.2e-263 912.5 1140 46.3
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 7.2e-263 911.4 1142 46.1
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 1.2e-262 910.6 1142 46.1
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 1.8e-261 906.7 1138 45.3
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 6.7e-261 904.8 1144 46.0
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 1.1e-258 897.5 1144 45.5
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 4.1e-258 895.6 1154 45.2
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 9.0e-258 894.4 1135 45.6
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 5.9e-257 891.7 1143 45.0
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 7.7e-257 891.3 1144 45.2
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.3e-256 890.6 1142 45.2
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 5.0e-256 888.6 1134 45.5
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 1.9e-255 886.7 1152 45.1
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 2.5e-255 886.3 1140 44.6
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 7.2e-255 884.8 1132 45.8
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 2.8e-235 819.7 1203 41.7
Atru.chr7.1950 Acer truncatum HOM05D007419 ORTHO05D009327 2.7e-230 803.1 973 47.5
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 4.8e-227 792.3 1037 44.4
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 2.7e-225 786.6 1249 40.1
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 2.9e-224 783.1 1168 40.9
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 2.9e-224 783.1 1129 42.4
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 4.2e-223 779.2 1125 41.9
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 8.0e-222 775.0 1134 41.1
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 2.0e-220 770.4 1092 42.1
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 2.6e-220 770.0 1127 41.6
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 3.7e-219 766.1 1138 42.2
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 1.2e-217 761.1 1133 41.5
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 5.6e-215 752.3 1131 40.5
GSVIVG01015591001 Vitis vinifera HOM05D007419 ORTHO05D009327 8.0e-214 748.4 863 49.0
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 4.9e-211 739.2 1135 39.3
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 2.0e-209 733.8 1151 40.1
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 7.8e-209 731.9 1115 39.6
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 1.9e-207 727.2 1177 39.1
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 5.8e-204 715.7 1128 38.5
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 2.2e-203 713.8 1129 38.9
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 5.4e-202 709.1 1117 40.2
Manes.06G047100 Manihot esculenta HOM05D007419 ORTHO05D009327 7.5e-196 688.7 817 47.5
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 1.7e-195 687.6 1118 38.6
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 3.0e-192 676.8 1128 37.8
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 1.1e-191 674.9 1137 39.0
vmacro07721 Vaccinium macrocarpon HOM05D007419 ORTHO05D009327 9.9e-188 661.8 1013 41.3
Psat4g039120 Pisum sativum HOM05D007419 ORTHO05D009327 3.2e-186 656.8 705 50.1
CAN.G1315.3 Capsicum annuum HOM05D007419 ORTHO05D009327 4.3e-183 646.4 1007 40.9
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 3.6e-182 643.3 1095 39.2
Actinidia21952 Actinidia chinensis HOM05D007419 ORTHO05D009327 9.9e-172 608.6 848 42.6
TWI34G0413 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 3.8e-171 606.7 1033 38.2
QL09p047989 Quercus lobata HOM05D007419 ORTHO05D009327 5.5e-162 576.2 928 39.3
Eucgr.C01385 Eucalyptus grandis HOM05D007419 ORTHO05D009327 1.1e-157 562.0 856 41.2
Sc08g0006270 Simmondsia chinensis HOM05D007419 ORTHO05D009327 4.0e-157 560.1 899 38.3
Gohir.D13G206200 Gossypium hirsutum HOM05D007419 ORTHO05D009327 3.4e-156 557.0 673 45.5
Nn8g39549 Nelumbo nucifera HOM05D007419 ORTHO05D009327 8.4e-155 552.4 858 39.3
ATR0800G079 Amborella trichopoda HOM05D007419 ORTHO05D009327 1.1e-151 542.0 1039 36.0
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 8.2e-150 535.8 1129 34.5
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 1.0e-144 518.8 1127 35.0
SEGI_05905 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.5e-143 515.0 1084 32.7
SEGI_33879 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 2.3e-136 491.1 1210 30.4
MBI15_g15110_MAGBIO Magnolia biondii HOM05D007419 ORTHO05D009327 2.9e-115 421.0 867 35.3
Os06g0173000 Oryza sativa ssp. japonica HOM05D007419 ORTHO05D009327 2.5e-114 417.9 1023 30.5
Hund26535 Selenicereus undatus HOM05D007419 ORTHO05D009327 5.7e-111 406.8 415 53.0
MD15G1167400 Malus domestica HOM05D007419 ORTHO05D009327 3.7e-102 377.5 301 65.1
AUR62011176 Chenopodium quinoa HOM05D007419 ORTHO05D009327 6.8e-88 330.1 316 56.0
Zm00001eb375320 Zea mays HOM05D007419 ORTHO05D009327 3.6e-73 281.2 843 28.8
SMO340G0190 Selaginella moellendorffii HOM05D007419 ORTHO05D009327 1.0e-67 263.1 1092 25.2
CAN.G778.5 Capsicum annuum HOM05D007419 ORTHO05D009327 6.4e-62 243.8 202 58.4
GSVIVG01015592001 Vitis vinifera HOM05D007419 ORTHO05D009327 2.1e-60 238.8 252 50.0
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 1.9e-58 232.3 415 36.1
Gohir.D13G206300 Gossypium hirsutum HOM05D007419 ORTHO05D009327 5.6e-58 230.7 277 46.2
Psat4g039080 Pisum sativum HOM05D007419 ORTHO05D009327 1.8e-56 225.7 331 41.7
QL09p046570 Quercus lobata HOM05D007419 ORTHO05D009327 4.6e-52 211.1 410 34.4
SEGI_04675 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.1e-50 206.5 413 33.2
Actinidia21951 Actinidia chinensis HOM05D007419 ORTHO05D009327 3.7e-49 201.4 252 46.4
TWI34G1676 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 9.0e-48 196.8 217 49.8
CSS0048092 Camellia sinensis var. sinensis HOM05D007419 ORTHO05D009327 8.4e-46 190.3 232 47.0
Oeu012224.2 Olea europaea HOM05D007419 ORTHO05D009327 1.1e-37 163.3 427 30.9
QL09p046488 Quercus lobata HOM05D007419 ORTHO05D009327 1.3e-33 149.8 158 52.5
QL09p046563 Quercus lobata HOM05D007419 ORTHO05D009327 1.3e-33 149.8 158 52.5
CBR_g6680 Chara braunii HOM05D007419 ORTHO05D009327 1.1e-32 146.7 275 33.1
EL10Ac8g18720 Beta vulgaris HOM05D007419 ORTHO05D009327 2.5e-29 135.6 154 46.8
Oeu038257.1 Olea europaea HOM05D007419 ORTHO05D009327 7.9e-28 130.6 221 39.4
MSTRG.26436 Avicennia marina HOM05D007419 ORTHO05D009327 8.8e-27 127.1 144 46.5
Eucgr.C01386 Eucalyptus grandis HOM05D007419 ORTHO05D009327 1.0e-22 113.6 164 38.4
MD08G1122800 Malus domestica HOM05D007419 ORTHO05D009327 6.5e-22 110.9 85 64.7
SEGI_28656 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 2.1e-20 105.9 836 20.5
Dinv10908 Davidia involucrata HOM05D007419 ORTHO05D009327 1.4e-16 93.2 114 43.0
Nn8g39545 Nelumbo nucifera HOM05D007419 ORTHO05D009327 1.9e-13 82.8 91 47.3


User provided reference genes

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