Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029442.2 Cucumis melo HOM05D011461 ORTHO05D003213 1.4e-36 155.6 71 100.0
MELO3C035254.2 Cucumis melo HOM05D011461 ORTHO05D003213 1.6e-32 142.1 71 87.3
MELO3C034165.2 Cucumis melo HOM05D011461 ORTHO05D003213 6.4e-29 130.2 71 81.7
MELO3C029378.2 Cucumis melo HOM05D011461 ORTHO05D003213 2.7e-27 124.8 71 77.5
MELO3C032443.2 Cucumis melo HOM05D011461 ORTHO05D003213 3.9e-26 120.9 71 74.6
MELO3C030406.2 Cucumis melo HOM05D011461 ORTHO05D003213 3.6e-24 114.4 71 73.2
MELO3C028675.2 Cucumis melo HOM05D011461 ORTHO05D003213 1.4e-23 112.5 64 78.1
MELO3C034232.2 Cucumis melo HOM05D011461 ORTHO05D003213 1.4e-23 112.5 70 72.9
MELO3C031108.2 Cucumis melo HOM05D011461 ORTHO05D003213 1.5e-22 109.0 57 80.7
MELO3C033122.2 Cucumis melo HOM05D011461 ORTHO05D003213 9.8e-22 106.3 56 80.4
MELO3C010327.2 Cucumis melo HOM05D000107 ORTHO05D000062 1.9e-20 102.1 68 64.7
MELO3C034883.2 Cucumis melo HOM05D011461 ORTHO05D003213 2.1e-19 98.6 55 76.4
MELO3C033077.2 Cucumis melo HOM05D011461 ORTHO05D003213 1.7e-18 95.5 63 66.7
MELO3C028709.2 Cucumis melo HOM05D011461 ORTHO05D003213 5.6e-17 90.5 48 81.2
MELO3C033743.2 Cucumis melo HOM05D011461 ORTHO05D003213 4.0e-15 84.3 48 75.0
MELO3C031723.2 Cucumis melo HOM05D011461 ORTHO05D003213 1.5e-14 82.4 52 71.2
MBI17_g17142_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.3e-13 79.3 69 46.4
MBI06_g42454_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D003213 8.3e-13 76.6 69 43.5
MBI11_g22671_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.2e-12 73.2 69 43.5
MBI18_g23349_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D003213 2.1e-11 72.0 66 43.9
MBI19_g30599_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.1e-11 72.0 69 43.5
MELO3C029231.2 Cucumis melo HOM05D001963 ORTHO05D003213 6.0e-11 70.5 38 81.6
MBI08_g15727_MAGBIO Magnolia biondii HOM05D000107 ORTHO05D003213 1.0e-10 69.7 69 42.0
CSS0022362 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-10 69.3 68 42.6
QL12p013571 Quercus lobata HOM05D000107 ORTHO05D000062 3.0e-10 68.2 70 38.6
CSS0003322 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.9e-10 67.8 68 44.1
CSS0012803 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.9e-10 67.8 68 44.1
CSS0024740 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.9e-10 67.8 68 44.1
CSS0032482 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.9e-10 67.8 68 44.1
CSS0047068 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.9e-10 67.8 68 44.1
CSS0048301 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.9e-10 67.8 68 44.1
PGR102G0480 Punica granatum HOM05D000107 ORTHO05D000062 3.9e-10 67.8 69 42.0
QL05p055903 Quercus lobata HOM05D000240 ORTHO05D003213 5.1e-10 67.4 69 42.0
MBI06_g15134_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.6e-10 67.0 69 37.7
MELO3C032774.2 Cucumis melo HOM05D001963 ORTHO05D001863 8.6e-10 66.6 37 73.0
Atru.chr6.2082 Acer truncatum HOM05D000107 ORTHO05D000062 1.5e-09 65.9 68 39.7
Oeu027214.1 Olea europaea HOM05D000107 ORTHO05D003213 1.9e-09 65.5 68 41.2
QL01p002857 Quercus lobata HOM05D000240 ORTHO05D003213 3.3e-09 64.7 69 42.0
QL04p081146 Quercus lobata HOM05D000107 ORTHO05D003213 3.3e-09 64.7 69 42.0
CANSAT80G1283 Cannabis sativa HOM05D013174 ORTHO05D015289 7.3e-09 63.5 69 40.6
QL10p007182 Quercus lobata HOM05D000107 ORTHO05D000062 7.3e-09 63.5 69 40.6
Aqoxy1G03105 Aquilegia oxysepala HOM05D000107 ORTHO05D003213 9.5e-09 63.2 69 44.9
TWI23G1198 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.6e-08 62.4 69 42.0
CSS0014387 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.1e-08 62.0 68 42.6
Aqoxy4G01393 Aquilegia oxysepala HOM05D011461 ORTHO05D003213 3.6e-08 61.2 66 45.5
Rhsim05G0124400 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.6e-08 61.2 69 40.6
CANSAT54G1543 Cannabis sativa HOM05D000107 ORTHO05D000062 4.7e-08 60.8 61 34.4
CANSAT71G0016 Cannabis sativa HOM05D000107 ORTHO05D000062 4.7e-08 60.8 61 34.4
Hma1.2p1_0555F.1_g178040 Hydrangea macrophylla HOM05D000107 ORTHO05D003213 4.7e-08 60.8 60 40.0
Rhsim11G0023200 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.7e-08 60.8 69 39.1
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.7e-08 60.8 68 39.7
CANSAT01G1055 Cannabis sativa HOM05D000107 ORTHO05D000062 6.2e-08 60.5 61 36.1
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.2e-08 60.5 71 39.4
Rhsim07G0185300 Rhododendron simsii HOM05D000107 ORTHO05D003213 6.2e-08 60.5 68 39.7
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.2e-08 60.5 71 40.8
Rhsim09G0134500 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.2e-08 60.5 71 40.8
CANSAT80G0114 Cannabis sativa HOM05D000107 ORTHO05D000062 8.1e-08 60.1 69 37.7
MBI16_g22305_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D003213 8.1e-08 60.1 59 40.7
MBI15_g13723_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-07 59.7 61 37.7
Rhsim01G0164300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-07 59.7 71 39.4
Rhsim04G0033300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-07 59.7 71 39.4
Rhsim05G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-07 59.7 71 39.4
Atru.chr1.1195 Acer truncatum HOM05D000107 ORTHO05D000062 1.4e-07 59.3 69 30.4
RhsimUnG0068500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-07 59.3 68 42.6
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.8e-07 58.9 59 42.4
Rhsim09G0047500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.8e-07 58.9 59 42.4
Rhsim11G0024300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.8e-07 58.9 69 37.7
RhsimUnG0181200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.8e-07 58.9 59 42.4
CANSAT25G1518 Cannabis sativa HOM05D000107 ORTHO05D000062 2.4e-07 58.5 61 32.8
Oeu062448.1 Olea europaea HOM05D000107 ORTHO05D003213 2.4e-07 58.5 68 36.8
CANSAT78G0770 Cannabis sativa HOM05D000107 ORTHO05D000062 3.1e-07 58.2 61 32.8
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.1e-07 58.2 68 36.8
Rhsim09G0057000 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.1e-07 58.2 68 36.8
TAR049G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 3.1e-07 58.2 61 45.9
CANSAT01G2457 Cannabis sativa HOM05D000107 ORTHO05D000062 4.0e-07 57.8 59 37.3
Oeu017731.1 Olea europaea HOM05D000107 ORTHO05D003213 6.8e-07 57.0 68 35.3
Oeu017732.1 Olea europaea HOM05D000107 ORTHO05D003213 6.8e-07 57.0 68 35.3
Rhsim09G0074400 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.8e-07 57.0 69 37.7
Rhsim10G0071800 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.8e-07 57.0 68 38.2
MELO3C031426.2 Cucumis melo HOM05D046152 ORTHO05D003213 8.9e-07 56.6 64 40.6
QL04p009914 Quercus lobata HOM05D000107 ORTHO05D003213 1.2e-06 56.2 69 39.1
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-06 56.2 68 36.8
RhsimUnG0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-06 56.2 68 36.8
ATR1201G001 Amborella trichopoda HOM05D000107 ORTHO05D003213 1.5e-06 55.8 67 35.8
Aqoxy3G01844 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 1.5e-06 55.8 69 37.7
CANSAT11G1794 Cannabis sativa HOM05D000107 ORTHO05D000062 1.5e-06 55.8 67 35.8
CANSAT25G2889 Cannabis sativa HOM05D000107 ORTHO05D000062 1.5e-06 55.8 59 37.3
CANSAT56G2720 Cannabis sativa HOM05D000107 ORTHO05D000062 1.5e-06 55.8 68 33.8
CANSAT78G0768 Cannabis sativa HOM05D000107 ORTHO05D000062 1.5e-06 55.8 59 37.3
Oeu004802.1 Olea europaea HOM05D000107 ORTHO05D003213 1.5e-06 55.8 68 36.8
MBI18_g19501_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.0e-06 55.5 66 34.8
Nitab4.5_0006332g0050 Nicotiana tabacum HOM05D003120 ORTHO05D003568 2.0e-06 55.5 60 41.7
Oeu005851.1 Olea europaea HOM05D000107 ORTHO05D003213 2.0e-06 55.5 68 36.8
TPR.G34585 Trifolium pratense HOM05D000107 ORTHO05D000062 2.0e-06 55.5 67 38.8
CANSAT01G1328 Cannabis sativa HOM05D000107 ORTHO05D000062 2.6e-06 55.1 59 42.4
CANSAT11G0105 Cannabis sativa HOM05D000107 ORTHO05D000062 2.6e-06 55.1 67 34.3
CANSAT56G1730 Cannabis sativa HOM05D000107 ORTHO05D003213 2.6e-06 55.1 59 42.4
CANSAT78G2046 Cannabis sativa HOM05D000107 ORTHO05D000062 2.6e-06 55.1 59 42.4
CANSAT78G2365 Cannabis sativa HOM05D009677 ORTHO05D011883 2.6e-06 55.1 59 37.3
CANSAT11G1494 Cannabis sativa HOM05D000107 ORTHO05D000062 3.4e-06 54.7 59 35.6
ECA232G2995 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.4e-06 54.3 59 37.3
Gorai.010G175300 Gossypium raimondii HOM05D000107 ORTHO05D000062 4.4e-06 54.3 61 39.3
Lj8C456G3 Lonicera japonica HOM05D000107 ORTHO05D000062 4.4e-06 54.3 61 37.7
Oeu017730.1 Olea europaea HOM05D000107 ORTHO05D003213 4.4e-06 54.3 61 36.1
PSO017G5467 Papaver somniferum HOM05D000107 ORTHO05D000062 5.8e-06 53.9 69 34.8
CANSAT11G1326 Cannabis sativa HOM05D000107 ORTHO05D000062 7.6e-06 53.5 58 43.1
CANSAT25G3769 Cannabis sativa HOM05D000107 ORTHO05D000062 7.6e-06 53.5 67 34.3
CANSAT64G0245 Cannabis sativa HOM05D000107 ORTHO05D000062 7.6e-06 53.5 59 40.7
Nitab4.5_0009388g0030 Nicotiana tabacum HOM05D011106 ORTHO05D010952 7.6e-06 53.5 60 40.0
Ciclev10010251m.g Citrus clementina HOM05D000107 ORTHO05D003213 9.9e-06 53.1 69 36.2
PSO198G0028 Papaver somniferum HOM05D000107 ORTHO05D000062 9.9e-06 53.1 75 40.0
PSO210G1515 Papaver somniferum HOM05D000107 ORTHO05D000062 9.9e-06 53.1 69 34.8


User provided reference genes

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