Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029360.2 Cucumis melo HOM05D000017 ORTHO05D000013 3.3e-32 141.0 65 100.0
MELO3C029995.2 Cucumis melo HOM05D000017 ORTHO05D000013 4.6e-26 120.6 65 86.2
MELO3C031247.2 Cucumis melo HOM05D000017 ORTHO05D000013 1.3e-25 119.0 65 83.1
MELO3C030343.2 Cucumis melo HOM05D000017 ORTHO05D000013 1.9e-24 115.2 65 83.1
MELO3C031712.2 Cucumis melo HOM05D000017 ORTHO05D000013 4.3e-24 114.0 65 84.6
MELO3C032492.2 Cucumis melo HOM05D000017 ORTHO05D000013 5.6e-24 113.6 71 80.3
MELO3C031777.2 Cucumis melo HOM05D000017 ORTHO05D000013 1.6e-23 112.1 65 81.5
MELO3C029824.2 Cucumis melo HOM05D000017 ORTHO05D000013 2.8e-23 111.3 64 82.8
MELO3C028883.2 Cucumis melo HOM05D000017 ORTHO05D000013 3.7e-23 110.9 71 77.5
MELO3C034196.2 Cucumis melo HOM05D000017 ORTHO05D000013 6.2e-23 110.2 70 78.6
MELO3C027481.2 Cucumis melo HOM05D000017 ORTHO05D000013 1.1e-22 109.4 63 82.5
MELO3C028598.2 Cucumis melo HOM05D000017 ORTHO05D000013 1.8e-22 108.6 71 74.6
MELO3C034754.2 Cucumis melo HOM05D000017 ORTHO05D000013 4.5e-21 104.0 69 75.4
MELO3C027574.2 Cucumis melo HOM05D000017 ORTHO05D000013 2.9e-20 101.3 59 79.7
MELO3C029989.2 Cucumis melo HOM05D000017 ORTHO05D000013 3.8e-20 100.9 65 73.8
MELO3C033006.2 Cucumis melo HOM05D000017 ORTHO05D000013 9.3e-19 96.3 51 86.3
MELO3C034235.2 Cucumis melo HOM05D000017 ORTHO05D000013 3.5e-18 94.4 59 78.0
MELO3C029426.2 Cucumis melo HOM05D000017 ORTHO05D000013 6.0e-18 93.6 59 78.0
MELO3C027770.2 Cucumis melo HOM05D000017 ORTHO05D000013 1.0e-17 92.8 59 78.0
MELO3C033095.2 Cucumis melo HOM05D000017 ORTHO05D000013 3.9e-17 90.9 71 67.6
MELO3C033069.2 Cucumis melo HOM05D000017 ORTHO05D000013 4.8e-15 84.0 55 74.5
CANSAT01G2148 Cannabis sativa HOM05D000017 ORTHO05D000013 8.4e-12 73.2 60 55.0
MELO3C033035.2 Cucumis melo HOM05D000017 ORTHO05D000013 1.9e-11 72.0 36 83.3
MELO3C033762.2 Cucumis melo HOM05D000017 ORTHO05D000013 3.2e-11 71.2 36 83.3
MELO3C029916.2 Cucumis melo HOM05D000017 ORTHO05D000013 5.5e-11 70.5 36 83.3
MELO3C034634.2 Cucumis melo HOM05D000017 ORTHO05D000013 2.7e-10 68.2 36 86.1
MELO3C033202.2 Cucumis melo HOM05D000017 ORTHO05D000013 4.6e-10 67.4 36 83.3
Oeu012528.1 Olea europaea HOM05D000017 ORTHO05D000013 6.1e-10 67.0 69 43.5
MELO3C034142.2 Cucumis melo HOM05D000017 ORTHO05D000013 7.9e-10 66.6 36 80.6
CANSAT01G1220 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-09 66.2 67 47.8
CANSAT11G0851 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-09 66.2 67 47.8
CANSAT11G1223 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-09 66.2 67 47.8
CANSAT35G0491 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-09 66.2 67 47.8
CANSAT64G1570 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-09 66.2 67 47.8
CANSAT78G0725 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-09 66.2 57 49.1
CANSAT80G0351 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-09 66.2 67 47.8
CANSAT01G0081 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-09 65.9 67 47.8
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 1.3e-09 65.9 70 40.0
ATR0727G001 Amborella trichopoda HOM05D000017 ORTHO05D000013 2.3e-09 65.1 61 50.8
MELO3C028837.2 Cucumis melo HOM05D000017 ORTHO05D000013 2.3e-09 65.1 55 61.8
Oeu041330.1 Olea europaea HOM05D000017 ORTHO05D000013 2.3e-09 65.1 70 40.0
Oeu043718.1 Olea europaea HOM05D000017 ORTHO05D000013 2.3e-09 65.1 70 41.4
CANSAT01G2730 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-09 64.7 67 46.3
CANSAT35G1021 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-09 64.7 67 46.3
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-09 64.7 61 47.5
CANSAT64G3012 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-09 64.7 61 47.5
Oeu055528.1 Olea europaea HOM05D000017 ORTHO05D000013 3.0e-09 64.7 69 42.0
Oeu023181.1 Olea europaea HOM05D000017 ORTHO05D000013 3.9e-09 64.3 70 40.0
Oeu053659.1 Olea europaea HOM05D000017 ORTHO05D000013 3.9e-09 64.3 70 40.0
CANSAT21G1712 Cannabis sativa HOM05D000017 ORTHO05D000013 5.1e-09 63.9 67 44.8
CANSAT25G1081 Cannabis sativa HOM05D000017 ORTHO05D000013 5.1e-09 63.9 67 46.3
CANSAT54G0083 Cannabis sativa HOM05D010396 ORTHO05D000013 5.1e-09 63.9 67 46.3
CANSAT56G2625 Cannabis sativa HOM05D000017 ORTHO05D000013 5.1e-09 63.9 67 46.3
MELO3C030454.2 Cucumis melo HOM05D000017 ORTHO05D000013 5.1e-09 63.9 36 77.8
Oeu000015.1 Olea europaea HOM05D000017 ORTHO05D000013 5.1e-09 63.9 69 42.0
Oeu041855.1 Olea europaea HOM05D000017 ORTHO05D000013 8.7e-09 63.2 69 43.5
Oeu005233.1 Olea europaea HOM05D000017 ORTHO05D000013 1.1e-08 62.8 69 43.5
Oeu009473.1 Olea europaea HOM05D000017 ORTHO05D000013 1.1e-08 62.8 70 38.6
Nn5g27099 Nelumbo nucifera HOM05D000017 ORTHO05D000013 2.5e-08 61.6 67 43.3
CANSAT21G2295 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-08 61.2 61 44.3
CANSAT54G1361 Cannabis sativa HOM05D000017 ORTHO05D000013 4.3e-08 60.8 70 41.4
Oeu001753.1 Olea europaea HOM05D000017 ORTHO05D000013 4.3e-08 60.8 69 40.6
Oeu027638.1 Olea europaea HOM05D000017 ORTHO05D000013 4.3e-08 60.8 69 42.0
Oeu037740.1 Olea europaea HOM05D000017 ORTHO05D000013 4.3e-08 60.8 69 42.0
CANSAT54G0192 Cannabis sativa HOM05D000017 ORTHO05D000013 5.7e-08 60.5 61 45.9
CANSAT64G1909 Cannabis sativa HOM05D000017 ORTHO05D000013 5.7e-08 60.5 61 44.3
CANSAT80G0876 Cannabis sativa HOM05D000017 ORTHO05D000013 7.4e-08 60.1 66 45.5
MELO3C031861.2 Cucumis melo HOM05D000017 ORTHO05D000013 9.7e-08 59.7 71 50.7
FvH4_5g03091 Fragaria vesca HOM05D000017 ORTHO05D000013 1.3e-07 59.3 58 44.8
FAN08G0283 Fragaria x ananassa HOM05D000017 ORTHO05D000013 1.3e-07 59.3 58 44.8
Oeu034871.1 Olea europaea HOM05D000017 ORTHO05D000013 1.3e-07 59.3 67 43.3
CANSAT35G1006 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-07 58.9 67 43.3
Oeu063036.1 Olea europaea HOM05D000017 ORTHO05D000013 1.6e-07 58.9 70 37.1
CANSAT80G2780 Cannabis sativa HOM05D000017 ORTHO05D000013 2.2e-07 58.5 60 46.7
RcHm_v2.0_Chr3g0453251 Rosa chinensis HOM05D000017 ORTHO05D000013 2.2e-07 58.5 68 39.7
RcHm_v2.0_Chr5g0042901 Rosa chinensis HOM05D000017 ORTHO05D000013 2.2e-07 58.5 68 39.7
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 2.2e-07 58.5 70 34.3
CANSAT35G0089 Cannabis sativa HOM05D000017 ORTHO05D000013 2.8e-07 58.2 70 41.4
CANSAT54G1096 Cannabis sativa HOM05D000017 ORTHO05D000013 2.8e-07 58.2 70 35.7
CANSAT56G0213 Cannabis sativa HOM05D000017 ORTHO05D000013 2.8e-07 58.2 70 35.7
CAN.G114.4 Capsicum annuum HOM05D006372 ORTHO05D007484 2.8e-07 58.2 70 42.9
CANSAT54G2057 Cannabis sativa HOM05D000017 ORTHO05D000013 3.7e-07 57.8 74 40.5
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 3.7e-07 57.8 70 34.3
CANSAT66G0002 Cannabis sativa HOM05D000017 ORTHO05D000013 4.8e-07 57.4 61 42.6
CANSAT80G1918 Cannabis sativa HOM05D000017 ORTHO05D000013 6.3e-07 57.0 70 40.0
FvH4_1g29590 Fragaria vesca HOM05D000017 ORTHO05D025506 6.3e-07 57.0 66 37.9
FvH4_4g07822 Fragaria vesca HOM05D000017 ORTHO05D000013 6.3e-07 57.0 58 43.1
FvH4_5g24391 Fragaria vesca HOM05D000017 ORTHO05D000013 6.3e-07 57.0 66 37.9
Nitab4.5_0010494g0010 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.3e-07 57.0 69 39.1
CANSAT11G1736 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-07 56.6 70 34.3
MELO3C033090.2 Cucumis melo HOM05D000017 ORTHO05D000013 8.2e-07 56.6 30 90.0
Sopen09g021110 Solanum pennellii HOM05D000017 ORTHO05D000013 8.2e-07 56.6 70 35.7
CANSAT35G1386 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-06 56.2 34 64.7
CANSAT01G2928 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-06 55.8 60 45.0
CANSAT11G1657 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-06 55.8 60 45.0
CANSAT21G1475 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-06 55.8 60 45.0
CANSAT54G1422 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-06 55.8 60 45.0
CANSAT54G1694 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-06 55.8 60 45.0
MELO3C031467.2 Cucumis melo HOM05D000017 ORTHO05D000013 1.4e-06 55.8 37 59.5
CANSAT78G2345 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-06 55.5 70 40.0
CANSAT80G0333 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-06 55.5 70 40.0
Nitab4.5_0000027g0260 Nicotiana tabacum HOM05D009153 ORTHO05D000013 1.8e-06 55.5 70 37.1
CANSAT01G2588 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-06 55.1 70 40.0
CANSAT01G2945 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-06 55.1 70 40.0
CANSAT25G0681 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-06 55.1 70 40.0
MD15G1409800 Malus domestica HOM05D000017 ORTHO05D000013 2.4e-06 55.1 68 39.7
Sopen10g005650 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-06 55.1 70 38.6
CANSAT78G0171 Cannabis sativa HOM05D000017 ORTHO05D000013 3.1e-06 54.7 68 38.2
FvH4_6g20107 Fragaria vesca HOM05D000017 ORTHO05D000013 3.1e-06 54.7 66 36.4
Hma1.2p1_0459F.1_g157350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.1e-06 54.7 68 38.2
MD10G1135700 Malus domestica HOM05D000017 ORTHO05D000013 3.1e-06 54.7 68 39.7
CSS0039556 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.1e-06 54.3 61 44.3
CANSAT21G1471 Cannabis sativa HOM05D000017 ORTHO05D000013 4.1e-06 54.3 60 43.3
CANSAT78G1392 Cannabis sativa HOM05D000017 ORTHO05D000013 4.1e-06 54.3 70 38.6
C05p35180 Brassica napus HOM05D000017 ORTHO05D000013 5.3e-06 53.9 61 42.6
CSS0010430 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 5.3e-06 53.9 61 44.3
CSS0019911 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 5.3e-06 53.9 61 42.6
Hma1.2p1_0110F.1_g052740 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.3e-06 53.9 68 38.2
Hma1.2p1_0691F.1_g204220 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.3e-06 53.9 68 38.2
CANSAT01G2166 Cannabis sativa HOM05D000017 ORTHO05D000013 6.9e-06 53.5 60 43.3
CANSAT21G0541 Cannabis sativa HOM05D000017 ORTHO05D000013 6.9e-06 53.5 60 43.3
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 6.9e-06 53.5 60 43.3
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 6.9e-06 53.5 60 43.3
CANSAT35G2016 Cannabis sativa HOM05D000017 ORTHO05D000013 6.9e-06 53.5 60 43.3
CANSAT78G1514 Cannabis sativa HOM05D000017 ORTHO05D000013 6.9e-06 53.5 60 43.3
CANSAT01G0841 Cannabis sativa HOM05D000017 ORTHO05D000013 9.0e-06 53.1 35 57.1
CANSAT78G0791 Cannabis sativa HOM05D000017 ORTHO05D000013 9.0e-06 53.1 61 41.0
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 9.0e-06 53.1 61 42.6
Hma1.2p1_0021F.1_g014373 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.0e-06 53.1 68 38.2
Hma1.2p1_0823F.1_g224530 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.0e-06 53.1 68 38.2
Hma1.2p1_1029F.1_g249730 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.0e-06 53.1 68 38.2
Lj7C243T2 Lonicera japonica HOM05D000017 ORTHO05D000013 9.0e-06 53.1 68 39.7
Nitab4.5_0001464g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000013 9.0e-06 53.1 70 34.3


User provided reference genes

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