Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029307.2 Cucumis melo HOM05D008282 ORTHO05D009173 1.5e-67 259.2 119 100.0
COL.COLO4_29927 Corchorus olitorius HOM05D008282 ORTHO05D009173 1.4e-20 103.2 54 74.1
CSS0031071 Camellia sinensis var. sinensis HOM05D008282 ORTHO05D009173 2.6e-19 99.0 61 68.9
FvH4_1g19000 Fragaria vesca HOM05D008282 ORTHO05D009173 1.7e-18 96.3 60 66.7
Duzib138G1943 Durio zibethinus HOM05D008282 ORTHO05D009173 2.9e-18 95.5 54 70.4
Carub.0007s2804 Capsella rubella HOM05D008282 ORTHO05D009173 5.0e-18 94.7 54 64.8
Duzib138G1397 Durio zibethinus HOM05D008282 ORTHO05D009173 1.9e-17 92.8 54 66.7
Actinidia29960 Actinidia chinensis HOM05D008282 ORTHO05D009173 3.2e-17 92.0 55 63.6
Thecc.01G205100 Theobroma cacao HOM05D008282 ORTHO05D009173 3.2e-17 92.0 58 63.8
Duzib138G0497 Durio zibethinus HOM05D008282 ORTHO05D009173 4.2e-17 91.7 55 67.3
Thecc.01G234600 Theobroma cacao HOM05D008282 ORTHO05D009173 5.5e-17 91.3 54 68.5
CsaV3_1G039470 Cucumis sativus L. HOM05D008282 ORTHO05D009173 2.1e-16 89.4 63 63.5
ClCG03G016530 Citrullus lanatus HOM05D008282 ORTHO05D009173 3.6e-16 88.6 63 66.7
THA.LOC104804768 Tarenaya hassleriana HOM05D008282 ORTHO05D009173 3.6e-16 88.6 66 56.1
Carub.0007s2805 Capsella rubella HOM05D008282 ORTHO05D009173 1.8e-15 86.3 74 48.6
Aa31LG9G3100 Aethionema arabicum HOM05D008282 ORTHO05D009173 2.3e-15 85.9 61 59.0
Gohir.D02G064075 Gossypium hirsutum HOM05D008282 ORTHO05D009173 3.0e-15 85.5 59 55.9
CsaV3_1G039450 Cucumis sativus L. HOM05D008282 ORTHO05D009173 6.7e-15 84.3 63 63.5
Gohir.A02G058203 Gossypium hirsutum HOM05D008282 ORTHO05D009173 1.1e-14 83.6 60 53.3
THA.LOC104816929 Tarenaya hassleriana HOM05D008282 ORTHO05D009173 1.1e-14 83.6 65 52.3
Gorai.005G072200 Gossypium raimondii HOM05D008282 ORTHO05D009173 2.0e-14 82.8 60 53.3
Gorai.005G072300 Gossypium raimondii HOM05D008282 ORTHO05D009173 2.0e-14 82.8 60 53.3
Gohir.D02G064025 Gossypium hirsutum HOM05D008282 ORTHO05D009173 2.5e-14 82.4 60 53.3
Gohir.D02G064050 Gossypium hirsutum HOM05D008282 ORTHO05D009173 2.5e-14 82.4 60 53.3
Gorai.005G072400 Gossypium raimondii HOM05D008282 ORTHO05D009173 2.5e-14 82.4 59 52.5
Thhalv10026987m.g Eutrema salsugineum HOM05D008282 ORTHO05D009173 3.3e-14 82.0 54 61.1
CARHR220430 Cardamine hirsuta HOM05D008282 ORTHO05D009173 4.3e-14 81.6 58 53.4
AT4G14276 Arabidopsis thaliana HOM05D008282 ORTHO05D009173 5.7e-14 81.3 54 59.3
FAN19G2952 Fragaria x ananassa HOM05D008282 ORTHO05D009173 5.7e-14 81.3 57 59.6
Carub.0007s2806 Capsella rubella HOM05D008282 ORTHO05D009173 7.4e-14 80.9 53 64.2
AT5G52605 Arabidopsis thaliana HOM05D008282 ORTHO05D009173 9.7e-14 80.5 54 57.4
Prupe.6G206400 Prunus persica HOM05D008282 ORTHO05D009173 2.8e-13 79.0 54 63.0
Gohir.A02G058202 Gossypium hirsutum HOM05D008282 ORTHO05D009173 3.7e-13 78.6 60 51.7
Potri.016G130300 Populus trichocarpa HOM05D008282 ORTHO05D009173 3.7e-13 78.6 63 55.6
Gorai.005G072100 Gossypium raimondii HOM05D008282 ORTHO05D009173 4.8e-13 78.2 60 51.7
Prupe.6G209700 Prunus persica HOM05D008282 ORTHO05D009173 4.8e-13 78.2 54 61.1
Prupe.6G209800 Prunus persica HOM05D008282 ORTHO05D009173 4.8e-13 78.2 54 61.1
Oeu020583.1 Olea europaea HOM05D008282 ORTHO05D009173 1.4e-12 76.6 56 60.7
Prupe.6G206000 Prunus persica HOM05D008282 ORTHO05D009173 2.4e-12 75.9 53 60.4
Potri.013G113600 Populus trichocarpa HOM05D008282 ORTHO05D009173 3.1e-12 75.5 60 55.0
Prupe.6G205300 Prunus persica HOM05D008282 ORTHO05D009173 6.9e-12 74.3 54 59.3
Potri.013G113550 Populus trichocarpa HOM05D008282 ORTHO05D009173 1.2e-11 73.6 60 53.3
CsaV3_1G039460 Cucumis sativus L. HOM05D008282 ORTHO05D009173 2.0e-11 72.8 108 40.7
Nitab4.5_0002770g0030 Nicotiana tabacum HOM05D008282 ORTHO05D009173 1.1e-09 67.0 47 57.4
Solyc07g008377.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 1.1e-09 67.0 65 43.1
CARHR216630 Cardamine hirsuta HOM05D008282 ORTHO05D009173 1.4e-09 66.6 49 49.0
MD15G1119700 Malus domestica HOM05D008282 ORTHO05D009173 1.4e-09 66.6 76 48.7
Solyc07g008375.1 Solanum lycopersicum HOM05D008282 ORTHO05D009173 1.9e-09 66.2 65 43.1
BraA02t04950Z Brassica rapa HOM05D008408 ORTHO05D009173 7.2e-09 64.3 57 52.6
Gorai.005G072000 Gossypium raimondii HOM05D008282 ORTHO05D009173 1.4e-07 60.1 52 48.1
Gohir.A02G058204 Gossypium hirsutum HOM05D008282 ORTHO05D009173 2.3e-07 59.3 59 42.4
FvH4_4g06730 Fragaria vesca HOM05D008282 ORTHO05D009173 6.7e-07 57.8 63 46.0
Carub.0006s1765 Capsella rubella HOM05D008408 ORTHO05D009173 2.6e-06 55.8 59 47.5
BNapus_Darmor_BZH_scaffold_38p02640 Brassica napus HOM05D008408 ORTHO05D009173 3.3e-06 55.5 57 43.9
AT4G18823 Arabidopsis thaliana HOM05D008408 ORTHO05D009173 7.4e-06 54.3 55 43.6


User provided reference genes

Program Settings