Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029040.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.7e-119 430.6 210 100.0
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.7e-35 152.9 88 80.7
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.7e-35 152.9 86 82.6
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.5e-35 152.5 86 81.4
MELO3C028434.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.8e-34 150.2 88 81.8
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.3e-32 144.1 76 78.9
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.6e-32 143.7 74 81.1
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.8e-32 142.9 94 74.5
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.7e-32 142.5 95 75.8
MELO3C029981.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.4e-31 140.6 95 74.7
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 5.3e-31 138.7 75 78.7
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 4.2e-28 129.0 62 85.5
MELO3C030144.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.7e-26 121.3 102 52.0
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.3e-25 119.0 75 64.0
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.3e-24 117.5 86 69.8
MELO3C032718.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.4e-23 113.2 96 52.1
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 2.4e-23 113.2 74 60.8
MELO3C031375.2 Cucumis melo HOM05D008781 ORTHO05D003768 6.9e-23 111.7 154 42.2
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 9.0e-23 111.3 71 64.8
MELO3C035072.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.6e-22 109.8 51 90.2
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 5.9e-22 108.6 69 65.2
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 1.3e-21 107.5 71 63.4
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 2.9e-21 106.3 70 62.9
RcHm_v2.0_Chr3g0492801 Rosa chinensis HOM05D007314 ORTHO05D003768 3.8e-21 105.9 70 62.9
MELO3C032996.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.5e-21 105.1 65 67.7
MELO3C029411.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.5e-21 104.8 64 67.2
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-20 104.4 62 69.4
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.2e-20 102.4 69 60.9
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 5.5e-20 102.1 65 60.0
RcHm_v2.0_Chr5g0059371 Rosa chinensis HOM05D007314 ORTHO05D003768 1.6e-19 100.5 71 60.6
CsaV3_4G009050 Cucumis sativus L. HOM05D007314 ORTHO05D003768 2.7e-19 99.8 74 54.1
CANSAT35G0660 Cannabis sativa HOM05D007314 ORTHO05D003768 6.1e-19 98.6 97 48.5
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.4e-18 97.4 62 61.3
RcHm_v2.0_Chr7g0200591 Rosa chinensis HOM05D007314 ORTHO05D003768 6.7e-18 95.1 76 47.4
MELO3C035437.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.0e-17 93.6 59 62.7
FvH4_4g01311 Fragaria vesca HOM05D007314 ORTHO05D003768 2.8e-16 89.7 76 47.4
FvH4_4g12371 Fragaria vesca HOM05D007314 ORTHO05D003768 2.8e-16 89.7 75 48.0
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 3.7e-16 89.4 66 53.0
MELO3C030233.2 Cucumis melo HOM05D000030 ORTHO05D000031 8.2e-16 88.2 50 80.0
FvH4_6g21082 Fragaria vesca HOM05D007314 ORTHO05D003768 1.8e-15 87.0 68 51.5
CANSAT25G1818 Cannabis sativa HOM05D007314 ORTHO05D003768 5.3e-15 85.5 75 54.7
MELO3C000505.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.5e-14 84.0 40 92.5
MELO3C034792.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.9e-14 82.0 57 63.2
MELO3C029576.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.4e-12 74.7 49 73.5
MELO3C033672.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.7e-11 73.2 41 68.3
MELO3C029734.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.6e-11 72.8 38 73.7
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 4.7e-11 72.4 80 46.2
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 6.1e-11 72.0 66 40.9
MELO3C030096.2 Cucumis melo HOM05D008781 ORTHO05D169262 6.1e-11 72.0 86 44.2
MELO3C032661.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.1e-11 72.0 42 64.3
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 7.9e-11 71.6 80 45.0
MELO3C028630.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.9e-11 71.6 44 70.5
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.8e-10 70.5 79 45.6
RcHm_v2.0_Chr7g0177401 Rosa chinensis HOM05D007314 ORTHO05D003768 1.8e-10 70.5 53 52.8
MELO3C000282.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.9e-10 69.3 35 85.7
MELO3C029566.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.9e-10 69.3 33 87.9
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 1.1e-09 67.8 75 41.3
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 2.6e-09 66.6 73 38.4
Aqoxy3G00743 Aquilegia oxysepala HOM05D053128 ORTHO05D003768 3.3e-09 66.2 67 43.3
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 5.7e-09 65.5 67 46.3
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 5.7e-09 65.5 67 46.3
MELO3C029568.2 Cucumis melo HOM05D008781 ORTHO05D011271 5.7e-09 65.5 48 60.4
MELO3C032453.2 Cucumis melo HOM05D007314 ORTHO05D034924 5.7e-09 65.5 43 58.1
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 5.7e-09 65.5 75 38.7
PSO675G1909 Papaver somniferum HOM05D008526 ORTHO05D010380 5.7e-09 65.5 74 36.5
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 7.4e-09 65.1 64 46.9
Aqoxy3G03529 Aquilegia oxysepala HOM05D007314 ORTHO05D003768 9.7e-09 64.7 76 38.2
BolC2t08290H Brassica oleracea HOM05D007314 ORTHO05D003768 9.7e-09 64.7 73 43.8
Aqoxy5G02986 Aquilegia oxysepala HOM05D007314 ORTHO05D000285 1.7e-08 63.9 76 38.2
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 1.7e-08 63.9 68 47.1
Atru.chr2.2530 Acer truncatum HOM05D001899 ORTHO05D001858 2.2e-08 63.5 73 38.4
BolC3t20566H Brassica oleracea HOM05D007314 ORTHO05D003768 2.2e-08 63.5 67 37.3
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 2.2e-08 63.5 75 40.0
MELO3C033635.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.8e-08 63.2 35 71.4
RcHm_v2.0_Chr5g0060161 Rosa chinensis HOM05D009091 ORTHO05D003768 2.8e-08 63.2 69 46.4
Aqoxy3G00744 Aquilegia oxysepala HOM05D053128 ORTHO05D003768 3.7e-08 62.8 67 41.8
MELO3C032063.2 Cucumis melo HOM05D013245 ORTHO05D000592 4.8e-08 62.4 33 81.8
MELO3C033118.2 Cucumis melo HOM05D000539 ORTHO05D000592 4.8e-08 62.4 37 62.2
PSO210G2358 Papaver somniferum HOM05D008526 ORTHO05D010380 4.8e-08 62.4 74 36.5
MELO3C029090.2 Cucumis melo HOM05D008781 ORTHO05D000592 6.3e-08 62.0 42 66.7
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 6.3e-08 62.0 69 46.4
FvH4_3g21852 Fragaria vesca HOM05D008321 ORTHO05D003768 8.2e-08 61.6 67 41.8
FvH4_5g23172 Fragaria vesca HOM05D008321 ORTHO05D003768 8.2e-08 61.6 66 42.4
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 8.2e-08 61.6 67 40.3
MELO3C030946.2 Cucumis melo HOM05D008781 ORTHO05D025214 1.4e-07 60.8 33 78.8
MELO3C034479.2 Cucumis melo HOM05D008781 ORTHO05D025214 1.4e-07 60.8 41 68.3
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 1.4e-07 60.8 67 41.8
FvH4_3g32731 Fragaria vesca HOM05D008321 ORTHO05D003768 3.1e-07 59.7 67 41.8
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.1e-07 59.7 67 38.8
PSO801G0005 Papaver somniferum HOM05D008526 ORTHO05D010380 3.1e-07 59.7 72 36.1
MELO3C030193.2 Cucumis melo HOM05D008781 ORTHO05D025214 4.1e-07 59.3 50 56.0
MELO3C028758.2 Cucumis melo HOM05D008781 ORTHO05D011271 5.3e-07 58.9 33 75.8
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 5.3e-07 58.9 67 38.8
RcHm_v2.0_Chr1g0326261 Rosa chinensis HOM05D009091 ORTHO05D003768 5.3e-07 58.9 62 46.8
MELO3C029064.2 Cucumis melo HOM05D008781 ORTHO05D011271 7.0e-07 58.5 33 78.8
PSO675G7499 Papaver somniferum HOM05D008526 ORTHO05D010380 7.0e-07 58.5 73 34.2
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 9.1e-07 58.2 67 37.3
MELO3C028787.2 Cucumis melo HOM05D008781 ORTHO05D011271 1.5e-06 57.4 29 82.8
MELO3C034381.2 Cucumis melo HOM05D008781 ORTHO05D167139 1.5e-06 57.4 42 64.3
MELO3C033839.2 Cucumis melo HOM05D008781 ORTHO05D025214 2.0e-06 57.0 29 82.8
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.0e-06 57.0 73 35.6
Ciclev10002181m.g Citrus clementina HOM05D000539 ORTHO05D000592 3.5e-06 56.2 77 40.3
MELO3C033387.2 Cucumis melo HOM05D008781 ORTHO05D169003 3.5e-06 56.2 31 77.4
MELO3C033741.2 Cucumis melo HOM05D008781 ORTHO05D011271 3.5e-06 56.2 29 82.8
CSS0009587 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 4.5e-06 55.8 86 40.7
CSS0011469 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 4.5e-06 55.8 86 40.7
FAN21G1044 Fragaria x ananassa HOM05D008321 ORTHO05D003768 5.9e-06 55.5 67 37.3


User provided reference genes

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