Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029001.2 Cucumis melo HOM05D000290 ORTHO05D009072 1.6e-197 692.6 364 100.0
CsaV3_7G021770 Cucumis sativus L. HOM05D000290 ORTHO05D009072 2.6e-70 270.0 193 81.3
MELO3C013172.2 Cucumis melo HOM05D000290 ORTHO05D009072 7.2e-60 235.3 176 79.0
ClCG09G010770 Citrullus lanatus HOM05D000290 ORTHO05D009072 8.0e-59 231.9 193 71.5
RcHm_v2.0_Chr6g0273371 Rosa chinensis HOM05D000290 ORTHO05D009072 2.2e-40 170.6 197 50.8
GSVIVG01013666001 Vitis vinifera HOM05D000290 ORTHO05D009072 2.2e-40 170.6 193 50.3
CiPaw.15G010400 Carya illinoinensis HOM05D000290 ORTHO05D009072 2.4e-39 167.2 193 53.9
FvH4_2g12660 Fragaria vesca HOM05D000290 ORTHO05D009072 5.4e-39 166.0 194 51.0
FAN24G2214 Fragaria x ananassa HOM05D000290 ORTHO05D009072 9.1e-39 165.2 194 50.5
Prupe.8G046100 Prunus persica HOM05D000290 ORTHO05D009072 1.6e-38 164.5 194 51.0
Thecc.08G196900 Theobroma cacao HOM05D000290 ORTHO05D009072 2.0e-38 164.1 193 49.2
MD10G1042100 Malus domestica HOM05D000290 ORTHO05D009072 3.5e-38 163.3 194 52.6
Manes.18G096700 Manihot esculenta HOM05D000290 ORTHO05D009072 3.5e-38 163.3 194 49.5
Duzib116G0362 Durio zibethinus HOM05D000290 ORTHO05D009072 5.9e-38 162.5 194 49.5
FAN27G3199 Fragaria x ananassa HOM05D000290 ORTHO05D009072 1.0e-37 161.8 193 50.8
CANSAT25G0877 Cannabis sativa HOM05D000290 ORTHO05D009072 1.7e-37 161.0 193 53.9
Lj7A387G71 Lonicera japonica HOM05D000290 ORTHO05D009072 6.6e-37 159.1 193 48.2
Gorai.010G130800 Gossypium raimondii HOM05D000290 ORTHO05D009072 2.5e-36 157.1 194 49.5
MBI05_g00331_MAGBIO Magnolia biondii HOM05D000290 ORTHO05D009072 4.2e-36 156.4 204 46.6
Gohir.D06G114500 Gossypium hirsutum HOM05D000290 ORTHO05D009072 5.5e-36 156.0 194 49.5
Potri.002G061000 Populus trichocarpa HOM05D000290 ORTHO05D009072 5.5e-36 156.0 201 49.3
Atru.chr13.1952 Acer truncatum HOM05D000290 ORTHO05D009072 2.1e-35 154.1 193 48.7
CSS0023661 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D009072 3.6e-35 153.3 192 47.4
Eucgr.F02663 Eucalyptus grandis HOM05D000290 ORTHO05D009072 3.6e-35 153.3 193 45.1
Cc10_g06310 Coffea canephora HOM05D000290 ORTHO05D009072 1.8e-34 151.0 193 47.7
Haze_17850 Corylus avellana HOM05D000290 ORTHO05D009072 1.8e-34 151.0 196 49.0
Lalb_Chr19g0129911 Lupinus albus HOM05D000290 ORTHO05D009072 1.8e-34 151.0 193 46.6
CSS0016940 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D009072 4.0e-34 149.8 192 46.9
Ciclev10000457m.g Citrus clementina HOM05D000290 ORTHO05D009072 4.4e-33 146.4 193 47.7
Lj2g0015486 Lotus japonicus HOM05D000290 ORTHO05D009072 2.2e-32 144.1 193 45.1
Rhsim11G0089800 Rhododendron simsii HOM05D000290 ORTHO05D009072 3.7e-32 143.3 189 46.6
TPR.G16178 Trifolium pratense HOM05D000290 ORTHO05D009072 3.7e-32 143.3 193 46.6
Ca_04646_v3 Cicer arietinum L. HOM05D000290 ORTHO05D009072 3.2e-31 140.2 201 44.8
Glyma.16G158700 Glycine max HOM05D000290 ORTHO05D009072 4.1e-31 139.8 200 43.0
Phvul.004G087801 Phaseolus vulgaris HOM05D000290 ORTHO05D009072 4.1e-31 139.8 201 43.8
Zm00001eb069010 Zea mays HOM05D000290 ORTHO05D009072 4.1e-31 139.8 199 44.7
Psat0s2547g0080 Pisum sativum HOM05D000290 ORTHO05D009072 5.4e-31 139.4 193 45.6
QL02p035468 Quercus lobata HOM05D000290 ORTHO05D009072 5.4e-31 139.4 270 39.6
VMungo0464G1253 Vigna mungo HOM05D000290 ORTHO05D009072 5.4e-31 139.4 195 43.6
PGR042G2237 Punica granatum HOM05D000290 ORTHO05D009072 7.0e-31 139.0 199 46.7
Nitab4.5_0001000g0020 Nicotiana tabacum HOM05D000290 ORTHO05D009072 9.2e-31 138.7 193 45.1
Cpa.g.sc26.139 Carica papaya HOM05D000290 ORTHO05D009072 1.2e-30 138.3 193 45.6
Sabra02G0049500 Salix brachista HOM05D000290 ORTHO05D009072 1.2e-30 138.3 219 45.7
CAN.G1010.4 Capsicum annuum HOM05D000290 ORTHO05D009072 1.6e-30 137.9 193 43.0
Nn5g28903 Nelumbo nucifera HOM05D000290 ORTHO05D009072 7.8e-30 135.6 193 44.0
SGA_v2.0_scaffold21G09326 Striga asiatica HOM05D000290 ORTHO05D009072 7.8e-30 135.6 194 43.8
Lsat_1_v5_gn_6_100021 Lactuca sativa HOM05D000290 ORTHO05D009072 1.7e-29 134.4 194 42.3
TWI34G0968 Tripterygium wilfordii HOM05D000290 ORTHO05D009072 2.3e-29 134.0 193 41.5
Medtr6g038750 Medicago truncatula HOM05D000290 ORTHO05D009072 2.9e-29 133.7 193 44.6
Os04g0640500 Oryza sativa ssp. japonica HOM05D000290 ORTHO05D009072 2.9e-29 133.7 194 44.3
ECA246G3877 Erigeron canadensis HOM05D000290 ORTHO05D009072 5.0e-29 132.9 194 43.3
Solyc04g072230.4 Solanum lycopersicum HOM05D000290 ORTHO05D009072 6.6e-29 132.5 193 43.5
Sopen04g028410 Solanum pennellii HOM05D000290 ORTHO05D009072 8.6e-29 132.1 193 42.5
PSO170G1297 Papaver somniferum HOM05D000290 ORTHO05D009072 1.1e-28 131.7 194 44.3
Migut.N02931 Erythranthe guttata HOM05D000290 ORTHO05D009072 1.2e-27 128.3 192 44.3
Sc02g0003540 Simmondsia chinensis HOM05D000290 ORTHO05D009072 2.8e-27 127.1 201 41.8
HanXRQChr10g0278701 Helianthus annuus HOM05D000290 ORTHO05D009072 3.6e-27 126.7 194 40.7
Nitab4.5_0000433g0160 Nicotiana tabacum HOM05D000290 ORTHO05D009072 4.7e-27 126.3 200 41.5
Oeu036728.2 Olea europaea HOM05D000290 ORTHO05D009072 4.7e-27 126.3 209 37.8
Peaxi162Scf00226g00416 Petunia axillaris HOM05D000290 ORTHO05D009072 6.1e-27 125.9 193 40.4
Sp5g26840 Schrenkiella parvula HOM05D000290 ORTHO05D009072 8.0e-27 125.6 190 40.0
SpUn0020_0130 Schrenkiella parvula HOM05D000290 ORTHO05D009072 8.0e-27 125.6 190 40.0
Aa31LG4G8820 Aethionema arabicum HOM05D000290 ORTHO05D009072 1.4e-26 124.8 198 39.4
BraA07t31361Z Brassica rapa HOM05D000290 ORTHO05D009072 1.8e-26 124.4 197 41.1
Thhalv10018208m.g Eutrema salsugineum HOM05D000290 ORTHO05D009072 1.8e-26 124.4 180 41.1
THA.LOC104800100 Tarenaya hassleriana HOM05D000290 ORTHO05D009072 1.8e-26 124.4 194 41.2
Actinidia29564 Actinidia chinensis HOM05D000290 ORTHO05D009072 2.3e-26 124.0 108 60.2
Aqoxy5G02006 Aquilegia oxysepala HOM05D000290 ORTHO05D009072 6.8e-26 122.5 193 39.9
A07p37960 Brassica napus HOM05D000290 ORTHO05D009072 6.8e-26 122.5 197 42.1
Dinv41010 Davidia involucrata HOM05D000290 ORTHO05D009072 1.5e-25 121.3 119 54.6
C06p45880 Brassica napus HOM05D000290 ORTHO05D009072 2.6e-25 120.6 199 40.2
PSO210G7195 Papaver somniferum HOM05D000290 ORTHO05D009072 2.6e-25 120.6 194 41.2
HPP92_013076 Vanilla planifolia HOM05D000290 ORTHO05D009072 3.4e-25 120.2 193 37.3
ATR0564G056 Amborella trichopoda HOM05D000290 ORTHO05D009072 7.5e-25 119.0 200 40.0
BcaC08g46612 Brassica carinata HOM05D000290 ORTHO05D009072 9.8e-25 118.6 197 39.6
SalBow6G4636 Salvia bowleyana HOM05D000290 ORTHO05D009072 2.9e-24 117.1 197 42.1
Carub.0002s1857 Capsella rubella HOM05D000290 ORTHO05D009072 7.0e-23 112.5 197 40.1
AUR62022306 Chenopodium quinoa HOM05D000290 ORTHO05D009072 9.2e-23 112.1 192 40.6
AT1G71810 Arabidopsis thaliana HOM05D000290 ORTHO05D009072 3.5e-22 110.2 190 39.5
AL2G31380 Arabidopsis lyrata HOM05D000290 ORTHO05D009072 4.6e-22 109.8 190 38.9
COL.COLO4_24477 Corchorus olitorius HOM05D000290 ORTHO05D009072 4.6e-22 109.8 111 53.2
CDE08G1284 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 6.0e-22 109.4 213 34.7
AUR62034934 Chenopodium quinoa HOM05D000290 ORTHO05D009072 6.0e-22 109.4 192 39.6
Ah.06g191620 Amaranthus hybridus HOM05D000290 ORTHO05D009072 8.6e-21 105.5 191 39.3
DCAR_013168 Daucus carota HOM05D000290 ORTHO05D009072 8.6e-21 105.5 111 54.1
unitig_744.g24091 Utricularia gibba HOM05D000290 ORTHO05D009072 1.9e-20 104.4 193 38.3
EL10Ac1g01741 Beta vulgaris HOM05D000290 ORTHO05D009072 1.2e-19 101.7 193 37.8
arahy.Tifrunner.gnm1.ann1.V0G4QV Arachis hypogaea HOM05D000290 ORTHO05D009072 4.7e-19 99.8 103 52.4
AagrBONN_evm.TU.Sc2ySwM_117.333 Anthoceros agrestis HOM05D000290 ORTHO05D009072 2.2e-16 90.9 175 36.0
AUR62043942 Chenopodium quinoa HOM05D000290 ORTHO05D009072 1.6e-14 84.7 103 45.6
Gohir.A06G110600 Gossypium hirsutum HOM05D000290 ORTHO05D009072 1.3e-13 81.6 193 31.1
Mapoly0121s0049 Marchantia polymorpha HOM05D000290 ORTHO05D009072 1.3e-13 81.6 172 32.0
Hund17507 Selenicereus undatus HOM05D000290 ORTHO05D009072 3.9e-13 80.1 101 49.5
SEGI_24217 Sequoiadendron giganteum HOM05D000290 ORTHO05D009072 6.6e-13 79.3 192 30.2
Pp3c15_19180 Physcomitrium patens HOM05D000290 ORTHO05D009072 1.1e-07 62.0 228 25.4


User provided reference genes

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