Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C028898.2 Cucumis melo HOM05D008619 ORTHO05D000090 2.7e-45 187.6 218 100.0
CsaV3_7G027720 Cucumis sativus L. HOM05D008619 ORTHO05D000090 6.0e-29 133.3 212 87.7
CsaV3_7G027920 Cucumis sativus L. HOM05D008619 ORTHO05D000090 6.2e-26 123.2 69 84.1
CsaV3_7G027280 Cucumis sativus L. HOM05D008619 ORTHO05D000090 1.0e-20 105.9 209 82.8
ClCG09G008330 Citrullus lanatus HOM05D008619 ORTHO05D000090 2.8e-18 97.8 74 62.2
CsaV3_7G027260 Cucumis sativus L. HOM05D008619 ORTHO05D000090 2.8e-18 97.8 73 65.8
MELO3C012708.2 Cucumis melo HOM05D008619 ORTHO05D000090 3.4e-16 90.9 72 63.9
CsaV3_7G022190 Cucumis sativus L. HOM05D008619 ORTHO05D000090 2.2e-15 88.2 72 62.5
Sed0025187 Sechium edule HOM05D008619 ORTHO05D000090 2.9e-15 87.8 68 57.4
Sed0021875 Sechium edule HOM05D008619 ORTHO05D000090 6.5e-15 86.7 214 75.2
CsaV3_7G027240 Cucumis sativus L. HOM05D008619 ORTHO05D000090 8.4e-15 86.3 212 69.8
ClCG09G021760 Citrullus lanatus HOM05D008619 ORTHO05D000090 1.1e-14 85.9 61 63.9
Sed0002057 Sechium edule HOM05D008619 ORTHO05D000090 1.9e-14 85.1 66 54.5
Sed0010182 Sechium edule HOM05D008619 ORTHO05D000090 1.6e-13 82.0 69 52.2
Sed0014525 Sechium edule HOM05D008619 ORTHO05D000090 6.0e-13 80.1 72 54.2
Prupe.8G230100 Prunus persica HOM05D008619 ORTHO05D000090 1.0e-12 79.3 75 49.3
RcHm_v2.0_Chr6g0289221 Rosa chinensis HOM05D000162 ORTHO05D000090 1.0e-12 79.3 66 54.5
RcHm_v2.0_Chr6g0289191 Rosa chinensis HOM05D000162 ORTHO05D000090 1.8e-12 78.6 66 53.0
FAN24G2639 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.3e-12 78.2 66 53.0
FvH4_2g22260 Fragaria vesca HOM05D000162 ORTHO05D000090 8.7e-12 76.3 66 51.5
Sed0014539 Sechium edule HOM05D008619 ORTHO05D000090 8.7e-12 76.3 65 55.4
ClCG00G006240 Citrullus lanatus HOM05D008619 ORTHO05D000090 1.1e-11 75.9 64 56.2
ClCG01G008120 Citrullus lanatus HOM05D008619 ORTHO05D000090 1.1e-11 75.9 64 56.2
MD05G1203800 Malus domestica HOM05D008619 ORTHO05D000090 2.5e-11 74.7 66 50.0
Sed0005043 Sechium edule HOM05D008619 ORTHO05D000090 2.5e-11 74.7 58 56.9
Actinidia33760 Actinidia chinensis HOM05D000162 ORTHO05D000090 7.4e-11 73.2 66 51.5
FAN27G0396 Fragaria x ananassa HOM05D000162 ORTHO05D000090 9.6e-11 72.8 66 48.5
CSS0034526 Camellia sinensis var. sinensis HOM05D008619 ORTHO05D000090 1.6e-10 72.0 66 51.5
CSS0040127 Camellia sinensis var. sinensis HOM05D008619 ORTHO05D000090 1.6e-10 72.0 66 51.5
ClCG01G008220 Citrullus lanatus HOM05D008619 ORTHO05D000090 8.2e-10 69.7 69 49.3
Haze_24551 Corylus avellana HOM05D000162 ORTHO05D000090 8.2e-10 69.7 66 50.0
GSVIVG01000757001 Vitis vinifera HOM05D000162 ORTHO05D000090 8.2e-10 69.7 74 45.9
MELO3C015722.2 Cucumis melo HOM05D008619 ORTHO05D025208 6.9e-09 66.6 53 58.5
Lsat_1_v5_gn_9_9621 Lactuca sativa HOM05D000162 ORTHO05D000090 9.0e-09 66.2 75 44.0
Thecc.01G265100 Theobroma cacao HOM05D008619 ORTHO05D000090 1.5e-08 65.5 77 45.5
Sed0018285 Sechium edule HOM05D008619 ORTHO05D000090 4.5e-08 63.9 63 47.6
Sed0025833 Sechium edule HOM05D008619 ORTHO05D025208 4.5e-08 63.9 60 50.0
vmacro02633 Vaccinium macrocarpon HOM05D008619 ORTHO05D000090 4.5e-08 63.9 58 55.2
Atru.chr6.231 Acer truncatum HOM05D000162 ORTHO05D000090 7.6e-08 63.2 78 38.5
Lj1P60T47 Lonicera japonica HOM05D008619 ORTHO05D000090 7.6e-08 63.2 63 44.4
AUR62011921 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.0e-07 62.8 65 43.1
Hma1.2p1_0172F.1_g076330 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.3e-07 62.4 66 47.0
Nitab4.5_0003279g0010 Nicotiana tabacum HOM05D008619 ORTHO05D000090 1.3e-07 62.4 69 44.9
Sed0014077 Sechium edule HOM05D008619 ORTHO05D000090 1.3e-07 62.4 60 48.3
QL04p081370 Quercus lobata HOM05D000162 ORTHO05D000090 2.2e-07 61.6 66 45.5
ClCG09G021740 Citrullus lanatus HOM05D016535 ORTHO05D000090 2.9e-07 61.2 67 49.3
Ciclev10024138m.g Citrus clementina HOM05D000162 ORTHO05D000090 5.0e-07 60.5 75 42.7
Sed0000927 Sechium edule HOM05D008619 ORTHO05D000090 5.0e-07 60.5 46 56.5
Nn1g02625 Nelumbo nucifera HOM05D000162 ORTHO05D000090 8.4e-07 59.7 70 45.7
PSO017G1775 Papaver somniferum HOM05D000162 ORTHO05D000090 1.1e-06 59.3 67 40.3
Sed0020881 Sechium edule HOM05D008619 ORTHO05D000090 1.1e-06 59.3 55 50.9
Migut.N00243 Erythranthe guttata HOM05D000162 ORTHO05D000090 2.5e-06 58.2 67 37.3
PSO732G0790 Papaver somniferum HOM05D000162 ORTHO05D000090 3.2e-06 57.8 76 39.5
CANSAT78G1348 Cannabis sativa HOM05D000162 ORTHO05D000090 4.2e-06 57.4 66 39.4
Eucgr.K03302 Eucalyptus grandis HOM05D000162 ORTHO05D000090 4.2e-06 57.4 75 42.7
TAR362G0483 Trochodendron aralioides HOM05D000162 ORTHO05D000090 4.2e-06 57.4 67 40.3
Duzib138G1327 Durio zibethinus HOM05D008619 ORTHO05D000090 7.1e-06 56.6 66 40.9
PSO063G6560 Papaver somniferum HOM05D000162 ORTHO05D000090 7.1e-06 56.6 76 38.2
QL03p012973 Quercus lobata HOM05D000162 ORTHO05D000090 7.1e-06 56.6 55 43.6
PSO378G0001 Papaver somniferum HOM05D000162 ORTHO05D000090 9.3e-06 56.2 76 38.2
PSO675G4027 Papaver somniferum HOM05D000162 ORTHO05D000090 9.3e-06 56.2 76 38.2
PSO675G5902 Papaver somniferum HOM05D000162 ORTHO05D000090 9.3e-06 56.2 76 38.2
QL12p042932 Quercus lobata HOM05D000162 ORTHO05D000090 9.3e-06 56.2 66 43.9


User provided reference genes

Program Settings