Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C028897.2 Cucumis melo HOM05D000691 ORTHO05D000378 6.7e-66 253.8 124 100.0
MELO3C022607.2 Cucumis melo HOM05D000691 ORTHO05D000378 4.5e-54 214.5 123 86.2
ClCG02G009810 Citrullus lanatus HOM05D000691 ORTHO05D000378 7.9e-35 150.6 123 59.3
ClCG11G007310 Citrullus lanatus HOM05D000691 ORTHO05D000378 3.1e-31 138.7 123 54.5
MELO3C010396.2 Cucumis melo HOM05D000691 ORTHO05D000378 2.1e-27 125.9 85 75.3
ClCG08G000140 Citrullus lanatus HOM05D000004 ORTHO05D000002 4.0e-26 121.7 105 52.4
ClCG11G009860 Citrullus lanatus HOM05D009337 ORTHO05D000378 1.5e-25 119.8 112 51.8
CsaV3_1G028570 Cucumis sativus L. HOM05D000004 ORTHO05D000002 3.7e-24 115.2 130 46.9
CsaV3_1G031080 Cucumis sativus L. HOM05D000691 ORTHO05D000378 3.7e-24 115.2 130 46.9
ClCG05G013980 Citrullus lanatus HOM05D000691 ORTHO05D000378 8.2e-24 114.0 94 56.4
ClCG02G006140 Citrullus lanatus HOM05D000691 ORTHO05D000378 2.9e-21 105.5 102 57.8
ClCG10G006760 Citrullus lanatus HOM05D000691 ORTHO05D000378 2.6e-17 92.4 95 48.4
Cpa.g.sc202.2 Carica papaya HOM05D000691 ORTHO05D000378 1.2e-14 83.6 120 37.5
Cpa.g.sc76.18 Carica papaya HOM05D000691 ORTHO05D000378 1.5e-12 76.6 88 44.3
CsaV3_UNG240600 Cucumis sativus L. HOM05D000691 ORTHO05D000378 9.4e-12 73.9 52 67.3
THA.LOC109116810 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.2e-11 73.6 122 30.3
FvH4_5g11822 Fragaria vesca HOM05D000691 ORTHO05D000378 1.0e-10 70.5 112 33.9
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 1.0e-10 70.5 112 33.9
FvH4_7g28231 Fragaria vesca HOM05D000004 ORTHO05D000378 1.0e-10 70.5 112 33.9
THA.LOC109117174 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.0e-10 70.5 55 54.5
FvH4_4g34281 Fragaria vesca HOM05D000691 ORTHO05D000378 1.4e-10 70.1 112 33.9
THA.LOC104809135 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.4e-10 70.1 101 32.7
THA.LOC104799996 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 5.2e-10 68.2 121 33.9
FvH4_4g19351 Fragaria vesca HOM05D000691 ORTHO05D000378 5.7e-09 64.7 112 33.9
Manes.S027416 Manihot esculenta HOM05D000691 ORTHO05D000378 7.5e-09 64.3 100 37.0
THA.LOC104807978 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.5e-09 64.3 121 32.2
THA.LOC104806071 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 9.8e-09 63.9 55 45.5
Manes.06G126602 Manihot esculenta HOM05D000691 ORTHO05D000378 1.7e-08 63.2 110 34.5
THA.LOC104816062 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.7e-08 63.2 55 43.6
THA.LOC109116182 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.7e-08 63.2 55 43.6
Manes.S041516 Manihot esculenta HOM05D033829 ORTHO05D000378 2.8e-08 62.4 100 36.0
Manes.S026816 Manihot esculenta HOM05D000691 ORTHO05D000922 4.9e-08 61.6 100 36.0
Oeu060366.1 Olea europaea HOM05D000691 ORTHO05D000378 6.3e-08 61.2 78 38.5
Oeu040999.1 Olea europaea HOM05D000691 ORTHO05D000378 1.1e-07 60.5 88 39.8
Oeu042671.1 Olea europaea HOM05D000691 ORTHO05D000378 1.4e-07 60.1 78 37.2
CAN.G4114.1 Capsicum annuum HOM05D000691 ORTHO05D000378 1.8e-07 59.7 90 33.3
Duzib128G0055 Durio zibethinus HOM05D000691 ORTHO05D000378 1.8e-07 59.7 117 31.6
Gorai.012G165300 Gossypium raimondii HOM05D000691 ORTHO05D000378 3.1e-07 58.9 109 30.3
Oeu003547.2 Olea europaea HOM05D000691 ORTHO05D000378 3.1e-07 58.9 78 37.2
Oeu008153.1 Olea europaea HOM05D000691 ORTHO05D000378 3.1e-07 58.9 78 37.2
HanXRQChr00c0452g0574871 Helianthus annuus HOM05D000691 ORTHO05D000378 4.1e-07 58.5 110 29.1
EL10Ac3g05722 Beta vulgaris HOM05D000691 ORTHO05D000378 5.4e-07 58.2 124 27.4
HanXRQChr10g0280141 Helianthus annuus HOM05D000691 ORTHO05D000378 5.4e-07 58.2 113 31.0
HanXRQChr10g0280631 Helianthus annuus HOM05D000691 ORTHO05D000378 5.4e-07 58.2 113 31.0
Oeu012057.1 Olea europaea HOM05D000691 ORTHO05D000378 5.4e-07 58.2 78 37.2
Oeu021426.1 Olea europaea HOM05D010458 ORTHO05D000378 5.4e-07 58.2 78 35.9
Ah.14g080130 Amaranthus hybridus HOM05D000691 ORTHO05D000378 7.0e-07 57.8 117 31.6
Oeu064387.1 Olea europaea HOM05D000691 ORTHO05D000378 7.0e-07 57.8 113 27.4
CAN.G1226.33 Capsicum annuum HOM05D000004 ORTHO05D000002 9.2e-07 57.4 128 25.8
CAN.G1250.3 Capsicum annuum HOM05D000004 ORTHO05D000002 9.2e-07 57.4 128 25.8
CAN.G801.8 Capsicum annuum HOM05D000004 ORTHO05D000002 9.2e-07 57.4 128 25.8
CAN.G1445.1 Capsicum annuum HOM05D000004 ORTHO05D000002 1.2e-06 57.0 128 25.0
CAN.G55.5 Capsicum annuum HOM05D000004 ORTHO05D000002 1.2e-06 57.0 128 25.0
CAN.G890.31 Capsicum annuum HOM05D000004 ORTHO05D000002 1.2e-06 57.0 128 25.0
Ah.01g013530 Amaranthus hybridus HOM05D000691 ORTHO05D000378 1.6e-06 56.6 87 34.5
CAN.G1036.12 Capsicum annuum HOM05D000691 ORTHO05D000378 2.0e-06 56.2 69 40.6
CAN.G1432.23 Capsicum annuum HOM05D000691 ORTHO05D000378 2.0e-06 56.2 69 40.6
Oeu034951.1 Olea europaea HOM05D000691 ORTHO05D000378 2.7e-06 55.8 78 34.6
Ah.08g209110 Amaranthus hybridus HOM05D000691 ORTHO05D000378 3.5e-06 55.5 116 28.4
Oeu007084.1 Olea europaea HOM05D000691 ORTHO05D000378 3.5e-06 55.5 55 40.0
Oeu016457.1 Olea europaea HOM05D000691 ORTHO05D000378 3.5e-06 55.5 55 40.0
Oeu017935.1 Olea europaea HOM05D000691 ORTHO05D000378 3.5e-06 55.5 54 42.6
Oeu046813.1 Olea europaea HOM05D000691 ORTHO05D000378 3.5e-06 55.5 55 40.0
EL10Ac6g14162 Beta vulgaris HOM05D000691 ORTHO05D000378 4.5e-06 55.1 55 38.2
EL10Ac7g16302 Beta vulgaris HOM05D000691 ORTHO05D000378 4.5e-06 55.1 55 38.2
EL10Ac8g18762 Beta vulgaris HOM05D000691 ORTHO05D000378 4.5e-06 55.1 55 38.2
FvH4_2g15681 Fragaria vesca HOM05D000691 ORTHO05D000378 4.5e-06 55.1 112 27.7
Oeu061428.1 Olea europaea HOM05D000691 ORTHO05D000378 4.5e-06 55.1 78 35.9
Thhalv10023881m.g Eutrema salsugineum HOM05D000691 ORTHO05D000378 5.9e-06 54.7 87 34.5
Oeu003087.1 Olea europaea HOM05D000691 ORTHO05D000378 5.9e-06 54.7 55 40.0
Oeu005833.1 Olea europaea HOM05D000691 ORTHO05D000378 5.9e-06 54.7 107 29.9
Oeu025520.1 Olea europaea HOM05D000691 ORTHO05D000378 5.9e-06 54.7 55 40.0
Oeu027530.1 Olea europaea HOM05D000691 ORTHO05D000378 5.9e-06 54.7 55 40.0
Oeu028951.1 Olea europaea HOM05D000691 ORTHO05D000378 5.9e-06 54.7 55 40.0
Oeu029388.1 Olea europaea HOM05D000691 ORTHO05D000378 5.9e-06 54.7 113 25.7
Oeu030415.1 Olea europaea HOM05D000691 ORTHO05D000378 5.9e-06 54.7 113 26.5
Oeu031614.1 Olea europaea HOM05D010458 ORTHO05D000378 5.9e-06 54.7 78 34.6
Oeu041682.1 Olea europaea HOM05D000691 ORTHO05D000378 5.9e-06 54.7 55 40.0
Oeu048565.1 Olea europaea HOM05D000691 ORTHO05D000378 5.9e-06 54.7 113 27.4
Oeu062087.1 Olea europaea HOM05D000691 ORTHO05D000378 5.9e-06 54.7 55 40.0
Oeu062537.1 Olea europaea HOM05D000691 ORTHO05D000378 5.9e-06 54.7 55 40.0
AUR62012637 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.7e-06 54.3 116 29.3
AUR62023603 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.7e-06 54.3 116 29.3
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.7e-06 54.3 116 29.3
AUR62026905 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.7e-06 54.3 116 29.3
AUR62036876 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.7e-06 54.3 116 29.3
AUR62042054 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.7e-06 54.3 110 30.0
AUR62043025 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.7e-06 54.3 116 29.3
FvH4_4g03471 Fragaria vesca HOM05D000691 ORTHO05D000378 7.7e-06 54.3 55 38.2
Oeu032737.1 Olea europaea HOM05D000691 ORTHO05D000378 7.7e-06 54.3 105 25.7
THA.LOC104803417 Tarenaya hassleriana HOM05D000691 ORTHO05D000378 7.7e-06 54.3 41 56.1


User provided reference genes

Program Settings