Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C028884.2 Cucumis melo HOM05D006834 ORTHO05D008623 6.2e-67 257.3 128 100.0
MELO3C005199.2 Cucumis melo HOM05D006834 ORTHO05D008623 3.6e-38 161.8 108 76.9
CsaV3_5G017580 Cucumis sativus L. HOM05D006834 ORTHO05D008623 1.0e-37 160.2 108 75.9
ClCG01G007130 Citrullus lanatus HOM05D006834 ORTHO05D008623 2.2e-35 152.5 108 72.2
Sed0016094 Sechium edule HOM05D006834 ORTHO05D008623 2.6e-33 145.6 108 70.4
Manes.05G007900 Manihot esculenta HOM05D006834 ORTHO05D008623 1.7e-27 126.3 121 54.5
PGR042G0322 Punica granatum HOM05D006834 ORTHO05D008623 4.8e-27 124.8 119 52.9
Cpa.g.sc57.31 Carica papaya HOM05D006834 ORTHO05D008623 4.1e-26 121.7 108 56.5
GSVIVG01028237001 Vitis vinifera HOM05D006834 ORTHO05D008623 2.6e-25 119.0 120 55.0
Atru.chr5.848 Acer truncatum HOM05D006834 ORTHO05D008623 4.5e-25 118.2 121 49.6
MD09G1291400 Malus domestica HOM05D006834 ORTHO05D008623 1.7e-24 116.3 106 52.8
Ciclev10020225m.g Citrus clementina HOM05D006834 ORTHO05D008623 2.2e-24 115.9 121 52.1
TAR636G0448 Trochodendron aralioides HOM05D006834 ORTHO05D008623 2.2e-24 115.9 121 48.8
Lj1g0008019 Lotus japonicus HOM05D006834 ORTHO05D008623 3.8e-24 115.2 98 56.1
Cfa004921 Carpinus fangiana HOM05D006834 ORTHO05D008623 5.0e-24 114.8 121 49.6
Eucgr.A00997 Eucalyptus grandis HOM05D006834 ORTHO05D008623 5.0e-24 114.8 106 54.7
Gorai.008G133900 Gossypium raimondii HOM05D006834 ORTHO05D008623 5.0e-24 114.8 106 51.9
Gohir.D12G123000 Gossypium hirsutum HOM05D006834 ORTHO05D008623 6.5e-24 114.4 106 51.9
Nn4g25303 Nelumbo nucifera HOM05D006834 ORTHO05D008623 6.5e-24 114.4 121 51.2
Dinv12076 Davidia involucrata HOM05D006834 ORTHO05D008623 1.5e-23 113.2 108 54.6
Thecc.01G326600 Theobroma cacao HOM05D006834 ORTHO05D008623 1.5e-23 113.2 106 51.9
Phvul.001G218900 Phaseolus vulgaris HOM05D006834 ORTHO05D008623 2.5e-23 112.5 108 51.9
Glyma.19G222100 Glycine max HOM05D006834 ORTHO05D008623 3.2e-23 112.1 108 50.9
Gohir.A12G119200 Gossypium hirsutum HOM05D006834 ORTHO05D008623 3.2e-23 112.1 106 50.9
Hma1.2p1_0408F.1_g146240 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 4.2e-23 111.7 108 53.7
VMungo1383G1632 Vigna mungo HOM05D006834 ORTHO05D008623 4.2e-23 111.7 122 46.7
Actinidia21334 Actinidia chinensis HOM05D006834 ORTHO05D008623 7.2e-23 110.9 108 52.8
Haze_05159 Corylus avellana HOM05D006834 ORTHO05D008623 7.2e-23 110.9 121 48.8
Duzib138G0585 Durio zibethinus HOM05D006834 ORTHO05D008623 7.2e-23 110.9 107 50.5
MBI18_g03845_MAGBIO Magnolia biondii HOM05D006834 ORTHO05D008623 2.1e-22 109.4 119 48.7
TWI14G0919 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 2.1e-22 109.4 119 48.7
Lalb_Chr18g0046351 Lupinus albus HOM05D006834 ORTHO05D008623 2.7e-22 109.0 121 48.8
TWI59G0932 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 4.7e-22 108.2 119 47.9
Prupe.3G001500 Prunus persica HOM05D006834 ORTHO05D008623 1.0e-21 107.1 121 47.9
COL.COLO4_23116 Corchorus olitorius HOM05D006834 ORTHO05D008623 2.3e-21 105.9 106 50.0
HanXRQChr06g0167961 Helianthus annuus HOM05D006834 ORTHO05D008623 2.3e-21 105.9 123 46.3
QL12p035081 Quercus lobata HOM05D006834 ORTHO05D008623 2.3e-21 105.9 108 50.0
QL12p035100 Quercus lobata HOM05D006834 ORTHO05D008623 2.3e-21 105.9 108 50.0
PSO761G0283 Papaver somniferum HOM05D006834 ORTHO05D008623 3.0e-21 105.5 121 44.6
Sp5g01290 Schrenkiella parvula HOM05D006834 ORTHO05D008623 3.0e-21 105.5 119 47.9
Sabra02G0148600 Salix brachista HOM05D006834 ORTHO05D008623 4.0e-21 105.1 121 46.3
Ca_09251_v3 Cicer arietinum L. HOM05D006834 ORTHO05D008623 5.2e-21 104.8 121 47.1
Cc01_g21740 Coffea canephora HOM05D006834 ORTHO05D008623 5.2e-21 104.8 108 48.1
Aqoxy2G02436 Aquilegia oxysepala HOM05D006834 ORTHO05D008623 6.7e-21 104.4 109 47.7
Lsat_1_v5_gn_8_167261 Lactuca sativa HOM05D006834 ORTHO05D008623 6.7e-21 104.4 108 50.0
Medtr7g110820 Medicago truncatula HOM05D006834 ORTHO05D008623 6.7e-21 104.4 108 48.1
TPR.G8370 Trifolium pratense HOM05D006834 ORTHO05D008623 6.7e-21 104.4 108 47.2
PSO210G3353 Papaver somniferum HOM05D006834 ORTHO05D008623 8.8e-21 104.0 121 44.6
Potri.002G186100 Populus trichocarpa HOM05D006834 ORTHO05D008623 8.8e-21 104.0 108 48.1
vmacro15952 Vaccinium macrocarpon HOM05D006834 ORTHO05D008623 1.1e-20 103.6 121 47.9
CARHR172420 Cardamine hirsuta HOM05D006834 ORTHO05D008623 1.5e-20 103.2 119 46.2
CiPaw.08G082000 Carya illinoinensis HOM05D006834 ORTHO05D008623 1.5e-20 103.2 121 48.8
THA.LOC104817424 Tarenaya hassleriana HOM05D006834 ORTHO05D008623 1.5e-20 103.2 106 47.2
Aa31LG10G16050 Aethionema arabicum HOM05D006834 ORTHO05D008623 2.6e-20 102.4 119 46.2
BraA09t40830Z Brassica rapa HOM05D006834 ORTHO05D008623 4.4e-20 101.7 119 45.4
Thhalv10005996m.g Eutrema salsugineum HOM05D006834 ORTHO05D008623 4.4e-20 101.7 121 45.5
HPP92_001172 Vanilla planifolia HOM05D006834 ORTHO05D008623 4.4e-20 101.7 123 43.9
A09p54180 Brassica napus HOM05D006834 ORTHO05D008623 7.4e-20 100.9 119 45.4
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 7.4e-20 100.9 123 45.5
AL5G44760 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 9.7e-20 100.5 119 47.1
AL5G44880 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 1.3e-19 100.1 119 46.2
C08p37040 Brassica napus HOM05D006834 ORTHO05D008623 1.7e-19 99.8 119 44.5
DCAR_012294 Daucus carota HOM05D006834 ORTHO05D008623 1.7e-19 99.8 95 54.7
Nitab4.5_0007915g0010 Nicotiana tabacum HOM05D006834 ORTHO05D008623 1.7e-19 99.8 119 45.4
ATR0796G131 Amborella trichopoda HOM05D006834 ORTHO05D008623 4.8e-19 98.2 99 45.5
AT3G62080 Arabidopsis thaliana HOM05D006834 ORTHO05D008623 4.8e-19 98.2 119 46.2
Migut.D01683 Erythranthe guttata HOM05D006834 ORTHO05D008623 4.8e-19 98.2 121 47.1
CANSAT25G0194 Cannabis sativa HOM05D006834 ORTHO05D008623 6.3e-19 97.8 98 53.1
Carub.0005s2883 Capsella rubella HOM05D006834 ORTHO05D008623 6.3e-19 97.8 119 46.2
CDE01G0777 Ceratophyllum demersum HOM05D006834 ORTHO05D008623 6.3e-19 97.8 119 47.9
Sopen01g030580 Solanum pennellii HOM05D006834 ORTHO05D008623 8.2e-19 97.4 119 47.1
Oeu008276.1 Olea europaea HOM05D006834 ORTHO05D008623 1.1e-18 97.1 138 39.9
PGSC0003DMG401001116 Solanum tuberosum HOM05D006834 ORTHO05D008623 1.4e-18 96.7 119 46.2
CAN.G179.29 Capsicum annuum HOM05D006834 ORTHO05D008623 2.4e-18 95.9 119 46.2
BolC8t51281H Brassica oleracea HOM05D006834 ORTHO05D008623 3.1e-18 95.5 119 42.9
Psat3g017400 Pisum sativum HOM05D006834 ORTHO05D008623 3.1e-18 95.5 121 44.6
CSS0011680 Camellia sinensis var. sinensis HOM05D006834 ORTHO05D008623 4.1e-18 95.1 121 45.5
Nitab4.5_0003092g0080 Nicotiana tabacum HOM05D006834 ORTHO05D008623 4.1e-18 95.1 118 44.1
Rhsim01G0000800 Rhododendron simsii HOM05D006834 ORTHO05D008623 5.3e-18 94.7 121 44.6
FvH4_1g26150 Fragaria vesca HOM05D006834 ORTHO05D008623 1.2e-17 93.6 109 43.1
FAN19G1238 Fragaria x ananassa HOM05D006834 ORTHO05D008623 2.0e-17 92.8 109 43.1
FAN26G0527 Fragaria x ananassa HOM05D006834 ORTHO05D008623 2.0e-17 92.8 109 43.1
FAN23G1444 Fragaria x ananassa HOM05D006834 ORTHO05D008623 1.0e-16 90.5 109 42.2
RcHm_v2.0_Chr3g0485641 Rosa chinensis HOM05D006834 ORTHO05D008623 1.0e-16 90.5 109 44.0
MSTRG.21731 Avicennia marina HOM05D006834 ORTHO05D008623 1.9e-15 86.3 121 39.7
SGA_v2.0_scaffold310G48195 Striga asiatica HOM05D006834 ORTHO05D008623 2.5e-15 85.9 124 41.9
Os01g0286000 Oryza sativa ssp. japonica HOM05D006834 ORTHO05D008623 7.2e-15 84.3 97 41.2
Zm00001eb129510 Zea mays HOM05D006834 ORTHO05D008623 2.1e-14 82.8 101 42.6
BcaC07g40700 Brassica carinata HOM05D006834 ORTHO05D008623 6.1e-14 81.3 108 42.6
AUR62001071 Chenopodium quinoa HOM05D006834 ORTHO05D008623 2.6e-12 75.9 109 42.2
AUR62031719 Chenopodium quinoa HOM05D006834 ORTHO05D008623 3.4e-12 75.5 109 41.3
AUR62032606 Chenopodium quinoa HOM05D006834 ORTHO05D008623 4.4e-12 75.1 109 41.3
EL10Ac9g22392 Beta vulgaris HOM05D006834 ORTHO05D008623 1.3e-11 73.6 106 38.7
Ah.12g061380 Amaranthus hybridus HOM05D006834 ORTHO05D008623 1.8e-10 69.7 108 39.8
Pp3c3_29200 Physcomitrium patens HOM05D006834 ORTHO05D008623 1.2e-09 67.0 108 31.5
Peaxi162Scf00309g00622 Petunia axillaris HOM05D006834 ORTHO05D008623 1.5e-07 60.1 80 45.0
arahy.Tifrunner.gnm1.ann1.AJ9Z2K Arachis hypogaea HOM05D006834 ORTHO05D008623 1.9e-07 59.7 107 34.6
arahy.Tifrunner.gnm1.ann1.W0LIHS Arachis hypogaea HOM05D006834 ORTHO05D008623 1.9e-07 59.7 107 34.6
SMO339G0071 Selaginella moellendorffii HOM05D006834 ORTHO05D008623 1.6e-06 56.6 90 32.2


User provided reference genes

Program Settings