Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.2e-163 578.9 299 100.0
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.7e-105 386.0 205 98.5
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.3e-96 356.3 189 98.4
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 8.5e-83 311.2 199 81.4
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 2.4e-77 293.1 208 74.5
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 1.2e-76 290.8 298 55.0
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.5e-74 282.0 216 72.2
MELO3C028434.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.7e-71 271.2 155 91.6
MELO3C029576.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.7e-71 271.2 177 80.8
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.2e-70 270.0 311 53.7
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.2e-70 268.1 296 55.4
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 1.2e-65 254.2 265 55.1
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.4e-47 193.0 202 52.0
MELO3C034299.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.2e-46 190.3 123 92.7
MELO3C029981.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.3e-46 188.7 147 68.0
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 3.1e-45 186.4 211 49.8
MELO3C019328.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.0e-43 181.4 132 81.8
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.4e-39 166.4 205 41.5
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.4e-39 166.4 295 36.6
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.4e-38 162.2 193 42.0
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 4.1e-37 159.5 298 35.6
MELO3C029040.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.0e-35 153.3 86 81.4
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 1.1e-34 151.4 280 34.3
MELO3C033672.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-32 144.8 179 42.5
CANSAT35G0660 Cannabis sativa HOM05D007314 ORTHO05D003768 1.7e-30 137.5 189 40.7
MELO3C030144.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.7e-30 137.5 83 68.7
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 2.2e-30 137.1 90 62.2
MELO3C029411.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.0e-29 132.1 136 50.7
MELO3C032718.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.6e-28 131.0 94 61.7
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 3.5e-28 129.8 85 62.4
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 6.0e-28 129.0 213 39.0
MELO3C029566.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.7e-27 127.5 106 65.1
RcHm_v2.0_Chr3g0492801 Rosa chinensis HOM05D007314 ORTHO05D003768 1.5e-26 124.4 88 59.1
MELO3C032996.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.3e-26 123.2 111 55.0
RcHm_v2.0_Chr5g0059371 Rosa chinensis HOM05D007314 ORTHO05D003768 2.1e-25 120.6 86 59.3
MELO3C035437.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.2e-25 119.0 131 45.8
RcHm_v2.0_Chr7g0200591 Rosa chinensis HOM05D007314 ORTHO05D003768 2.3e-24 117.1 87 52.9
CsaV3_4G009050 Cucumis sativus L. HOM05D007314 ORTHO05D003768 2.0e-23 114.0 84 52.4
FvH4_4g12371 Fragaria vesca HOM05D007314 ORTHO05D003768 4.4e-23 112.8 99 50.5
MELO3C035072.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.7e-22 110.9 64 75.0
ClCG10G008410 Citrullus lanatus HOM05D007314 ORTHO05D003768 2.2e-22 110.5 92 75.0
MELO3C034792.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.7e-22 109.8 70 67.1
MELO3C034816.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.9e-21 107.5 152 46.7
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 3.2e-21 106.7 65 61.5
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 9.2e-21 105.1 201 33.8
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 9.2e-21 105.1 185 34.6
FvH4_4g01311 Fragaria vesca HOM05D007314 ORTHO05D003768 1.6e-20 104.4 91 49.5
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 8.6e-19 98.6 210 30.5
CANSAT25G1818 Cannabis sativa HOM05D007314 ORTHO05D003768 1.5e-18 97.8 132 43.2
MELO3C031186.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.5e-18 97.8 136 47.1
MELO3C028630.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-17 94.7 62 66.1
MELO3C029734.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.4e-16 91.3 61 59.0
FvH4_6g21082 Fragaria vesca HOM05D007314 ORTHO05D003768 1.8e-16 90.9 62 54.8
MELO3C033635.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.1e-16 90.1 48 77.1
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 4.0e-16 89.7 263 29.7
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 5.2e-16 89.4 210 33.3
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 5.2e-16 89.4 323 27.2
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 1.5e-15 87.8 88 42.0
PSO675G7499 Papaver somniferum HOM05D008526 ORTHO05D010380 5.8e-15 85.9 197 27.4
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 9.9e-15 85.1 200 34.0
MELO3C000505.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.2e-14 84.0 40 90.0
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 2.2e-14 84.0 328 25.0
Atru.chr2.2530 Acer truncatum HOM05D001899 ORTHO05D001858 2.9e-14 83.6 114 38.6
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 2.9e-14 83.6 254 28.3
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 3.8e-14 83.2 199 30.2
Sed0016549 Sechium edule HOM05D007314 ORTHO05D003768 3.8e-14 83.2 61 72.1
MELO3C031375.2 Cucumis melo HOM05D008781 ORTHO05D003768 6.4e-14 82.4 96 39.6
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 6.4e-14 82.4 229 29.7
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 6.4e-14 82.4 276 29.3
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.9e-13 80.9 206 30.1
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 3.2e-13 80.1 196 32.7
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 3.2e-13 80.1 193 32.1
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 7.1e-13 79.0 82 41.5
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 9.2e-13 78.6 74 45.9
Aqoxy3G03529 Aquilegia oxysepala HOM05D007314 ORTHO05D003768 2.1e-12 77.4 85 40.0
FvH4_4g10040 Fragaria vesca HOM05D009091 ORTHO05D003768 4.6e-12 76.3 239 28.0
FvH4_5g23172 Fragaria vesca HOM05D008321 ORTHO05D003768 4.6e-12 76.3 211 28.9
PSO675G1909 Papaver somniferum HOM05D008526 ORTHO05D010380 4.6e-12 76.3 127 33.9
BolC2t08290H Brassica oleracea HOM05D007314 ORTHO05D003768 6.0e-12 75.9 91 39.6
Aqoxy5G02986 Aquilegia oxysepala HOM05D007314 ORTHO05D000285 7.8e-12 75.5 129 32.6
FvH4_3g32731 Fragaria vesca HOM05D008321 ORTHO05D003768 1.7e-11 74.3 222 29.3
RcHm_v2.0_Chr5g0060161 Rosa chinensis HOM05D009091 ORTHO05D003768 1.7e-11 74.3 79 44.3
PSO801G0005 Papaver somniferum HOM05D008526 ORTHO05D010380 3.0e-11 73.6 76 40.8
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.9e-11 73.2 188 29.3
FAN21G1044 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.9e-11 73.2 188 29.8
MELO3C032661.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.1e-11 72.8 42 61.9
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 6.6e-11 72.4 220 27.3
Atru.chr4.2623 Acer truncatum HOM05D008321 ORTHO05D003768 8.7e-11 72.0 195 28.2
MELO3C000282.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-10 71.6 35 85.7
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 1.1e-10 71.6 183 29.0
Oeu047507.2 Olea europaea HOM05D007314 ORTHO05D003768 1.1e-10 71.6 144 31.2
FvH4_3g21852 Fragaria vesca HOM05D008321 ORTHO05D003768 1.5e-10 71.2 96 37.5
RcHm_v2.0_Chr7g0177401 Rosa chinensis HOM05D007314 ORTHO05D003768 1.5e-10 71.2 51 54.9
Aqoxy3G00743 Aquilegia oxysepala HOM05D053128 ORTHO05D003768 1.9e-10 70.9 118 33.9
FvH4_6g20172 Fragaria vesca HOM05D008321 ORTHO05D003768 1.9e-10 70.9 73 43.8
Oeu041304.1 Olea europaea HOM05D009091 ORTHO05D003768 1.9e-10 70.9 165 34.5
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 1.9e-10 70.9 73 42.5
PSO339G2614 Papaver somniferum HOM05D008526 ORTHO05D010380 4.3e-10 69.7 281 24.6
ClCG02G008860 Citrullus lanatus HOM05D007314 ORTHO05D003768 5.6e-10 69.3 174 32.2
PSO210G2358 Papaver somniferum HOM05D008526 ORTHO05D010380 7.3e-10 68.9 100 33.0
Aqoxy3G00744 Aquilegia oxysepala HOM05D053128 ORTHO05D003768 9.6e-10 68.6 87 37.9
BolC3t20566H Brassica oleracea HOM05D007314 ORTHO05D003768 9.6e-10 68.6 73 35.6
FvH4_1g29373 Fragaria vesca HOM05D008321 ORTHO05D003768 1.3e-09 68.2 77 41.6
MELO3C032011.2 Cucumis melo HOM05D011747 ORTHO05D014199 2.8e-09 67.0 92 42.4
FAN15G1405 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.8e-09 67.0 91 38.5
Sed0001060 Sechium edule HOM05D007314 ORTHO05D003768 4.8e-09 66.2 75 49.3
FAN07G1302 Fragaria x ananassa HOM05D008321 ORTHO05D003768 8.1e-09 65.5 82 40.2
ClCG08G004820 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.1e-08 65.1 113 38.9
RcHm_v2.0_Chr1g0326261 Rosa chinensis HOM05D009091 ORTHO05D003768 1.4e-08 64.7 63 47.6
BolC2t10485H Brassica oleracea HOM05D007314 ORTHO05D003768 2.4e-08 63.9 87 37.9
MELO3C032453.2 Cucumis melo HOM05D007314 ORTHO05D034924 2.4e-08 63.9 43 51.2
MELO3C033118.2 Cucumis melo HOM05D000539 ORTHO05D000592 4.0e-08 63.2 37 56.8
FAN12G0755 Fragaria x ananassa HOM05D008321 ORTHO05D003768 4.0e-08 63.2 168 28.6
Sed0010248 Sechium edule HOM05D007314 ORTHO05D003768 4.0e-08 63.2 101 39.6
FvH4_4g15580 Fragaria vesca HOM05D003127 ORTHO05D003768 9.0e-08 62.0 153 29.4
FvH4_4g17212 Fragaria vesca HOM05D008321 ORTHO05D003768 1.5e-07 61.2 167 28.7
FAN19G0969 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.5e-07 61.2 168 28.6
Sed0017732 Sechium edule HOM05D007314 ORTHO05D003768 5.8e-07 59.3 65 47.7
CSS0009587 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 7.6e-07 58.9 62 43.5
CSS0011469 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 7.6e-07 58.9 62 43.5
Atru.chr9.1118 Acer truncatum HOM05D007314 ORTHO05D003768 1.3e-06 58.2 61 49.2
Hma1.2p1_0013F.1_g008410 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 1.3e-06 58.2 198 29.8
Oeu040990.1 Olea europaea HOM05D000700 ORTHO05D000397 1.7e-06 57.8 171 29.8
PSO566G0055 Papaver somniferum HOM05D008526 ORTHO05D010380 1.7e-06 57.8 117 25.6
Rhsim04G0083300 Rhododendron simsii HOM05D007314 ORTHO05D010380 2.2e-06 57.4 113 32.7
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 8.4e-06 55.5 165 27.9


User provided reference genes

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